RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	KLHL9	Q9P2J3	617 aa		10.31	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	KCNE5	Q9UJ90	142 aa		10.31	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	MKLN1	Q9UL63	735 aa		10.31	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	LIPT1	Q9Y234	373 aa		10.31	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	RNF103-CHMP3	A0A140T963	221 aa		10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	WDR91	A4D1P6	747 aa		10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	SERINC4	A6NH21	518 aa		10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	SMAD9	O15198	467 aa	Known RBP	10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	EIF4E2	O60573	245 aa	Known RBP	10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	RAMP1	O60894	148 aa		10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	NDUFS7	O75251	213 aa		10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	BCAS1	O75363	584 aa	Predicted RBP	10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	CSTA	P01040	98 aa		10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	IGHV3-9	P01782	118 aa		10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	FES	P07332	822 aa		10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	DANCR	P0C864	163 aa		10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	SESN3	P58005	492 aa		10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	RAC3	P60763	192 aa		10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	KRTAP1-1	Q07627	177 aa		10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	SKP2	Q13309	424 aa		10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	PGGHG	Q32M88	737 aa		10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	C3orf33	Q6P1S2	294 aa		10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	SEZ6L2	Q6UXD5	910 aa		10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114		Q6ZT83	130 aa		10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	C16orf62	Q7Z3J2	963 aa		10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	C6orf120	Q7Z4R8	191 aa		10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	ANKRD46	Q86W74	232 aa		10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	RIMKLA	Q8IXN7	391 aa		10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	SLC43A2	Q8N370	569 aa		10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	OR4A15	Q8NGL6	344 aa		10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	MOAP1	Q96BY2	351 aa		10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	ZBTB9	Q96C00	473 aa		10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	TRMT61A	Q96FX7	289 aa	Known RBP	10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	POTEKP	Q9BYX7	375 aa		10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	OR51I1	Q9H343	314 aa		10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	BCO1	Q9HAY6	547 aa		10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	NGB	Q9NPG2	151 aa		10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	GDF2	Q9UK05	429 aa	Predicted RBP	10.3	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	OVOL3	O00110	214 aa		10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	ITM2A	O43736	263 aa		10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	CYTIP	O60759	359 aa		10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	ADAM11	O75078	769 aa		10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	STX11	O75558	287 aa		10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	UGT2B17	O75795	530 aa		10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	SOX30	O94993	753 aa		10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	IGHV4-39	P01824	125 aa		10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	BPGM	P07738	259 aa		10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	OR12D1	P0DN82	309 aa		10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	TFPI	P10646	304 aa		10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	IGHV1-2	P23083	117 aa		10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	RYK	P34925	604 aa		10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	OR3A2	P47893	321 aa		10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	DIO1	P49895	249 aa		10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	C21orf58	P58505	322 aa		10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	VSNL1	P62760	191 aa		10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	P2RY6	Q15077	328 aa		10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	PPA1	Q15181	289 aa		10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	MAPK14	Q16539	360 aa		10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	SLC25A53	Q5H9E4	307 aa		10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	BHLHB9	Q6PI77	547 aa		10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	ZNF100	Q8IYN0	542 aa		10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	UBE2J2	Q8N2K1	259 aa		10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	RIBC1	Q8N443	379 aa	Predicted RBP	10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	NATD1	Q8N6N6	113 aa		10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	PIWIL2	Q8TC59	973 aa	Known RBP	10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	ZNF75CP	Q92670	426 aa	Predicted RBP	10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	RAB8B	Q92930	207 aa		10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	TRIM2	Q9C040	744 aa		10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	NMUR2	Q9GZQ4	415 aa		10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	LAT2	Q9GZY6	243 aa		10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	GP6	Q9HCN6	339 aa		10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	NPAP1	Q9NZP6	1156 aa		10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	LGALS13	Q9UHV8	139 aa		10.29	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	ANK3	Q12955	4377 aa	Known RBP	10.28	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114		A0A1W2PR80	420 aa		10.28	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	SULT2B1	O00204	365 aa		10.28	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	ABCD4	O14678	606 aa		10.28	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	TMCC2	O75069	709 aa		10.28	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	RAD51D	O75771	328 aa		10.28	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	CPSF4	O95639	269 aa	Known RBP	10.28	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	NUDT17	P0C025	328 aa		10.28	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	CCNA2	P20248	432 aa		10.28	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	IDUA	P35475	653 aa		10.28	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	SERPINB5	P36952	375 aa		10.28	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	CDH11	P55287	796 aa		10.28	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	CLDN8	P56748	225 aa		10.28	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	EMX2	Q04743	252 aa		10.28	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	DMTN	Q08495	405 aa		10.28	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	ZNF141	Q15928	474 aa		10.28	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	ARHGAP11B	Q3KRB8	267 aa		10.28	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	ZNF781	Q8N8C0	355 aa		10.28	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	ZNF563	Q8TA94	476 aa		10.28	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	XAGE5	Q8WWM1	108 aa		10.28	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	ARL8A	Q96BM9	186 aa		10.28	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	MUCL1	Q96DR8	90 aa		10.28	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	REG4	Q9BYZ8	158 aa		10.28	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	ZNF350	Q9GZX5	532 aa		10.28	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	SLCO5A1	Q9H2Y9	848 aa		10.28	□□□□□ -0.76
CDK5RAP3-223	ENST00000582114	ALG2	Q9H553	416 aa		10.28	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms