RNA–Protein interactions for RNA: ENST00000598346.5

FARP1-223, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-223	ENST00000598346	OR1D4	P47884	311 aa		4.36	□□□□□ -1.71
FARP1-223	ENST00000598346	KRTAP10-12	P60413	245 aa		4.36	□□□□□ -1.71
FARP1-223	ENST00000598346	RPS6	P62753	249 aa	Known RBP	4.36	□□□□□ -1.71
FARP1-223	ENST00000598346	PNOC	Q13519	176 aa		4.36	□□□□□ -1.71
FARP1-223	ENST00000598346	TFDP1	Q14186	410 aa		4.36	□□□□□ -1.71
FARP1-223	ENST00000598346	TIMM50	Q3ZCQ8	353 aa		4.36	□□□□□ -1.71
FARP1-223	ENST00000598346	SLC25A30	Q5SVS4	291 aa		4.36	□□□□□ -1.71
FARP1-223	ENST00000598346	KRTAP5-1	Q6L8H4	278 aa		4.36	□□□□□ -1.71
FARP1-223	ENST00000598346	SLC39A4	Q6P5W5	647 aa		4.36	□□□□□ -1.71
FARP1-223	ENST00000598346	ARSK	Q6UWY0	536 aa		4.36	□□□□□ -1.71
FARP1-223	ENST00000598346	BLID	Q8IZY5	108 aa		4.36	□□□□□ -1.71
FARP1-223	ENST00000598346	MNS1	Q8NEH6	495 aa		4.36	□□□□□ -1.71
FARP1-223	ENST00000598346	VN1R17P	Q8TDU5	208 aa		4.36	□□□□□ -1.71
FARP1-223	ENST00000598346	TAF4B	Q92750	862 aa		4.36	□□□□□ -1.71
FARP1-223	ENST00000598346	DCPS	Q96C86	337 aa	Known RBP	4.36	□□□□□ -1.71
FARP1-223	ENST00000598346	C6orf50	Q9HD87	102 aa		4.36	□□□□□ -1.71
FARP1-223	ENST00000598346	C1orf123	Q9NWV4	160 aa		4.36	□□□□□ -1.71
FARP1-223	ENST00000598346	ATP6V1H	Q9UI12	483 aa		4.36	□□□□□ -1.71
FARP1-223	ENST00000598346	RWDD2A	Q9UIY3	292 aa		4.36	□□□□□ -1.71
FARP1-223	ENST00000598346	ABCB11	O95342	1321 aa		4.36	□□□□□ -1.71
FARP1-223	ENST00000598346	CEP290	O15078	2479 aa		4.35	□□□□□ -1.71
FARP1-223	ENST00000598346		A0A1W2PQ72	361 aa		4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	EFCAB7	A8K855	629 aa		4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	ERI2	A8K979	691 aa	Known RBP	4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	TM9SF1	O15321	606 aa		4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	ATP8B1	O43520	1251 aa		4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	LANCL1	O43813	399 aa		4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	BBOX1	O75936	387 aa		4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	GJB5	O95377	273 aa		4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	ALPI	P09923	528 aa		4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	GCFC2	P16383	781 aa	Known RBP	4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	SDC1	P18827	310 aa		4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	PAX2	Q02962	417 aa		4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	NCBP1	Q09161	790 aa	Known RBP	4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	SCGB2A2	Q13296	93 aa		4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	UBE2V2	Q15819	145 aa		4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	ZNF239	Q16600	458 aa	Known RBP	4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	CYBRD1	Q53TN4	286 aa		4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	ATAD3C	Q5T2N8	411 aa		4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	LGSN	Q5TDP6	509 aa		4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	ZNF658	Q5TYW1	1059 aa	Predicted RBP	4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	SPINK14	Q6IE38	97 aa		4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	BTNL3	Q6UXE8	466 aa		4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	GCNT7	Q6ZNI0	430 aa		4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	CATSPER4	Q7RTX7	472 aa		4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	ERAS	Q7Z444	233 aa		4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	EFCAB13	Q8IY85	973 aa		4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	CCDC110	Q8TBZ0	833 aa		4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	TADA1	Q96BN2	335 aa		4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	FICD	Q9BVA6	458 aa		4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	TBC1D10A	Q9BXI6	508 aa		4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	MEPE	Q9NQ76	525 aa	Predicted RBP	4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	RSPH14	Q9UHP6	348 aa		4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	ZNF107	Q9UII5	783 aa	Predicted RBP	4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	AURKC	Q9UQB9	309 aa		4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	GAK	O14976	1311 aa		4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	GRIN2D	O15399	1336 aa		4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	COL2A1	P02458	1487 aa	Predicted RBP	4.35	□□□□□ -1.71
FARP1-223	ENST00000598346	LOXHD1	Q8IVV2	1947 aa		4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	WASH3P	C4AMC7	463 aa		4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	ERLIN1	O75477	346 aa		4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	SRSF10	O75494	262 aa	Known RBP	4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	UFL1	O94874	794 aa		4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	PLEKHA8P1	O95397	391 aa		4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	THY1	P04216	161 aa		4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	IGFBP1	P08833	259 aa	Predicted RBP	4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	CT45A10	P0DMU9	189 aa		4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	DPP4	P27487	766 aa		4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	AXL	P30530	894 aa		4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	ADRA1A	P35348	466 aa		4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	PTGFR	P43088	359 aa		4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	ALDH3B2	P48448	385 aa		4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	NAPA	P54920	295 aa		4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	DYNLL1	P63167	89 aa	Known RBP	4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	PRKCE	Q02156	737 aa		4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	TTC31	Q49AM3	519 aa	Predicted RBP	4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	WASH2P	Q6VEQ5	465 aa		4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	PARG	Q86W56	976 aa		4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	KRT222	Q8N1A0	295 aa		4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	CEP112	Q8N8E3	955 aa		4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	PAGE5	Q96GU1	130 aa		4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	ELMO2	Q96JJ3	720 aa		4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	VSTM2L	Q96N03	204 aa		4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	NUP58	Q9BVL2	599 aa		4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	HCAR1	Q9BXC0	346 aa		4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	TSGA10	Q9BZW7	698 aa		4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	COA1	Q9GZY4	146 aa		4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	GPN2	Q9H9Y4	310 aa	Predicted RBP	4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	LPAR2	Q9HBW0	351 aa		4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	POLE3	Q9NRF9	147 aa		4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	NAALAD2	Q9Y3Q0	740 aa		4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	MMP24	Q9Y5R2	645 aa		4.34	□□□□□ -1.71
FARP1-223	ENST00000598346		U3KQV3	271 aa		4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	COL4A1	P02462	1669 aa		4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	RALGAPA1	Q6GYQ0	2036 aa		4.34	□□□□□ -1.71
FARP1-223	ENST00000598346	MYH4	Q9Y623	1939 aa		4.33	□□□□□ -1.72
FARP1-223	ENST00000598346	LRRC30	A6NM36	301 aa		4.33	□□□□□ -1.72
FARP1-223	ENST00000598346		G3V3Y1	287 aa		4.33	□□□□□ -1.72
FARP1-223	ENST00000598346	CASK	O14936	926 aa		4.33	□□□□□ -1.72
FARP1-223	ENST00000598346	PPIH	O43447	177 aa	Known RBP	4.33	□□□□□ -1.72

Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms