RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 POLR2HP52434 150 aaKnown RBP13.2□□□□□ -0.3
SCAMP4-209ENST00000585335 CRYBA2P53672 197 aa13.2□□□□□ -0.3
SCAMP4-209ENST00000585335 GFRA1P56159 465 aa13.2□□□□□ -0.3
SCAMP4-209ENST00000585335 HSF1Q00613 529 aa13.2□□□□□ -0.3
SCAMP4-209ENST00000585335 PLAURQ03405 335 aa13.2□□□□□ -0.3
SCAMP4-209ENST00000585335 MERTKQ12866 999 aa13.2□□□□□ -0.3
SCAMP4-209ENST00000585335 SF3B4Q15427 424 aaKnown RBP eCLIP13.2□□□□□ -0.3
SCAMP4-209ENST00000585335 TOMM34Q15785 309 aaPredicted RBP13.2□□□□□ -0.3
SCAMP4-209ENST00000585335 NRF1Q16656 503 aa13.2□□□□□ -0.3
SCAMP4-209ENST00000585335 TMEM44Q2T9K0 475 aa13.2□□□□□ -0.3
SCAMP4-209ENST00000585335 IFI44LQ53G44 452 aa13.2□□□□□ -0.3
SCAMP4-209ENST00000585335 SLC25A53Q5H9E4 307 aa13.2□□□□□ -0.3
SCAMP4-209ENST00000585335 VASNQ6EMK4 673 aa13.2□□□□□ -0.3
SCAMP4-209ENST00000585335 C3orf33Q6P1S2 294 aa13.2□□□□□ -0.3
SCAMP4-209ENST00000585335 CARM1Q86X55 608 aa13.2□□□□□ -0.3
SCAMP4-209ENST00000585335 ULK2Q8IYT8 1036 aa13.2□□□□□ -0.3
SCAMP4-209ENST00000585335 MEIOBQ8N635 442 aa13.2□□□□□ -0.3
SCAMP4-209ENST00000585335 VANGL1Q8TAA9 524 aaPredicted RBP13.2□□□□□ -0.3
SCAMP4-209ENST00000585335 CLPTM1LQ96KA5 538 aa13.2□□□□□ -0.3
SCAMP4-209ENST00000585335 UGT2B28Q9BY64 529 aa13.2□□□□□ -0.3
SCAMP4-209ENST00000585335 PCDHAC1Q9H158 963 aa13.2□□□□□ -0.3
SCAMP4-209ENST00000585335 DCAF13Q9NV06 445 aaKnown RBP13.2□□□□□ -0.3
SCAMP4-209ENST00000585335 NPIPA2E9PIF3 369 aa13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 NPIPA3F8WFD2 350 aa13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 ETV2O00321 342 aaPredicted RBP13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 GSC2O15499 205 aa13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 SLC19A2O60779 497 aa13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 IFNW1P05000 195 aa13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 TPOP07202 933 aa13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 PRG2P13727 222 aa13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 BMP7P18075 431 aa13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 FKBP2P26885 142 aaKnown RBP13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 ACAA2P42765 397 aaKnown RBP13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 MAP2K6P52564 334 aa13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 B3GALT5-AS1P59052 145 aa13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 FOXK1P85037 733 aa13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 KCNC4Q03721 635 aa13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 CRYZQ08257 329 aaKnown RBP13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 TRAP1Q12931 704 aaKnown RBP13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 SELENBP1Q13228 472 aa13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 BCL2A1Q16548 175 aa13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 PDSS1Q5T2R2 415 aa13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 PLEKHM3Q6ZWE6 761 aa13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 CHMP1BQ7LBR1 199 aa13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 LSMEM1Q8N8F7 131 aa13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 OR5M1Q8NGP8 315 aa13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 FAM57AQ8TBR7 257 aa13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 SLC25A43Q8WUT9 341 aaPredicted RBP13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 DNAJA4Q8WW22 397 aaPredicted RBP13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 SMPDL3BQ92485 455 aa13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 HSH2DQ96JZ2 352 aa13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 MCHR1Q99705 422 aa13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 CADM1Q9BY67 442 aaKnown RBP13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 POLR2J2Q9GZM3 115 aaKnown RBP13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 POLR2J3Q9H1A7 115 aaKnown RBP13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 SPRR3Q9UBC9 169 aa13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 CAMK2AQ9UQM7 478 aa13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 NCKAP5O14513 1909 aa13.19□□□□□ -0.3
SCAMP4-209ENST00000585335 FIGNL2A6NMB9 653 aa13.18□□□□□ -0.3
SCAMP4-209ENST00000585335 SHISA8B8ZZ34 492 aa13.18□□□□□ -0.3
SCAMP4-209ENST00000585335 H0Y3Z8 333 aa13.18□□□□□ -0.3
SCAMP4-209ENST00000585335 ADAM11O75078 769 aa13.18□□□□□ -0.3
SCAMP4-209ENST00000585335 NTN1O95631 604 aa13.18□□□□□ -0.3
SCAMP4-209ENST00000585335 EPPINO95925 133 aa13.18□□□□□ -0.3
SCAMP4-209ENST00000585335 CXCR1P25024 350 aa13.18□□□□□ -0.3
SCAMP4-209ENST00000585335 ZNF136P52737 540 aa13.18□□□□□ -0.3
SCAMP4-209ENST00000585335 DLX5P56178 289 aa13.18□□□□□ -0.3
SCAMP4-209ENST00000585335 RAC1P63000 192 aa13.18□□□□□ -0.3
SCAMP4-209ENST00000585335 HOXC5Q00444 222 aa13.18□□□□□ -0.3
SCAMP4-209ENST00000585335 LCN8Q6JVE9 175 aa13.18□□□□□ -0.3
SCAMP4-209ENST00000585335 POMZP3Q6PJE2 187 aa13.18□□□□□ -0.3
SCAMP4-209ENST00000585335 CYP2R1Q6VVX0 501 aa13.18□□□□□ -0.3
SCAMP4-209ENST00000585335 DEF8Q6ZN54 512 aa13.18□□□□□ -0.3
SCAMP4-209ENST00000585335 YTHDF3Q7Z739 585 aaKnown RBP13.18□□□□□ -0.3
SCAMP4-209ENST00000585335 COMTD1Q86VU5 262 aa13.18□□□□□ -0.3
SCAMP4-209ENST00000585335 CYP4Z1Q86W10 505 aa13.18□□□□□ -0.3
SCAMP4-209ENST00000585335 OR6T1Q8NGN1 323 aa13.18□□□□□ -0.3
SCAMP4-209ENST00000585335 RNF217Q8TC41 542 aa13.18□□□□□ -0.3
SCAMP4-209ENST00000585335 POC1BQ8TC44 478 aa13.18□□□□□ -0.3
SCAMP4-209ENST00000585335 TIMP4Q99727 224 aa13.18□□□□□ -0.3
SCAMP4-209ENST00000585335 KLHDC3Q9BQ90 382 aa13.18□□□□□ -0.3
SCAMP4-209ENST00000585335 CHRNA9Q9UGM1 479 aa13.18□□□□□ -0.3
SCAMP4-209ENST00000585335 ZNF337Q9Y3M9 751 aa13.18□□□□□ -0.3
SCAMP4-209ENST00000585335 TMED7-TICAM2A0A0A6YYA0 188 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 ELOA3DA6NLF2 546 aaPredicted RBP13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 WDR1O75083 606 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 CIB2O75838 187 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 HOXD4P09016 255 aaPredicted RBP13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 PNMTP11086 282 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 GABRA1P14867 456 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 CPN1P15169 458 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 TACR3P29371 465 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 SLC7A1P30825 629 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 PTGER4P35408 488 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 LHX2P50458 406 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 RPS3AP61247 264 aaKnown RBP13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 FLOT2Q14254 428 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 OR1Q1Q15612 314 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 IGFBP7Q16270 282 aa13.17□□□□□ -0.3
SCAMP4-209ENST00000585335 ELOA3BQ3SY89 546 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms