RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 OR5B2Q96R09 309 aa7.94□□□□□ -1.14
GGA3-212ENST00000582376 LMF2Q9BU23 707 aaKnown RBP7.94□□□□□ -1.14
GGA3-212ENST00000582376 TRIM5Q9C035 493 aa7.94□□□□□ -1.14
GGA3-212ENST00000582376 RASSF4Q9H2L5 321 aa7.94□□□□□ -1.14
GGA3-212ENST00000582376 IPPKQ9H8X2 491 aa7.94□□□□□ -1.14
GGA3-212ENST00000582376 ZNF275Q9NSD4 429 aaPredicted RBP7.94□□□□□ -1.14
GGA3-212ENST00000582376 UPB1Q9UBR1 384 aa7.94□□□□□ -1.14
GGA3-212ENST00000582376 OPN4Q9UHM6 478 aa7.94□□□□□ -1.14
GGA3-212ENST00000582376 C19orf53Q9UNZ5 99 aaPredicted RBP7.94□□□□□ -1.14
GGA3-212ENST00000582376 SLC12A4Q9UP95 1085 aa7.94□□□□□ -1.14
GGA3-212ENST00000582376 CHMP2BQ9UQN3 213 aa7.94□□□□□ -1.14
GGA3-212ENST00000582376 MTO1Q9Y2Z2 717 aaKnown RBP7.94□□□□□ -1.14
GGA3-212ENST00000582376 GPC6Q9Y625 555 aaPredicted RBP7.94□□□□□ -1.14
GGA3-212ENST00000582376 WNK2Q9Y3S1 2297 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 TTC36A6NLP5 189 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 G3V4G9 280 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 GPR171O14626 319 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 PIP5K1BO14986 540 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 SHOX2O60902 331 aaPredicted RBP7.93□□□□□ -1.14
GGA3-212ENST00000582376 NUDT14O95848 222 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 TSPAN15O95858 294 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 STMN1P16949 149 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 THBS4P35443 961 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 ELK3P41970 407 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 POU3F1Q03052 451 aaPredicted RBP7.93□□□□□ -1.14
GGA3-212ENST00000582376 ILF2Q12905 390 aaKnown RBP7.93□□□□□ -1.14
GGA3-212ENST00000582376 IFT88Q13099 833 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 FRG1Q14331 258 aaKnown RBP7.93□□□□□ -1.14
GGA3-212ENST00000582376 TRADDQ15628 312 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 CD226Q15762 336 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 FAM189A2Q15884 450 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 TAF9Q16594 264 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 ZNF362Q5T0B9 420 aaPredicted RBP7.93□□□□□ -1.14
GGA3-212ENST00000582376 STEAP4Q687X5 459 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 OLFML2AQ68BL7 652 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 REP15Q6BDI9 236 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 C16orf87Q6PH81 154 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 TMEM107Q6UX40 140 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 GOLGA7Q7Z5G4 137 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 TREML1Q86YW5 311 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 RELL1Q8IUW5 271 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 ZNF527Q8NB42 609 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 OR4F5Q8NH21 305 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 FAM110DQ8TAY7 271 aaPredicted RBP7.93□□□□□ -1.14
GGA3-212ENST00000582376 PIK3R3Q92569 461 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 UBXN10Q96LJ8 280 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 ZNF48Q96MX3 618 aaPredicted RBP7.93□□□□□ -1.14
GGA3-212ENST00000582376 CDK15Q96Q40 435 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 BBS4Q96RK4 519 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 ATOH8Q96SQ7 321 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 OBP2BQ9NPH6 170 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 SLC35C2Q9NQQ7 365 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 DDX18Q9NVP1 670 aaKnown RBP7.93□□□□□ -1.14
GGA3-212ENST00000582376 NSMCE4AQ9NXX6 385 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 ZNF69Q9UC07 566 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 NUP50Q9UKX7 468 aa7.93□□□□□ -1.14
GGA3-212ENST00000582376 ZNF716A6NP11 495 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 UPK1AO00322 258 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 SCDO00767 359 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 SLITRK5O94991 958 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 PSMG1O95456 288 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 HPXP02790 462 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 IL3P08700 152 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 CECR9P0C854 216 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 PAX7P23759 505 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 MPGP29372 298 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 CALCRP30988 508 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 NTF4P34130 210 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 NCBP2P52298 156 aaKnown RBP eCLIP7.92□□□□□ -1.144e-7■■■■■ 29.5
GGA3-212ENST00000582376 CSNK2A1P68400 391 aaPredicted RBP7.92□□□□□ -1.14
GGA3-212ENST00000582376 ZNF117Q03924 483 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 PFKFB4Q16877 469 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 HIKESHIQ53FT3 197 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 SGO1Q5FBB7 561 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 ARMCX4Q5H9R4 360 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 KPRPQ5T749 579 aaPredicted RBP7.92□□□□□ -1.14
GGA3-212ENST00000582376 ANKRD16Q6P6B7 361 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 CASP12Q6UXS9 341 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 SYT10Q6XYQ8 523 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 ISCA2Q86U28 154 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 MTDHQ86UE4 582 aaKnown RBP7.92□□□□□ -1.14
GGA3-212ENST00000582376 BCL6BQ8N143 479 aaPredicted RBP7.92□□□□□ -1.14
GGA3-212ENST00000582376 OR2L13Q8N349 312 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 MMGT1Q8N4V1 131 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 C1orf52Q8N6N3 182 aaKnown RBP7.92□□□□□ -1.14
GGA3-212ENST00000582376 SLC16A11Q8NCK7 471 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 GPR151Q8TDV0 419 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 YIPF5Q969M3 257 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 ATP6V1E2Q96A05 226 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 MAGOHBQ96A72 148 aaKnown RBP7.92□□□□□ -1.14
GGA3-212ENST00000582376 ARL8AQ96BM9 186 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 ZNF416Q9BWM5 594 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 NMRAL1Q9HBL8 299 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 OXSMQ9NWU1 459 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 PLEK2Q9NYT0 353 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 ACTL7BQ9Y614 415 aa7.92□□□□□ -1.14
GGA3-212ENST00000582376 A0A1W2PQD3 144 aa7.91□□□□□ -1.14
GGA3-212ENST00000582376 SYCE1LA8MT33 242 aa7.91□□□□□ -1.14
GGA3-212ENST00000582376 SULT2B1O00204 365 aa7.91□□□□□ -1.14
GGA3-212ENST00000582376 DEAF1O75398 565 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms