RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 ANKRD17O75179 2603 aaKnown RBP12.9□□□□□ -0.35
PKNOX1-210ENST00000607049 SPG11Q96JI7 2443 aa12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 NUP214P35658 2090 aaPredicted RBP12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 FAM234BA2RU67 622 aa12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 CGAP01215 116 aa12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 DBIP07108 87 aaKnown RBP12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 ZCCHC18P0CG32 403 aa12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 IL7RP16871 459 aa12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 IL12AP29459 219 aa12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 RYKP34925 604 aa12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 CRATP43155 626 aa12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 HTR3AP46098 478 aa12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 SESN3P58005 492 aa12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 RAC3P60763 192 aa12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 IRX1P78414 480 aaPredicted RBP12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 CHRNEQ04844 493 aa12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 KEAP1Q14145 624 aa12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 GUSBP1Q15486 140 aa12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 TOMM34Q15785 309 aaPredicted RBP12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 AP1ARQ63HQ0 302 aa12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 ZNF474Q6S9Z5 364 aaPredicted RBP12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 EPGNQ6UW88 154 aa12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 FRRS1Q6ZNA5 592 aa12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 FCRLAQ7L513 359 aa12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 MARK4Q96L34 752 aa12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 OR5B2Q96R09 309 aa12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 OR52B2Q96RD2 323 aa12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 NPAS1Q99742 590 aa12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 INPP5KQ9BT40 448 aa12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 VIPAS39Q9H9C1 493 aa12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 ACER3Q9NUN7 267 aa12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 INTS9Q9NV88 658 aaKnown RBP12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 KLHL28Q9NXS3 571 aa12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 KLHL9Q9P2J3 617 aa12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 PRDM4Q9UKN5 801 aa12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 TESMINQ9Y4I5 508 aa12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 TACC2O95359 2948 aa12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 KIAA1549Q9HCM3 1950 aa12.89□□□□□ -0.35
PKNOX1-210ENST00000607049 ETV2O00321 342 aaPredicted RBP12.88□□□□□ -0.35
PKNOX1-210ENST00000607049 DNAJA2O60884 412 aa12.88□□□□□ -0.35
PKNOX1-210ENST00000607049 NTN1O95631 604 aa12.88□□□□□ -0.35
PKNOX1-210ENST00000607049 RAF1P04049 648 aa12.88□□□□□ -0.35
PKNOX1-210ENST00000607049 TFPIP10646 304 aa12.88□□□□□ -0.35
PKNOX1-210ENST00000607049 ENPP1P22413 925 aa12.88□□□□□ -0.35
PKNOX1-210ENST00000607049 PGM1P36871 562 aa12.88□□□□□ -0.35
PKNOX1-210ENST00000607049 CDKN2CP42773 168 aa12.88□□□□□ -0.35
PKNOX1-210ENST00000607049 CRISP3P54108 245 aa12.88□□□□□ -0.35
PKNOX1-210ENST00000607049 ZSWIM7Q19AV6 140 aa12.88□□□□□ -0.35
PKNOX1-210ENST00000607049 DNAJC14Q6Y2X3 702 aaPredicted RBP12.88□□□□□ -0.35
PKNOX1-210ENST00000607049 SPNS3Q6ZMD2 512 aa12.88□□□□□ -0.35
PKNOX1-210ENST00000607049 GRINAQ7Z429 371 aa12.88□□□□□ -0.35
PKNOX1-210ENST00000607049 ZNF440Q8IYI8 595 aa12.88□□□□□ -0.35
PKNOX1-210ENST00000607049 PNPT1Q8TCS8 783 aaKnown RBP12.88□□□□□ -0.35
PKNOX1-210ENST00000607049 RNF128Q8TEB7 428 aa12.88□□□□□ -0.35
PKNOX1-210ENST00000607049 WDR60Q8WVS4 1066 aa12.88□□□□□ -0.35
PKNOX1-210ENST00000607049 ROBO4Q8WZ75 1007 aa12.88□□□□□ -0.35
PKNOX1-210ENST00000607049 CCDC28BQ9BUN5 200 aa12.88□□□□□ -0.35
PKNOX1-210ENST00000607049 HDHD5Q9BXW7 423 aa12.88□□□□□ -0.35
PKNOX1-210ENST00000607049 KLHL13Q9P2N7 655 aa12.88□□□□□ -0.35
PKNOX1-210ENST00000607049 KCNE5Q9UJ90 142 aa12.88□□□□□ -0.35
PKNOX1-210ENST00000607049 ZNF232Q9UNY5 417 aa12.88□□□□□ -0.35
PKNOX1-210ENST00000607049 AGAP5A6NIR3 686 aa12.87□□□□□ -0.35
PKNOX1-210ENST00000607049 SULT2B1O00204 365 aa12.87□□□□□ -0.35
PKNOX1-210ENST00000607049 YES1P07947 543 aa12.87□□□□□ -0.35
PKNOX1-210ENST00000607049 AGTR1P30556 359 aa12.87□□□□□ -0.35
PKNOX1-210ENST00000607049 CLK1P49759 484 aaKnown RBP12.87□□□□□ -0.35
PKNOX1-210ENST00000607049 MAP2K6P52564 334 aa12.87□□□□□ -0.35
PKNOX1-210ENST00000607049 IST1P53990 364 aa12.87□□□□□ -0.35
PKNOX1-210ENST00000607049 DSTNP60981 165 aa12.87□□□□□ -0.35
PKNOX1-210ENST00000607049 PPP2R2AP63151 447 aa12.87□□□□□ -0.35
PKNOX1-210ENST00000607049 LARS2Q15031 903 aaKnown RBP12.87□□□□□ -0.35
PKNOX1-210ENST00000607049 POU4F3Q15319 338 aa12.87□□□□□ -0.35
PKNOX1-210ENST00000607049 MAPK14Q16539 360 aa12.87□□□□□ -0.35
PKNOX1-210ENST00000607049 SYPL1Q16563 259 aa12.87□□□□□ -0.35
PKNOX1-210ENST00000607049 SYT14P1Q58G82 188 aa12.87□□□□□ -0.35
PKNOX1-210ENST00000607049 PAMR1Q6UXH9 720 aa12.87□□□□□ -0.35
PKNOX1-210ENST00000607049 PLEKHM3Q6ZWE6 761 aa12.87□□□□□ -0.35
PKNOX1-210ENST00000607049 OLIG3Q7RTU3 272 aa12.87□□□□□ -0.35
PKNOX1-210ENST00000607049 ANKFN1Q8N957 763 aa12.87□□□□□ -0.35
PKNOX1-210ENST00000607049 FAM71CQ8NEG0 241 aa12.87□□□□□ -0.35
PKNOX1-210ENST00000607049 NRGNQ92686 78 aa12.87□□□□□ -0.35
PKNOX1-210ENST00000607049 WFIKKN1Q96NZ8 548 aa12.87□□□□□ -0.35
PKNOX1-210ENST00000607049 FOXC2Q99958 501 aa12.87□□□□□ -0.35
PKNOX1-210ENST00000607049 USB1Q9BQ65 265 aaKnown RBP12.87□□□□□ -0.35
PKNOX1-210ENST00000607049 KLHDC3Q9BQ90 382 aa12.87□□□□□ -0.35
PKNOX1-210ENST00000607049 RABEP2Q9H5N1 569 aa12.87□□□□□ -0.35
PKNOX1-210ENST00000607049 C12orf49Q9H741 205 aa12.87□□□□□ -0.35
PKNOX1-210ENST00000607049 TPT1P8Q9HAU6 139 aa12.87□□□□□ -0.35
PKNOX1-210ENST00000607049 CCM2LQ9NUG4 571 aaPredicted RBP12.87□□□□□ -0.35
PKNOX1-210ENST00000607049 CHRNA9Q9UGM1 479 aa12.87□□□□□ -0.35
PKNOX1-210ENST00000607049 GPR52Q9Y2T5 361 aa12.87□□□□□ -0.35
PKNOX1-210ENST00000607049 MED12LQ86YW9 2145 aa12.86□□□□□ -0.35
PKNOX1-210ENST00000607049 PDZD2O15018 2839 aa12.86□□□□□ -0.35
PKNOX1-210ENST00000607049 EFNA2O43921 213 aa12.86□□□□□ -0.35
PKNOX1-210ENST00000607049 HRGP04196 525 aa12.86□□□□□ -0.35
PKNOX1-210ENST00000607049 CRYGSP22914 178 aa12.86□□□□□ -0.35
PKNOX1-210ENST00000607049 SHC1P29353 583 aa12.86□□□□□ -0.35
PKNOX1-210ENST00000607049 IDH2P48735 452 aaKnown RBP12.86□□□□□ -0.35
PKNOX1-210ENST00000607049 AQP5P55064 265 aa12.86□□□□□ -0.35
PKNOX1-210ENST00000607049 COPZ1P61923 177 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms