RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 TMCO5AQ8N6Q1 288 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 GATSQ8NAP1 163 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 TEX47Q8TBZ9 253 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 TRUB1Q8WWH5 349 aaKnown RBP11.04□□□□□ -0.64
CCBE1-203ENST00000589116 TTC9Q92623 222 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 TMCO6Q96DC7 493 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 DEFB126Q9BYW3 111 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 PRRG3Q9BZD7 231 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 CNIH4Q9P003 139 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 HEATR5AQ86XA9 2040 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 C21orf140B9A014 251 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 WWP2O00308 870 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 SOCS6O14544 535 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 MRPS14O60783 128 aaKnown RBP11.04□□□□□ -0.64
CCBE1-203ENST00000589116 WBP4O75554 376 aaKnown RBP11.04□□□□□ -0.64
CCBE1-203ENST00000589116 FTH1P19P0C7X4 201 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 GABRB1P18505 474 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 EEF1B2P24534 225 aaKnown RBP11.04□□□□□ -0.64
CCBE1-203ENST00000589116 SMSP52788 366 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 CDH15P55291 814 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 RPS15P62841 145 aaKnown RBP11.04□□□□□ -0.64
CCBE1-203ENST00000589116 SSPNQ14714 243 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 FAM69BQ5VUD6 431 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 RPL13AP3Q6NVV1 102 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 CASP12Q6UXS9 341 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 ZNF620Q6ZNG0 422 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 TMPRSS11FQ6ZWK6 438 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 NDUFAF7Q7L592 441 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 NUP54Q7Z3B4 507 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 NLGN4XQ8N0W4 816 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 BPIFB6Q8NFQ5 453 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 OR11G2Q8NGC1 345 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 RNF217Q8TC41 542 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 RNF138Q8WVD3 245 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 APH1BQ8WW43 257 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 OSTF1Q92882 214 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 HGDQ93099 445 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 SLC19A3Q9BZV2 496 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 FAM192AQ9GZU8 254 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 LIN28AQ9H9Z2 209 aaKnown RBP11.04□□□□□ -0.64
CCBE1-203ENST00000589116 C12orf10Q9HB07 376 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 HHATLQ9HCP6 504 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 CCNB1IP1Q9NPC3 277 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 RASSF1Q9NS23 344 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 PLCXD1Q9NUJ7 323 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 IL20Q9NYY1 176 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 NDUFA13Q9P0J0 144 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 FOXJ2Q9P0K8 574 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 FARSAQ9Y285 508 aaKnown RBP11.04□□□□□ -0.64
CCBE1-203ENST00000589116 CARD8Q9Y2G2 431 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 CDH10Q9Y6N8 788 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 MAST4O15021 2626 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 SDK2Q58EX2 2172 aa11.04□□□□□ -0.64
CCBE1-203ENST00000589116 A0A087WUJ7 227 aa11.03□□□□□ -0.64
CCBE1-203ENST00000589116 NSG1A0A0A6YYJ2 146 aa11.03□□□□□ -0.64
CCBE1-203ENST00000589116 SMIM31A0A1B0GVY4 71 aa11.03□□□□□ -0.64
CCBE1-203ENST00000589116 SH3D21A4FU49 640 aa11.03□□□□□ -0.64
CCBE1-203ENST00000589116 HCRTR2O43614 444 aa11.03□□□□□ -0.64
CCBE1-203ENST00000589116 NTN1O95631 604 aa11.03□□□□□ -0.64
CCBE1-203ENST00000589116 IGF2P01344 180 aa11.03□□□□□ -0.64
CCBE1-203ENST00000589116 FBXO45P0C2W1 286 aa11.03□□□□□ -0.64
CCBE1-203ENST00000589116 PNMTP11086 282 aa11.03□□□□□ -0.64
CCBE1-203ENST00000589116 IFI30P13284 250 aa11.03□□□□□ -0.64
CCBE1-203ENST00000589116 CSRP1P21291 193 aaKnown RBP11.03□□□□□ -0.64
CCBE1-203ENST00000589116 FMO3P31513 532 aa11.03□□□□□ -0.64
CCBE1-203ENST00000589116 GPR4P46093 362 aa11.03□□□□□ -0.64
CCBE1-203ENST00000589116 GIPRP48546 466 aa11.03□□□□□ -0.64
CCBE1-203ENST00000589116 CCR4P51679 360 aa11.03□□□□□ -0.64
CCBE1-203ENST00000589116 SNRPGP62308 76 aaKnown RBP11.03□□□□□ -0.64
CCBE1-203ENST00000589116 CDK5Q00535 292 aa11.03□□□□□ -0.64
CCBE1-203ENST00000589116 ZNF117Q03924 483 aa11.03□□□□□ -0.64
CCBE1-203ENST00000589116 TMEM236Q5W0B7 351 aa11.03□□□□□ -0.64
CCBE1-203ENST00000589116 SLC27A4Q6P1M0 643 aa11.03□□□□□ -0.64
CCBE1-203ENST00000589116 CBLN3Q6UW01 205 aa11.03□□□□□ -0.64
CCBE1-203ENST00000589116 MRGPREQ86SM8 312 aa11.03□□□□□ -0.64
CCBE1-203ENST00000589116 KIF18BQ86Y91 864 aa11.03□□□□□ -0.64
CCBE1-203ENST00000589116 SLC43A2Q8N370 569 aa11.03□□□□□ -0.64
CCBE1-203ENST00000589116 NLGN4YQ8NFZ3 816 aaPredicted RBP11.03□□□□□ -0.64
CCBE1-203ENST00000589116 OR8J1Q8NGP2 316 aa11.03□□□□□ -0.64
CCBE1-203ENST00000589116 THAP3Q8WTV1 239 aaPredicted RBP11.03□□□□□ -0.64
CCBE1-203ENST00000589116 IPCEF1Q8WWN9 437 aaPredicted RBP11.03□□□□□ -0.64
CCBE1-203ENST00000589116 C3orf49Q96BT1 292 aa11.03□□□□□ -0.64
CCBE1-203ENST00000589116 BPIFA2Q96DR5 249 aa11.03□□□□□ -0.64
CCBE1-203ENST00000589116 TEX12Q9BXU0 123 aa11.03□□□□□ -0.64
CCBE1-203ENST00000589116 GPR87Q9BY21 358 aa11.03□□□□□ -0.64
CCBE1-203ENST00000589116 ZBTB20Q9HC78 741 aaPredicted RBP11.03□□□□□ -0.64
CCBE1-203ENST00000589116 VCX3AQ9NNX9 186 aa11.03□□□□□ -0.64
CCBE1-203ENST00000589116 ZNF226Q9NYT6 803 aa11.03□□□□□ -0.64
CCBE1-203ENST00000589116 UNC119BA6NIH7 251 aa11.02□□□□□ -0.64
CCBE1-203ENST00000589116 OIP5O43482 229 aa11.02□□□□□ -0.64
CCBE1-203ENST00000589116 FAM20BO75063 409 aa11.02□□□□□ -0.64
CCBE1-203ENST00000589116 ICAM2P13598 275 aa11.02□□□□□ -0.64
CCBE1-203ENST00000589116 CEACAM1P13688 526 aa11.02□□□□□ -0.64
CCBE1-203ENST00000589116 PGCP20142 388 aa11.02□□□□□ -0.64
CCBE1-203ENST00000589116 ALDH3B2P48448 385 aa11.02□□□□□ -0.64
CCBE1-203ENST00000589116 P2RX1P51575 399 aa11.02□□□□□ -0.64
CCBE1-203ENST00000589116 SLC35A2P78381 396 aa11.02□□□□□ -0.64
CCBE1-203ENST00000589116 CBFBQ13951 182 aa11.02□□□□□ -0.64
CCBE1-203ENST00000589116 GINS1Q14691 196 aa11.02□□□□□ -0.64
CCBE1-203ENST00000589116 COL28A1Q2UY09 1125 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms