RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 VMP1Q96GC9 406 aa18.71■□□□□ 0.59
ATG4D-204ENST00000586417 LPAR4Q99677 370 aa18.71■□□□□ 0.59
ATG4D-204ENST00000586417 GPR87Q9BY21 358 aa18.71■□□□□ 0.59
ATG4D-204ENST00000586417 RTN4RQ9BZR6 473 aa18.71■□□□□ 0.59
ATG4D-204ENST00000586417 SLC25A19Q9HC21 320 aa18.71■□□□□ 0.59
ATG4D-204ENST00000586417 EXOSC3Q9NQT5 275 aaKnown RBP18.71■□□□□ 0.59
ATG4D-204ENST00000586417 ERVK-18Q9QC07 812 aa18.71■□□□□ 0.59
ATG4D-204ENST00000586417 C19orf25Q9UFG5 118 aaPredicted RBP18.71■□□□□ 0.59
ATG4D-204ENST00000586417 PCSK5Q92824 1860 aa18.71■□□□□ 0.59
ATG4D-204ENST00000586417 MPZL2O60487 215 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 NGFRP08138 427 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 UBL4AP11441 157 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 HPGDP15428 266 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 PNLIPRP2P54317 469 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 SNRPGP62308 76 aaKnown RBP18.7■□□□□ 0.58
ATG4D-204ENST00000586417 PSPHP78330 225 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 PRKCDQ05655 676 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 GINS1Q14691 196 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 NEDD8Q15843 81 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 ACSM5Q6NUN0 579 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 LINC00114Q6XXX2 140 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 PTCHD4Q6ZW05 846 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 ZNF540Q8NDQ6 660 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 NUBPLQ8TB37 319 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 MEPEQ9NQ76 525 aaPredicted RBP18.7■□□□□ 0.58
ATG4D-204ENST00000586417 C20orf141Q9NUB4 165 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 HS3ST3B1Q9Y662 390 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 CEPT1Q9Y6K0 416 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 APC2O95996 2303 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 LOC102723996A0A087X1L8 192 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 TMEM200CA6NKL6 621 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 ADRB1P08588 477 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 LIFP15018 202 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 MAKP20794 623 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 PCMT1P22061 227 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 SLC26A5P58743 744 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 IL10RAQ13651 578 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 ALG10BQ5I7T1 473 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 CBLN3Q6UW01 205 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 ZNF620Q6ZNG0 422 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 MRGPREQ86SM8 312 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 RNF217Q8TC41 542 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 PHOSPHO1Q8TCT1 267 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 IPCEF1Q8WWN9 437 aaPredicted RBP18.7■□□□□ 0.58
ATG4D-204ENST00000586417 MPP4Q96JB8 637 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 HS6ST2Q96MM7 605 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 GPN2Q9H9Y4 310 aaPredicted RBP18.7■□□□□ 0.58
ATG4D-204ENST00000586417 KRCC1Q9NPI7 259 aaPredicted RBP18.7■□□□□ 0.58
ATG4D-204ENST00000586417 FKBP14Q9NWM8 211 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 IL20Q9NYY1 176 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 PSORS1C1Q9UIG5 152 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 PCDHGB1Q9Y5G3 927 aa18.7■□□□□ 0.58
ATG4D-204ENST00000586417 OTX2P32243 289 aa18.69■□□□□ 0.58
ATG4D-204ENST00000586417 RBM34P42696 430 aaKnown RBP18.69■□□□□ 0.58
ATG4D-204ENST00000586417 CTBP2P56545 445 aa18.69■□□□□ 0.58
ATG4D-204ENST00000586417 RAB39AQ14964 217 aa18.69■□□□□ 0.58
ATG4D-204ENST00000586417 ZBED5Q49AG3 693 aa18.69■□□□□ 0.58
ATG4D-204ENST00000586417 ULK3Q6PHR2 472 aa18.69■□□□□ 0.58
ATG4D-204ENST00000586417 C16orf47Q6ZP98 133 aaPredicted RBP18.69■□□□□ 0.58
ATG4D-204ENST00000586417 CADM2Q8N3J6 435 aa18.69■□□□□ 0.58
ATG4D-204ENST00000586417 OR8K3Q8NH51 312 aa18.69■□□□□ 0.58
ATG4D-204ENST00000586417 TEX47Q8TBZ9 253 aa18.69■□□□□ 0.58
ATG4D-204ENST00000586417 TRUB1Q8WWH5 349 aaKnown RBP18.69■□□□□ 0.58
ATG4D-204ENST00000586417 DGCR14Q96DF8 476 aaKnown RBP18.69■□□□□ 0.58
ATG4D-204ENST00000586417 CCNB1IP1Q9NPC3 277 aa18.69■□□□□ 0.58
ATG4D-204ENST00000586417 ATP13A2Q9NQ11 1180 aa18.69■□□□□ 0.58
ATG4D-204ENST00000586417 CARD8Q9Y2G2 431 aa18.69■□□□□ 0.58
ATG4D-204ENST00000586417 MED31Q9Y3C7 131 aa18.69■□□□□ 0.58
ATG4D-204ENST00000586417 TRBV11-1A0A0K0K1C0 115 aa18.68■□□□□ 0.58
ATG4D-204ENST00000586417 A0A1W2PQD3 144 aa18.68■□□□□ 0.58
ATG4D-204ENST00000586417 ALG1L2C9J202 215 aa18.68■□□□□ 0.58
ATG4D-204ENST00000586417 H3BSA7 217 aa18.68■□□□□ 0.58
ATG4D-204ENST00000586417 SOCS6O14544 535 aa18.68■□□□□ 0.58
ATG4D-204ENST00000586417 ZNF264O43296 627 aa18.68■□□□□ 0.58
ATG4D-204ENST00000586417 TLX3O43711 291 aaPredicted RBP18.68■□□□□ 0.58
ATG4D-204ENST00000586417 ZNF354AO60765 605 aaPredicted RBP18.68■□□□□ 0.58
ATG4D-204ENST00000586417 MRPS14O60783 128 aaKnown RBP18.68■□□□□ 0.58
ATG4D-204ENST00000586417 IFI30P13284 250 aa18.68■□□□□ 0.58
ATG4D-204ENST00000586417 NUDT6P53370 316 aa18.68■□□□□ 0.58
ATG4D-204ENST00000586417 EFNB1P98172 346 aa18.68■□□□□ 0.58
ATG4D-204ENST00000586417 CLN3Q13286 438 aa18.68■□□□□ 0.58
ATG4D-204ENST00000586417 TMEM201Q5SNT2 666 aa18.68■□□□□ 0.58
ATG4D-204ENST00000586417 GTF2IRD2BQ6EKJ0 949 aa18.68■□□□□ 0.58
ATG4D-204ENST00000586417 CASP12Q6UXS9 341 aa18.68■□□□□ 0.58
ATG4D-204ENST00000586417 TMPRSS11FQ6ZWK6 438 aa18.68■□□□□ 0.58
ATG4D-204ENST00000586417 PPP1R32Q7Z5V6 425 aa18.68■□□□□ 0.58
ATG4D-204ENST00000586417 GPR141Q7Z602 305 aa18.68■□□□□ 0.58
ATG4D-204ENST00000586417 GTF2IRD2Q86UP8 949 aa18.68■□□□□ 0.58
ATG4D-204ENST00000586417 CLDN22Q8N7P3 220 aa18.68■□□□□ 0.58
ATG4D-204ENST00000586417 FGF11Q92914 225 aa18.68■□□□□ 0.58
ATG4D-204ENST00000586417 IL4I1Q96RQ9 567 aa18.68■□□□□ 0.58
ATG4D-204ENST00000586417 POLDIP3Q9BY77 421 aaKnown RBP18.68■□□□□ 0.58
ATG4D-204ENST00000586417 DPH1Q9BZG8 443 aa18.68■□□□□ 0.58
ATG4D-204ENST00000586417 AMBNQ9NP70 447 aa18.68■□□□□ 0.58
ATG4D-204ENST00000586417 SNX5Q9Y5X3 404 aa18.68■□□□□ 0.58
ATG4D-204ENST00000586417 CHD8Q9HCK8 2581 aa18.68■□□□□ 0.58
ATG4D-204ENST00000586417 SH3D21A4FU49 640 aa18.68■□□□□ 0.58
ATG4D-204ENST00000586417 OR6C70A6NIJ9 312 aa18.68■□□□□ 0.58
ATG4D-204ENST00000586417 KPNA4O00629 521 aaPredicted RBP18.68■□□□□ 0.58
ATG4D-204ENST00000586417 RGS10O43665 173 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms