RNA–Protein interactions for RNA: ENST00000582104.5

SNX11-210, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-210ENST00000582104 ZNF136P52737 540 aa12.05□□□□□ -0.48
SNX11-210ENST00000582104 ZNF117Q03924 483 aa12.05□□□□□ -0.48
SNX11-210ENST00000582104 LTBQ06643 244 aa12.05□□□□□ -0.48
SNX11-210ENST00000582104 SKP2Q13309 424 aa12.05□□□□□ -0.48
SNX11-210ENST00000582104 OR5M10Q6IEU7 315 aa12.05□□□□□ -0.48
SNX11-210ENST00000582104 TMEM81Q6P7N7 255 aa12.05□□□□□ -0.48
SNX11-210ENST00000582104 CARM1Q86X55 608 aa12.05□□□□□ -0.48
SNX11-210ENST00000582104 ZNF527Q8NB42 609 aa12.05□□□□□ -0.48
SNX11-210ENST00000582104 GOLM1Q8NBJ4 401 aa12.05□□□□□ -0.48
SNX11-210ENST00000582104 PSD4Q8NDX1 1056 aa12.05□□□□□ -0.48
SNX11-210ENST00000582104 DUSP19Q8WTR2 217 aa12.05□□□□□ -0.48
SNX11-210ENST00000582104 HAS2Q92819 552 aa12.05□□□□□ -0.48
SNX11-210ENST00000582104 C7orf34Q96L11 122 aa12.05□□□□□ -0.48
SNX11-210ENST00000582104 TAAR6Q96RI8 345 aa12.05□□□□□ -0.48
SNX11-210ENST00000582104 SECISBP2Q96T21 854 aaKnown RBP12.05□□□□□ -0.48
SNX11-210ENST00000582104 OSBPL11Q9BXB4 747 aa12.05□□□□□ -0.48
SNX11-210ENST00000582104 ANGPTL4Q9BY76 406 aa12.05□□□□□ -0.48
SNX11-210ENST00000582104 TBL1XR1Q9BZK7 514 aa12.05□□□□□ -0.48
SNX11-210ENST00000582104 DLL4Q9NR61 685 aa12.05□□□□□ -0.48
SNX11-210ENST00000582104 KLRF1Q9NZS2 232 aa12.05□□□□□ -0.48
SNX11-210ENST00000582104 SAMD4AQ9UPU9 718 aaKnown RBP12.05□□□□□ -0.48
SNX11-210ENST00000582104 CARD8Q9Y2G2 431 aa12.05□□□□□ -0.48
SNX11-210ENST00000582104 SH3GLB1Q9Y371 365 aa12.05□□□□□ -0.48
SNX11-210ENST00000582104 RRP15Q9Y3B9 282 aaKnown RBP12.05□□□□□ -0.48
SNX11-210ENST00000582104 FREM3P0C091 2139 aa12.05□□□□□ -0.48
SNX11-210ENST00000582104 NCKAP5O14513 1909 aa12.05□□□□□ -0.48
SNX11-210ENST00000582104 FN1P02751 2386 aaKnown RBP12.05□□□□□ -0.48
SNX11-210ENST00000582104 AKAP6Q13023 2319 aa12.04□□□□□ -0.48
SNX11-210ENST00000582104 MED12Q93074 2177 aa12.04□□□□□ -0.48
SNX11-210ENST00000582104 H3BNX3 289 aa12.04□□□□□ -0.48
SNX11-210ENST00000582104 NDUFB5O43674 189 aa12.04□□□□□ -0.48
SNX11-210ENST00000582104 GMFGO60234 142 aa12.04□□□□□ -0.48
SNX11-210ENST00000582104 SLC25A12O75746 678 aa12.04□□□□□ -0.48
SNX11-210ENST00000582104 CSTAP01040 98 aa12.04□□□□□ -0.48
SNX11-210ENST00000582104 UBL4AP11441 157 aa12.04□□□□□ -0.48
SNX11-210ENST00000582104 ACAA2P42765 397 aaKnown RBP12.04□□□□□ -0.48
SNX11-210ENST00000582104 IST1P53990 364 aa12.04□□□□□ -0.48
SNX11-210ENST00000582104 GPR85P60893 370 aa12.04□□□□□ -0.48
SNX11-210ENST00000582104 ARG2P78540 354 aa12.04□□□□□ -0.48
SNX11-210ENST00000582104 VLDLRP98155 873 aa12.04□□□□□ -0.48
SNX11-210ENST00000582104 FOXD4Q12950 439 aaPredicted RBP12.04□□□□□ -0.48
SNX11-210ENST00000582104 IFI44LQ53G44 452 aa12.04□□□□□ -0.48
SNX11-210ENST00000582104 FKBP9P1Q75LS8 142 aa12.04□□□□□ -0.48
SNX11-210ENST00000582104 GRAMD2AQ8IUY3 354 aa12.04□□□□□ -0.48
SNX11-210ENST00000582104 CMIPQ8IY22 773 aa12.04□□□□□ -0.48
SNX11-210ENST00000582104 WDSUB1Q8N9V3 476 aa12.04□□□□□ -0.48
SNX11-210ENST00000582104 OR6T1Q8NGN1 323 aa12.04□□□□□ -0.48
SNX11-210ENST00000582104 OIT3Q8WWZ8 545 aa12.04□□□□□ -0.48
SNX11-210ENST00000582104 PYDC1Q8WXC3 89 aa12.04□□□□□ -0.48
SNX11-210ENST00000582104 PROX1Q92786 737 aa12.04□□□□□ -0.48
SNX11-210ENST00000582104 SLC47A1Q96FL8 570 aa12.04□□□□□ -0.48
SNX11-210ENST00000582104 DUS3LQ96G46 650 aaKnown RBP12.04□□□□□ -0.48
SNX11-210ENST00000582104 SH3YL1Q96HL8 342 aaPredicted RBP12.04□□□□□ -0.48
SNX11-210ENST00000582104 RSRC1Q96IZ7 334 aaKnown RBP12.04□□□□□ -0.48
SNX11-210ENST00000582104 FRMD6Q96NE9 622 aa12.04□□□□□ -0.48
SNX11-210ENST00000582104 AMBRA1Q9C0C7 1298 aa12.04□□□□□ -0.48
SNX11-210ENST00000582104 KLHL1Q9NR64 748 aa12.04□□□□□ -0.48
SNX11-210ENST00000582104 SACM1LQ9NTJ5 587 aa12.04□□□□□ -0.48
SNX11-210ENST00000582104 CCM2LQ9NUG4 571 aaPredicted RBP12.04□□□□□ -0.48
SNX11-210ENST00000582104 CNIH4Q9P003 139 aa12.04□□□□□ -0.48
SNX11-210ENST00000582104 BAG5Q9UL15 447 aa12.04□□□□□ -0.48
SNX11-210ENST00000582104 AURKCQ9UQB9 309 aa12.04□□□□□ -0.48
SNX11-210ENST00000582104 RPH3AQ9Y2J0 694 aaPredicted RBP12.04□□□□□ -0.48
SNX11-210ENST00000582104 WIF1Q9Y5W5 379 aa12.04□□□□□ -0.48
SNX11-210ENST00000582104 ANKRD33BA6NCL7 494 aa12.03□□□□□ -0.48
SNX11-210ENST00000582104 LRRC3CA6NJW4 275 aa12.03□□□□□ -0.48
SNX11-210ENST00000582104 J3KTA2 159 aa12.03□□□□□ -0.48
SNX11-210ENST00000582104 hCG_2039718K7EN88 272 aa12.03□□□□□ -0.48
SNX11-210ENST00000582104 GTPBP1O00178 669 aaKnown RBP12.03□□□□□ -0.48
SNX11-210ENST00000582104 GNB5O14775 395 aa12.03□□□□□ -0.48
SNX11-210ENST00000582104 ZNF264O43296 627 aa12.03□□□□□ -0.48
SNX11-210ENST00000582104 TRIM3O75382 744 aaPredicted RBP12.03□□□□□ -0.48
SNX11-210ENST00000582104 CYP7B1O75881 506 aa12.03□□□□□ -0.48
SNX11-210ENST00000582104 KRT36O76013 467 aa12.03□□□□□ -0.48
SNX11-210ENST00000582104 DIRAS1O95057 198 aa12.03□□□□□ -0.48
SNX11-210ENST00000582104 P04436 131 aa12.03□□□□□ -0.48
SNX11-210ENST00000582104 GPIP06744 558 aa12.03□□□□□ -0.48
SNX11-210ENST00000582104 SP1P08047 785 aa12.03□□□□□ -0.48
SNX11-210ENST00000582104 HTR2AP28223 471 aa12.03□□□□□ -0.48
SNX11-210ENST00000582104 DNAJA1P31689 397 aaKnown RBP12.03□□□□□ -0.48
SNX11-210ENST00000582104 YAP1P46937 504 aaKnown RBP12.03□□□□□ -0.48
SNX11-210ENST00000582104 TNFSF10P50591 281 aa12.03□□□□□ -0.48
SNX11-210ENST00000582104 SMSP52788 366 aa12.03□□□□□ -0.48
SNX11-210ENST00000582104 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.03□□□□□ -0.48
SNX11-210ENST00000582104 EIPR1Q53HC9 387 aa12.03□□□□□ -0.48
SNX11-210ENST00000582104 SLC25A25Q6KCM7 469 aa12.03□□□□□ -0.48
SNX11-210ENST00000582104 SLC30A6Q6NXT4 461 aa12.03□□□□□ -0.48
SNX11-210ENST00000582104 MEX3BQ6ZN04 569 aaKnown RBP12.03□□□□□ -0.48
SNX11-210ENST00000582104 PAPD5Q8NDF8 572 aaKnown RBP12.03□□□□□ -0.48
SNX11-210ENST00000582104 RASSF5Q8WWW0 418 aa12.03□□□□□ -0.48
SNX11-210ENST00000582104 GEMIN6Q8WXD5 167 aaKnown RBP12.03□□□□□ -0.48
SNX11-210ENST00000582104 LZICQ8WZA0 190 aa12.03□□□□□ -0.48
SNX11-210ENST00000582104 SCMH1Q96GD3 660 aa12.03□□□□□ -0.48
SNX11-210ENST00000582104 FOXC2Q99958 501 aa12.03□□□□□ -0.48
SNX11-210ENST00000582104 LAT2Q9GZY6 243 aa12.03□□□□□ -0.48
SNX11-210ENST00000582104 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.03□□□□□ -0.48
SNX11-210ENST00000582104 CACYBPQ9HB71 228 aaKnown RBP12.03□□□□□ -0.48
SNX11-210ENST00000582104 TIMMDC1Q9NPL8 285 aa12.03□□□□□ -0.48
SNX11-210ENST00000582104 TUBA8Q9NY65 449 aaPredicted RBP12.03□□□□□ -0.48
SNX11-210ENST00000582104 MED11Q9P086 117 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms