RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 KLHL9Q9P2J3 617 aa14.08□□□□□ -0.16
VRK3-221ENST00000600284 WDR45Q9Y484 360 aa14.08□□□□□ -0.16
VRK3-221ENST00000600284 SETD2Q9BYW2 2564 aaPredicted RBP14.07□□□□□ -0.16
VRK3-221ENST00000600284 TRPC5OSA6NMA1 111 aa14.07□□□□□ -0.16
VRK3-221ENST00000600284 SLCO1B7G3V0H7 640 aa14.07□□□□□ -0.16
VRK3-221ENST00000600284 HDAC3O15379 428 aa14.07□□□□□ -0.16
VRK3-221ENST00000600284 SMPD2O60906 423 aa14.07□□□□□ -0.16
VRK3-221ENST00000600284 SNNO75324 88 aaPredicted RBP14.07□□□□□ -0.16
VRK3-221ENST00000600284 UBTFL6P0CB48 400 aaPredicted RBP14.07□□□□□ -0.16
VRK3-221ENST00000600284 FKBP2P26885 142 aaKnown RBP14.07□□□□□ -0.16
VRK3-221ENST00000600284 CHI3L1P36222 383 aaPredicted RBP14.07□□□□□ -0.16
VRK3-221ENST00000600284 PGM1P36871 562 aa14.07□□□□□ -0.16
VRK3-221ENST00000600284 KHKP50053 298 aa14.07□□□□□ -0.16
VRK3-221ENST00000600284 SESN3P58005 492 aa14.07□□□□□ -0.16
VRK3-221ENST00000600284 KRTAP21-3Q3LHN1 58 aa14.07□□□□□ -0.16
VRK3-221ENST00000600284 TYW3Q6IPR3 259 aaKnown RBP14.07□□□□□ -0.16
VRK3-221ENST00000600284 TNFAIP8L2Q6P589 184 aaPredicted RBP14.07□□□□□ -0.16
VRK3-221ENST00000600284 PRSS57Q6UWY2 283 aa14.07□□□□□ -0.16
VRK3-221ENST00000600284 TFAP2EQ6VUC0 442 aa14.07□□□□□ -0.16
VRK3-221ENST00000600284 NUFIP2Q7Z417 695 aaKnown RBP14.07□□□□□ -0.16
VRK3-221ENST00000600284 GABRG1Q8N1C3 465 aa14.07□□□□□ -0.16
VRK3-221ENST00000600284 ZNF619Q8N2I2 560 aa14.07□□□□□ -0.16
VRK3-221ENST00000600284 FAM71CQ8NEG0 241 aa14.07□□□□□ -0.16
VRK3-221ENST00000600284 ATP6V1C2Q8NEY4 427 aa14.07□□□□□ -0.16
VRK3-221ENST00000600284 SLC25A43Q8WUT9 341 aaPredicted RBP14.07□□□□□ -0.16
VRK3-221ENST00000600284 PMM1Q92871 262 aa14.07□□□□□ -0.16
VRK3-221ENST00000600284 RAB8BQ92930 207 aa14.07□□□□□ -0.16
VRK3-221ENST00000600284 ROPN1LQ96C74 230 aa14.07□□□□□ -0.16
VRK3-221ENST00000600284 HS3ST6Q96QI5 342 aa14.07□□□□□ -0.16
VRK3-221ENST00000600284 SLC35A5Q9BS91 424 aa14.07□□□□□ -0.16
VRK3-221ENST00000600284 UBTD1Q9HAC8 227 aa14.07□□□□□ -0.16
VRK3-221ENST00000600284 AIG1Q9NVV5 245 aa14.07□□□□□ -0.16
VRK3-221ENST00000600284 MARCOQ9UEW3 520 aaPredicted RBP14.07□□□□□ -0.16
VRK3-221ENST00000600284 LIPT1Q9Y234 373 aa14.07□□□□□ -0.16
VRK3-221ENST00000600284 CENPVL1A0A0U1RR11 272 aa14.06□□□□□ -0.16
VRK3-221ENST00000600284 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.06□□□□□ -0.16
VRK3-221ENST00000600284 TMEM120BA0PK00 339 aa14.06□□□□□ -0.16
VRK3-221ENST00000600284 SDHDO14521 159 aa14.06□□□□□ -0.16
VRK3-221ENST00000600284 TMCC2O75069 709 aa14.06□□□□□ -0.16
VRK3-221ENST00000600284 GCM2O75603 506 aaPredicted RBP14.06□□□□□ -0.16
VRK3-221ENST00000600284 CYP7B1O75881 506 aa14.06□□□□□ -0.16
VRK3-221ENST00000600284 ALDOCP09972 364 aaKnown RBP14.06□□□□□ -0.16
VRK3-221ENST00000600284 ENPP1P22413 925 aa14.06□□□□□ -0.16
VRK3-221ENST00000600284 APOBEC1P41238 236 aaKnown RBP14.06□□□□□ -0.16
VRK3-221ENST00000600284 ANXA11P50995 505 aaKnown RBP14.06□□□□□ -0.16
VRK3-221ENST00000600284 CASP9P55211 416 aa14.06□□□□□ -0.16
VRK3-221ENST00000600284 WDR4P57081 412 aaKnown RBP14.06□□□□□ -0.16
VRK3-221ENST00000600284 UFM1P61960 85 aa14.06□□□□□ -0.16
VRK3-221ENST00000600284 CSNK2A1P68400 391 aaPredicted RBP14.06□□□□□ -0.16
VRK3-221ENST00000600284 P2RY6Q15077 328 aa14.06□□□□□ -0.16
VRK3-221ENST00000600284 MAPK14Q16539 360 aa14.06□□□□□ -0.16
VRK3-221ENST00000600284 ATG16L1Q676U5 607 aa14.06□□□□□ -0.16
VRK3-221ENST00000600284 FRRS1Q6ZNA5 592 aa14.06□□□□□ -0.16
VRK3-221ENST00000600284 TMPPEQ6ZT21 453 aa14.06□□□□□ -0.16
VRK3-221ENST00000600284 KRTAP1-3Q8IUG1 177 aa14.06□□□□□ -0.16
VRK3-221ENST00000600284 P3H2Q8IVL5 708 aa14.06□□□□□ -0.16
VRK3-221ENST00000600284 ANKRD42Q8N9B4 389 aa14.06□□□□□ -0.16
VRK3-221ENST00000600284 GLB1L3Q8NCI6 653 aaPredicted RBP14.06□□□□□ -0.16
VRK3-221ENST00000600284 TEX37Q96LM6 180 aa14.06□□□□□ -0.16
VRK3-221ENST00000600284 OR5B2Q96R09 309 aa14.06□□□□□ -0.16
VRK3-221ENST00000600284 PANX1Q96RD7 426 aa14.06□□□□□ -0.16
VRK3-221ENST00000600284 CCL19Q99731 98 aa14.06□□□□□ -0.16
VRK3-221ENST00000600284 PSD2Q9BQI7 771 aa14.06□□□□□ -0.16
VRK3-221ENST00000600284 EXOSC3Q9NQT5 275 aaKnown RBP14.06□□□□□ -0.16
VRK3-221ENST00000600284 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.06□□□□□ -0.16
VRK3-221ENST00000600284 SPIN1Q9Y657 262 aaPredicted RBP14.06□□□□□ -0.16
VRK3-221ENST00000600284 A0A1W2PNR3 127 aa14.05□□□□□ -0.16
VRK3-221ENST00000600284 ZNF724A8MTY0 619 aa14.05□□□□□ -0.16
VRK3-221ENST00000600284 HMGN4O00479 90 aa14.05□□□□□ -0.16
VRK3-221ENST00000600284 CYTIPO60759 359 aa14.05□□□□□ -0.16
VRK3-221ENST00000600284 PGRP06401 933 aa14.05□□□□□ -0.16
VRK3-221ENST00000600284 MAGEA8P43361 318 aa14.05□□□□□ -0.16
VRK3-221ENST00000600284 CLK1P49759 484 aaKnown RBP14.05□□□□□ -0.16
VRK3-221ENST00000600284 KCNJ10P78508 379 aa14.05□□□□□ -0.16
VRK3-221ENST00000600284 HPCAP84074 193 aa14.05□□□□□ -0.16
VRK3-221ENST00000600284 RASGEF1BQ0VAM2 473 aa14.05□□□□□ -0.16
VRK3-221ENST00000600284 FUT5Q11128 374 aa14.05□□□□□ -0.16
VRK3-221ENST00000600284 MERTKQ12866 999 aa14.05□□□□□ -0.16
VRK3-221ENST00000600284 SFRP5Q5T4F7 317 aa14.05□□□□□ -0.16
VRK3-221ENST00000600284 PLEKHM3Q6ZWE6 761 aa14.05□□□□□ -0.16
VRK3-221ENST00000600284 OLIG3Q7RTU3 272 aa14.05□□□□□ -0.16
VRK3-221ENST00000600284 BIVMQ86UB2 503 aa14.05□□□□□ -0.16
VRK3-221ENST00000600284 CMIPQ8IY22 773 aa14.05□□□□□ -0.16
VRK3-221ENST00000600284 HSD17B8Q92506 261 aa14.05□□□□□ -0.16
VRK3-221ENST00000600284 C18orf12Q96KH6 178 aa14.05□□□□□ -0.16
VRK3-221ENST00000600284 TRNT1Q96Q11 434 aaKnown RBP14.05□□□□□ -0.16
VRK3-221ENST00000600284 OR52E6Q96RD3 313 aa14.05□□□□□ -0.16
VRK3-221ENST00000600284 ZBTB18Q99592 522 aa14.05□□□□□ -0.16
VRK3-221ENST00000600284 TMEM204Q9BSN7 226 aa14.05□□□□□ -0.16
VRK3-221ENST00000600284 QRSL1Q9H0R6 528 aaKnown RBP14.05□□□□□ -0.16
VRK3-221ENST00000600284 ING1Q9UK53 422 aaPredicted RBP14.05□□□□□ -0.16
VRK3-221ENST00000600284 PRDM4Q9UKN5 801 aa14.05□□□□□ -0.16
VRK3-221ENST00000600284 GPR45Q9Y5Y3 372 aa14.05□□□□□ -0.16
VRK3-221ENST00000600284 HEATR5AQ86XA9 2040 aa14.04□□□□□ -0.16
VRK3-221ENST00000600284 CCDC154A6NI56 674 aa14.04□□□□□ -0.16
VRK3-221ENST00000600284 SULT2B1O00204 365 aa14.04□□□□□ -0.16
VRK3-221ENST00000600284 DIAPH2O60879 1101 aa14.04□□□□□ -0.16
VRK3-221ENST00000600284 H6PDO95479 791 aa14.04□□□□□ -0.16
VRK3-221ENST00000600284 CNOT4O95628 575 aaKnown RBP14.04□□□□□ -0.16
VRK3-221ENST00000600284 IL6P05231 212 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms