RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 MRPL48Q96GC5 212 aaKnown RBP6.85□□□□□ -1.31
ZNF540-206ENST00000589117 IFT27Q9BW83 186 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 HDHD5Q9BXW7 423 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 DPH1Q9BZG8 443 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 TWSG1Q9GZX9 223 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 C6orf106Q9H6K1 298 aaPredicted RBP6.85□□□□□ -1.31
ZNF540-206ENST00000589117 CMC2Q9NRP2 79 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.85□□□□□ -1.31
ZNF540-206ENST00000589117 COMMD3Q9UBI1 195 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 PIAS3Q9Y6X2 628 aa6.85□□□□□ -1.31
ZNF540-206ENST00000589117 GOLGA4Q13439 2230 aaKnown RBP6.84□□□□□ -1.31
ZNF540-206ENST00000589117 A0A1W2PQ09 198 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 TTC36A6NLP5 189 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 ZNF891A8MT65 544 aaPredicted RBP6.84□□□□□ -1.31
ZNF540-206ENST00000589117 C12orf71A8MTZ7 269 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 H3BQ06 376 aaPredicted RBP6.84□□□□□ -1.31
ZNF540-206ENST00000589117 GABRPO00591 440 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 CYR61O00622 381 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 CDC42EP2O14613 210 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 SEC14L5O43304 696 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 CHP2O43745 196 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 FGF17O60258 216 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 PRKAR1AP10644 381 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 HK1P19367 917 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 DRD5P21918 477 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 HTR3AP46098 478 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 SLC16A1P53985 500 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 PSMD4P55036 377 aaKnown RBP6.84□□□□□ -1.31
ZNF540-206ENST00000589117 CTBP2P56545 445 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 RAB38P57729 211 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 VSX2P58304 361 aaPredicted RBP6.84□□□□□ -1.31
ZNF540-206ENST00000589117 STX4Q12846 297 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 ZNF155Q12901 538 aaPredicted RBP6.84□□□□□ -1.31
ZNF540-206ENST00000589117 GALEQ14376 348 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 TAB1Q15750 504 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 ZNF79Q15937 498 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 PRICKLE4Q2TBC4 344 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 KLHL12Q53G59 568 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 CCNJQ5T5M9 372 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 PLBD1Q6P4A8 553 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 PLET1Q6UQ28 207 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 SHFQ7M4L6 423 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 OAFQ86UD1 273 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 MARCH9Q86YJ5 346 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 KLBQ86Z14 1044 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 GRAMD2AQ8IUY3 354 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 ZNF485Q8NCK3 441 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 ADAMTS18Q8TE60 1221 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 ZNF578Q96N58 590 aaPredicted RBP6.84□□□□□ -1.31
ZNF540-206ENST00000589117 LRFN5Q96NI6 719 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 G6PC3Q9BUM1 346 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 S1PR5Q9H228 398 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 SYNPO2LQ9H987 977 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 HINT3Q9NQE9 182 aaKnown RBP6.84□□□□□ -1.31
ZNF540-206ENST00000589117 RPS6KB2Q9UBS0 482 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 TBC1D24Q9ULP9 559 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 SLC35A3Q9Y2D2 325 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 NTNG1Q9Y2I2 539 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 TCRBV21S2A2A0A5A6 115 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 HTR3EA5X5Y0 456 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 ZNF860A6NHJ4 632 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 CENPXA8MT69 81 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 ADARB2-AS1A8MUL3 147 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 SRPX2O60687 465 aaPredicted RBP6.84□□□□□ -1.31
ZNF540-206ENST00000589117 NKX2-2O95096 273 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 SERPINA3P01011 423 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 THY1P04216 161 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 GKN3PP0CG01 181 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 PEPDP12955 493 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 SPNP16150 400 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 MYL9P24844 172 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 AZGP1P25311 298 aaKnown RBP6.84□□□□□ -1.31
ZNF540-206ENST00000589117 SLC6A6P31641 620 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 MTNR1BP49286 362 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 CCR5P51681 352 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 SHC2P98077 582 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 ID2Q02363 134 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 BIKQ13323 160 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 HTR4Q13639 388 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 IL18Q14116 193 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 QPRTQ15274 297 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 CARTPTQ16568 116 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 BAK1Q16611 211 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 LRIT3Q3SXY7 679 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 SLC35F1Q5T1Q4 408 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 GARNL3Q5VVW2 1013 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 NIPAL3Q6P499 406 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 PAMR1Q6UXH9 720 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 TPRA1Q86W33 373 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 Q8N402 240 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 RPLP0P6Q8NHW5 317 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 CTHRC1Q96CG8 243 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 TEAD3Q99594 435 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 PRSS27Q9BQR3 290 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 ALG8Q9BVK2 526 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 OR2B2Q9GZK3 357 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 SEMA6CQ9H3T2 930 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 IL21RQ9HBE5 538 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 INIPQ9NRY2 104 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 DDX28Q9NUL7 540 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms