RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 UBQLNLQ8IYU4 475 aa12.87□□□□□ -0.35
CTSA-219ENST00000607841 LILRA2Q8N149 483 aa12.87□□□□□ -0.35
CTSA-219ENST00000607841 SMPDL3BQ92485 455 aa12.87□□□□□ -0.35
CTSA-219ENST00000607841 KLHDC3Q9BQ90 382 aa12.87□□□□□ -0.35
CTSA-219ENST00000607841 PAQR5Q9NXK6 330 aaPredicted RBP12.87□□□□□ -0.35
CTSA-219ENST00000607841 TMEM181Q9P2C4 612 aa12.87□□□□□ -0.35
CTSA-219ENST00000607841 CHST2Q9Y4C5 530 aa12.87□□□□□ -0.35
CTSA-219ENST00000607841 SPIN1Q9Y657 262 aaPredicted RBP12.87□□□□□ -0.35
CTSA-219ENST00000607841 B2RBV5 119 aa12.86□□□□□ -0.35
CTSA-219ENST00000607841 SYT5O00445 386 aa12.86□□□□□ -0.35
CTSA-219ENST00000607841 GSTA4O15217 222 aa12.86□□□□□ -0.35
CTSA-219ENST00000607841 SEC14L5O43304 696 aa12.86□□□□□ -0.35
CTSA-219ENST00000607841 GCM2O75603 506 aaPredicted RBP12.86□□□□□ -0.35
CTSA-219ENST00000607841 EPPINO95925 133 aa12.86□□□□□ -0.35
CTSA-219ENST00000607841 C8BP07358 591 aa12.86□□□□□ -0.35
CTSA-219ENST00000607841 GKN3PP0CG01 181 aa12.86□□□□□ -0.35
CTSA-219ENST00000607841 KDELR2P33947 212 aa12.86□□□□□ -0.35
CTSA-219ENST00000607841 SLC1A3P43003 542 aa12.86□□□□□ -0.35
CTSA-219ENST00000607841 MAP2K6P52564 334 aa12.86□□□□□ -0.35
CTSA-219ENST00000607841 DMTNQ08495 405 aa12.86□□□□□ -0.35
CTSA-219ENST00000607841 ACSF3Q4G176 576 aaPredicted RBP12.86□□□□□ -0.35
CTSA-219ENST00000607841 WBP2NLQ6ICG8 309 aa12.86□□□□□ -0.35
CTSA-219ENST00000607841 C3orf33Q6P1S2 294 aa12.86□□□□□ -0.35
CTSA-219ENST00000607841 RPTNQ6XPR3 784 aa12.86□□□□□ -0.35
CTSA-219ENST00000607841 ESPNLQ6ZVH7 1005 aa12.86□□□□□ -0.35
CTSA-219ENST00000607841 PLEKHM3Q6ZWE6 761 aa12.86□□□□□ -0.35
CTSA-219ENST00000607841 SMYD1Q8NB12 490 aa12.86□□□□□ -0.35
CTSA-219ENST00000607841 TRIB1Q96RU8 372 aa12.86□□□□□ -0.35
CTSA-219ENST00000607841 DMRTA2Q96SC8 542 aa12.86□□□□□ -0.35
CTSA-219ENST00000607841 KCTD14Q9BQ13 255 aaPredicted RBP12.86□□□□□ -0.35
CTSA-219ENST00000607841 TTYH2Q9BSA4 534 aa12.86□□□□□ -0.35
CTSA-219ENST00000607841 CALHM2Q9HA72 323 aa12.86□□□□□ -0.35
CTSA-219ENST00000607841 CLEC18AA5D8T8 446 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 CD8B2A6NJW9 211 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 EIF1AYO14602 144 aaKnown RBP12.85□□□□□ -0.35
CTSA-219ENST00000607841 AP3D1O14617 1153 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 TPST1O60507 370 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 ADAM11O75078 769 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 GMNNO75496 209 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 OPN1SWP03999 348 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 ACAA2P42765 397 aaKnown RBP12.85□□□□□ -0.35
CTSA-219ENST00000607841 KCNJ5P48544 419 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 GSK3BP49841 420 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 POLR2HP52434 150 aaKnown RBP12.85□□□□□ -0.35
CTSA-219ENST00000607841 NCALDP61601 193 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 SLC25A3Q00325 362 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 PMPCAQ10713 525 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 SGCBQ16585 318 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 DUSP7Q16829 419 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 SPATS1Q496A3 300 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 SAMD4BQ5PRF9 694 aaKnown RBP12.85□□□□□ -0.35
CTSA-219ENST00000607841 NSUN5P2Q63ZY6 315 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 CLEC18BQ6UXF7 455 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 LACC1Q8IV20 430 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 CADM2Q8N3J6 435 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 CLEC18CQ8NCF0 446 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 SSC4DQ8WTU2 575 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 SLC25A43Q8WUT9 341 aaPredicted RBP12.85□□□□□ -0.35
CTSA-219ENST00000607841 RND1Q92730 232 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 TAMM41Q96BW9 452 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 CCDC120Q96HB5 630 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 KLHL15Q96M94 604 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 UCN2Q96RP3 112 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 NPAS1Q99742 590 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 TUBA1CQ9BQE3 449 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 TMEM185BQ9H7F4 350 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 TIGARQ9NQ88 270 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 COQ3Q9NZJ6 369 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 BAG5Q9UL15 447 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 USP22Q9UPT9 525 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 FAM215AQ9Y5M1 114 aa12.85□□□□□ -0.35
CTSA-219ENST00000607841 CLCA1A8K7I4 914 aa12.84□□□□□ -0.35
CTSA-219ENST00000607841 CXCR6O00574 342 aa12.84□□□□□ -0.35
CTSA-219ENST00000607841 ADAMDEC1O15204 470 aa12.84□□□□□ -0.35
CTSA-219ENST00000607841 LGI1O95970 557 aa12.84□□□□□ -0.35
CTSA-219ENST00000607841 LDLRP01130 860 aa12.84□□□□□ -0.35
CTSA-219ENST00000607841 GLI4P10075 376 aa12.84□□□□□ -0.35
CTSA-219ENST00000607841 SLC7A1P30825 629 aa12.84□□□□□ -0.35
CTSA-219ENST00000607841 TIMP3P35625 211 aa12.84□□□□□ -0.35
CTSA-219ENST00000607841 CLK1P49759 484 aaKnown RBP12.84□□□□□ -0.35
CTSA-219ENST00000607841 SUCLG1P53597 346 aaKnown RBP12.84□□□□□ -0.35
CTSA-219ENST00000607841 CLDN20P56880 219 aa12.84□□□□□ -0.35
CTSA-219ENST00000607841 RGS8P57771 180 aaPredicted RBP12.84□□□□□ -0.35
CTSA-219ENST00000607841 GLIPR1L2Q4G1C9 344 aa12.84□□□□□ -0.35
CTSA-219ENST00000607841 LRRC23Q53EV4 343 aaPredicted RBP12.84□□□□□ -0.35
CTSA-219ENST00000607841 RTL6Q6ICC9 239 aa12.84□□□□□ -0.35
CTSA-219ENST00000607841 POMZP3Q6PJE2 187 aa12.84□□□□□ -0.35
CTSA-219ENST00000607841 GGNQ86UU5 652 aa12.84□□□□□ -0.35
CTSA-219ENST00000607841 RANBP3LQ86VV4 465 aaPredicted RBP12.84□□□□□ -0.35
CTSA-219ENST00000607841 DEFB107AQ8IZN7 70 aa12.84□□□□□ -0.35
CTSA-219ENST00000607841 ATP6V1C2Q8NEY4 427 aa12.84□□□□□ -0.35
CTSA-219ENST00000607841 OR10Q1Q8NGQ4 319 aa12.84□□□□□ -0.35
CTSA-219ENST00000607841 OR2V1Q8NHB1 315 aa12.84□□□□□ -0.35
CTSA-219ENST00000607841 LZICQ8WZA0 190 aa12.84□□□□□ -0.35
CTSA-219ENST00000607841 FIG4Q92562 907 aa12.84□□□□□ -0.35
CTSA-219ENST00000607841 PROX1Q92786 737 aa12.84□□□□□ -0.35
CTSA-219ENST00000607841 ZNF524Q96C55 264 aa12.84□□□□□ -0.35
CTSA-219ENST00000607841 CDRT15Q96T59 188 aa12.84□□□□□ -0.35
CTSA-219ENST00000607841 TRIM2Q9C040 744 aa12.84□□□□□ -0.35
CTSA-219ENST00000607841 ADAM19Q9H013 955 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms