RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 C1orf109Q9NX04 203 aa14.73□□□□□ -0.05
USE1-208ENST00000600970 PTGDR2Q9Y5Y4 395 aa14.73□□□□□ -0.05
USE1-208ENST00000600970 EXOC1LA0A1B0GW35 172 aa14.72□□□□□ -0.05
USE1-208ENST00000600970 CCT8L1PA6NM43 557 aa14.72□□□□□ -0.05
USE1-208ENST00000600970 ESPNB1AK53 854 aa14.72□□□□□ -0.05
USE1-208ENST00000600970 ETV2O00321 342 aaPredicted RBP14.72□□□□□ -0.05
USE1-208ENST00000600970 PGRP06401 933 aa14.72□□□□□ -0.05
USE1-208ENST00000600970 BMP4P12644 408 aa14.72□□□□□ -0.05
USE1-208ENST00000600970 SDC1P18827 310 aa14.72□□□□□ -0.05
USE1-208ENST00000600970 HNF1AP20823 631 aa14.72□□□□□ -0.05
USE1-208ENST00000600970 ATP12AP54707 1039 aa14.72□□□□□ -0.05
USE1-208ENST00000600970 CHRNB3Q05901 458 aa14.72□□□□□ -0.05
USE1-208ENST00000600970 QPRTQ15274 297 aa14.72□□□□□ -0.05
USE1-208ENST00000600970 DCST2Q5T1A1 773 aa14.72□□□□□ -0.05
USE1-208ENST00000600970 CDC73Q6P1J9 531 aa14.72□□□□□ -0.05
USE1-208ENST00000600970 TOR1AIP2Q8NFQ8 470 aa14.72□□□□□ -0.05
USE1-208ENST00000600970 OR5W2Q8NH69 310 aa14.72□□□□□ -0.05
USE1-208ENST00000600970 CLHC1Q8NHS4 586 aa14.72□□□□□ -0.05
USE1-208ENST00000600970 CCT7Q99832 543 aa14.72□□□□□ -0.05
USE1-208ENST00000600970 C1QTNF6Q9BXI9 259 aa14.72□□□□□ -0.05
USE1-208ENST00000600970 TSPYL1Q9H0U9 437 aa14.72□□□□□ -0.05
USE1-208ENST00000600970 EML4Q9HC35 981 aaKnown RBP14.72□□□□□ -0.05
USE1-208ENST00000600970 BAIAP2L1Q9UHR4 511 aa14.72□□□□□ -0.05
USE1-208ENST00000600970 ATP23Q9Y6H3 246 aa14.72□□□□□ -0.05
USE1-208ENST00000600970 PMF1-BGLAPU3KQ54 211 aa14.72□□□□□ -0.05
USE1-208ENST00000600970 IGKV3D-15A0A087WSY6 115 aa14.71□□□□□ -0.05
USE1-208ENST00000600970 NPIPB9F8W1W9 429 aa14.71□□□□□ -0.05
USE1-208ENST00000600970 H3BQF6 201 aa14.71□□□□□ -0.05
USE1-208ENST00000600970 SLC28A1O00337 649 aa14.71□□□□□ -0.05
USE1-208ENST00000600970 WIPF1O43516 503 aa14.71□□□□□ -0.05
USE1-208ENST00000600970 GSTA1P08263 222 aa14.71□□□□□ -0.05
USE1-208ENST00000600970 UROSP10746 265 aa14.71□□□□□ -0.05
USE1-208ENST00000600970 APOBEC3AP31941 199 aaPredicted RBP14.71□□□□□ -0.05
USE1-208ENST00000600970 NR4A2P43354 598 aa14.71□□□□□ -0.05
USE1-208ENST00000600970 DIO1P49895 249 aa14.71□□□□□ -0.05
USE1-208ENST00000600970 PDLIM4P50479 330 aa14.71□□□□□ -0.05
USE1-208ENST00000600970 FOXG1P55316 489 aaPredicted RBP14.71□□□□□ -0.05
USE1-208ENST00000600970 RUNX1T1Q06455 604 aa14.71□□□□□ -0.05
USE1-208ENST00000600970 CBFBQ13951 182 aa14.71□□□□□ -0.05
USE1-208ENST00000600970 SQLEQ14534 574 aa14.71□□□□□ -0.05
USE1-208ENST00000600970 MLC1Q15049 377 aa14.71□□□□□ -0.05
USE1-208ENST00000600970 GABRA6Q16445 453 aa14.71□□□□□ -0.05
USE1-208ENST00000600970 TIGD2Q4W5G0 525 aa14.71□□□□□ -0.05
USE1-208ENST00000600970 ABLIM2Q6H8Q1 611 aa14.71□□□□□ -0.05
USE1-208ENST00000600970 FRMD7Q6ZUT3 714 aa14.71□□□□□ -0.05
USE1-208ENST00000600970 TMCO5AQ8N6Q1 288 aa14.71□□□□□ -0.05
USE1-208ENST00000600970 ZNF614Q8N883 585 aa14.71□□□□□ -0.05
USE1-208ENST00000600970 CCDC126Q96EE4 140 aa14.71□□□□□ -0.05
USE1-208ENST00000600970 MUS81Q96NY9 551 aa14.71□□□□□ -0.05
USE1-208ENST00000600970 FMO2Q99518 471 aa14.71□□□□□ -0.05
USE1-208ENST00000600970 QRSL1Q9H0R6 528 aaKnown RBP14.71□□□□□ -0.05
USE1-208ENST00000600970 TAS2R16Q9NYV7 291 aa14.71□□□□□ -0.05
USE1-208ENST00000600970 NOSIPQ9Y314 301 aaKnown RBP14.71□□□□□ -0.05
USE1-208ENST00000600970 DTNAQ9Y4J8 743 aa14.71□□□□□ -0.05
USE1-208ENST00000600970 TRAF6Q9Y4K3 522 aa14.71□□□□□ -0.05
USE1-208ENST00000600970 KCNE3Q9Y6H6 103 aa14.71□□□□□ -0.05
USE1-208ENST00000600970 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.71□□□□□ -0.058e-8■■■□□ 16.9
USE1-208ENST00000600970 G3V2L1 256 aa14.7□□□□□ -0.06
USE1-208ENST00000600970 NDUFS8O00217 210 aa14.7□□□□□ -0.06
USE1-208ENST00000600970 ZNF264O43296 627 aa14.7□□□□□ -0.06
USE1-208ENST00000600970 EIF4E2O60573 245 aaKnown RBP14.7□□□□□ -0.06
USE1-208ENST00000600970 APEHP13798 732 aaKnown RBP14.7□□□□□ -0.06
USE1-208ENST00000600970 NTF4P34130 210 aa14.7□□□□□ -0.06
USE1-208ENST00000600970 CCR4P51679 360 aa14.7□□□□□ -0.06
USE1-208ENST00000600970 PDK3Q15120 406 aa14.7□□□□□ -0.06
USE1-208ENST00000600970 CLEC6AQ6EIG7 209 aa14.7□□□□□ -0.06
USE1-208ENST00000600970 ZYG11AQ6WRX3 759 aa14.7□□□□□ -0.06
USE1-208ENST00000600970 TMPPEQ6ZT21 453 aa14.7□□□□□ -0.06
USE1-208ENST00000600970 WDR31Q8NA23 367 aa14.7□□□□□ -0.06
USE1-208ENST00000600970 OR2T11Q8NH01 316 aa14.7□□□□□ -0.06
USE1-208ENST00000600970 APH1AQ96BI3 265 aa14.7□□□□□ -0.06
USE1-208ENST00000600970 ARL8AQ96BM9 186 aa14.7□□□□□ -0.06
USE1-208ENST00000600970 C3orf49Q96BT1 292 aa14.7□□□□□ -0.06
USE1-208ENST00000600970 PIMREGQ9BSJ6 248 aa14.7□□□□□ -0.06
USE1-208ENST00000600970 ACTRT3Q9BYD9 372 aa14.7□□□□□ -0.06
USE1-208ENST00000600970 HEATR1Q9H583 2144 aaKnown RBP14.7□□□□□ -0.06
USE1-208ENST00000600970 FKRPQ9H9S5 495 aa14.7□□□□□ -0.06
USE1-208ENST00000600970 ASB6Q9NWX5 421 aa14.7□□□□□ -0.06
USE1-208ENST00000600970 EMC3Q9P0I2 261 aa14.7□□□□□ -0.06
USE1-208ENST00000600970 EMCNQ9ULC0 261 aa14.7□□□□□ -0.06
USE1-208ENST00000600970 PLCE1Q9P212 2302 aa14.7□□□□□ -0.06
USE1-208ENST00000600970 IGHV4-61A0A0C4DH41 118 aa14.69□□□□□ -0.06
USE1-208ENST00000600970 ZNF716A6NP11 495 aa14.69□□□□□ -0.06
USE1-208ENST00000600970 SULT2B1O00204 365 aa14.69□□□□□ -0.06
USE1-208ENST00000600970 ITGA5P08648 1049 aa14.69□□□□□ -0.06
USE1-208ENST00000600970 MYL2P10916 166 aa14.69□□□□□ -0.06
USE1-208ENST00000600970 UBL4AP11441 157 aa14.69□□□□□ -0.06
USE1-208ENST00000600970 ECHS1P30084 290 aa14.69□□□□□ -0.06
USE1-208ENST00000600970 NAA20P61599 178 aa14.69□□□□□ -0.06
USE1-208ENST00000600970 CSNK2A1P68400 391 aaPredicted RBP14.69□□□□□ -0.06
USE1-208ENST00000600970 PHC1P78364 1004 aa14.69□□□□□ -0.06
USE1-208ENST00000600970 SWI5Q1ZZU3 235 aa14.69□□□□□ -0.06
USE1-208ENST00000600970 MST1LQ2TV78 715 aa14.69□□□□□ -0.06
USE1-208ENST00000600970 RFTN2Q52LD8 501 aaPredicted RBP14.69□□□□□ -0.06
USE1-208ENST00000600970 OR7E24Q6IFN5 339 aa14.69□□□□□ -0.06
USE1-208ENST00000600970 SYT10Q6XYQ8 523 aa14.69□□□□□ -0.06
USE1-208ENST00000600970 MTDHQ86UE4 582 aaKnown RBP14.69□□□□□ -0.06
USE1-208ENST00000600970 ADAMTS15Q8TE58 950 aa14.69□□□□□ -0.06
USE1-208ENST00000600970 IFT81Q8WYA0 676 aa14.69□□□□□ -0.06
USE1-208ENST00000600970 MTERF3Q96E29 417 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms