RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 TRIM13O60858 407 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 SYNGR4O95473 234 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 C6orf47O95873 294 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 CD3EP07766 207 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 NGFRP08138 427 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 LINGO3P0C6S8 592 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 PPP3CBP16298 524 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 EDNRAP25101 427 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 ZFP36P26651 326 aaKnown RBP6.54□□□□□ -1.36
VAT1-209ENST00000592388 SOAT1P35610 550 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 NAA20P61599 178 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 RAC1P63000 192 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 POU6F2P78424 691 aaPredicted RBP6.54□□□□□ -1.36
VAT1-209ENST00000592388 FGFBP1Q14512 234 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 UGT3A2Q3SY77 523 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 VPS26BQ4G0F5 336 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 XKR7Q5GH72 579 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 ARL13AQ5H913 290 aaPredicted RBP6.54□□□□□ -1.36
VAT1-209ENST00000592388 RNF165Q6ZSG1 346 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 ESPNLQ6ZVH7 1005 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 NUFIP2Q7Z417 695 aaKnown RBP6.54□□□□□ -1.36
VAT1-209ENST00000592388 CLEC4FQ8N1N0 589 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 ZNF619Q8N2I2 560 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 ZNF614Q8N883 585 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 ATP6V1C2Q8NEY4 427 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 KBTBD8Q8NFY9 601 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 OR5D16Q8NGK9 328 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 B4GALNT2Q8NHY0 566 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 PHOSPHO1Q8TCT1 267 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 RNF128Q8TEB7 428 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 ZBTB8AQ96BR9 441 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 METTL2AQ96IZ6 378 aaKnown RBP6.54□□□□□ -1.36
VAT1-209ENST00000592388 KLHL15Q96M94 604 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 BTBD2Q9BX70 525 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 CACNG6Q9BXT2 260 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 SERHL2Q9H4I8 314 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 METTL17Q9H7H0 456 aaPredicted RBP6.54□□□□□ -1.36
VAT1-209ENST00000592388 COQ10BQ9H8M1 238 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 ANKZF1Q9H8Y5 726 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 UBQLN4Q9NRR5 601 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 ACSS1Q9NUB1 689 aaPredicted RBP6.54□□□□□ -1.36
VAT1-209ENST00000592388 TMEFF2Q9UIK5 374 aaPredicted RBP6.54□□□□□ -1.36
VAT1-209ENST00000592388 MID2Q9UJV3 735 aa6.54□□□□□ -1.36
VAT1-209ENST00000592388 MCTS1Q9ULC4 181 aaKnown RBP6.54□□□□□ -1.36
VAT1-209ENST00000592388 TRIM77I1YAP6 450 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 ADAMDEC1O15204 470 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 NPHS1O60500 1241 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 PEX11AO75192 247 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 GCM2O75603 506 aaPredicted RBP6.53□□□□□ -1.36
VAT1-209ENST00000592388 SLU7O95391 586 aaKnown RBP6.53□□□□□ -1.36
VAT1-209ENST00000592388 NUDT14O95848 222 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 CHEK2O96017 543 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 TUBBP07437 444 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 HPGDP15428 266 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 PRKCAP17252 672 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 ASMTP46597 345 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 CCR4P51679 360 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 LGALS3BPQ08380 585 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 RAB35Q15286 201 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 SPDYE7PQ495Y7 208 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 DCST2Q5T1A1 773 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 LRIG3Q6UXM1 1119 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 TFAP2EQ6VUC0 442 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 RINLQ6ZS11 566 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 TRABD2AQ86V40 505 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 TUSC5Q8IXB3 177 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 CLECL1Q8IZS7 167 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 LILRA2Q8N149 483 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 TMCO5AQ8N6Q1 288 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 OR6Y1Q8NGX8 325 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 RFWD2Q8NHY2 731 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 FBXO27Q8NI29 283 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 TCP10LQ8TDR4 215 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 ACTRT2Q8TDY3 377 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 OSTF1Q92882 214 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 MRPL24Q96A35 216 aaKnown RBP6.53□□□□□ -1.36
VAT1-209ENST00000592388 S100PBPQ96BU1 408 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 ZBTB9Q96C00 473 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 DNAJA3Q96EY1 480 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 PPP1R36Q96LQ0 422 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 STACQ99469 402 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 TACO1Q9BSH4 297 aaKnown RBP6.53□□□□□ -1.36
VAT1-209ENST00000592388 SOX7Q9BT81 388 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 TRMOQ9BU70 441 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 RBM4Q9BWF3 364 aaKnown RBP6.53□□□□□ -1.36
VAT1-209ENST00000592388 IQCGQ9H095 443 aaKnown RBP6.53□□□□□ -1.36
VAT1-209ENST00000592388 PIGUQ9H490 435 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 PLSCR4Q9NRQ2 329 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 GPATCH2Q9NW75 528 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 MKS1Q9NXB0 559 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 CISD1Q9NZ45 108 aaKnown RBP6.53□□□□□ -1.36
VAT1-209ENST00000592388 KLHL13Q9P2N7 655 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 ATP6V1HQ9UI12 483 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 ZDHHC2Q9UIJ5 367 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 CARD8Q9Y2G2 431 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 TMED5Q9Y3A6 229 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 TRAF6Q9Y4K3 522 aa6.53□□□□□ -1.36
VAT1-209ENST00000592388 EPPK1P58107 5090 aaKnown RBP6.52□□□□□ -1.36
VAT1-209ENST00000592388 IGHV4-61A0A0C4DH41 118 aa6.52□□□□□ -1.37
VAT1-209ENST00000592388 A0A1W2PNR3 127 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms