RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 FAM83FQ8NEG4 500 aaPredicted RBP12.96□□□□□ -0.33
SKA2-205ENST00000580541 OR10Q1Q8NGQ4 319 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 FAR1Q8WVX9 515 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 STMN2Q93045 179 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 MPP4Q96JB8 637 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 FNDC11Q9BVV2 318 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 AMBRA1Q9C0C7 1298 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 CCM2LQ9NUG4 571 aaPredicted RBP12.96□□□□□ -0.33
SKA2-205ENST00000580541 ENPP4Q9Y6X5 453 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 V9GYQ6 96 aa12.96□□□□□ -0.33
SKA2-205ENST00000580541 FREM3P0C091 2139 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 TRGV5A0A0B4J1U4 118 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 ELOA3DA6NLF2 546 aaPredicted RBP12.95□□□□□ -0.34
SKA2-205ENST00000580541 NPIPA5E9PKD4 350 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 ETV2O00321 342 aaPredicted RBP12.95□□□□□ -0.34
SKA2-205ENST00000580541 HNRNPRO43390 633 aaKnown RBP12.95□□□□□ -0.34
SKA2-205ENST00000580541 BCAS1O75363 584 aaPredicted RBP12.95□□□□□ -0.34
SKA2-205ENST00000580541 KRT36O76013 467 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 OR5F1O95221 314 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 ACTL6AO96019 429 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 FCGR1AP12314 374 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 PRG2P13727 222 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 ELK4P28324 431 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 SLC7A1P30825 629 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 CLK1P49759 484 aaKnown RBP12.95□□□□□ -0.34
SKA2-205ENST00000580541 DLX5P56178 289 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 MERTKQ12866 999 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 NFATC3Q12968 1075 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 KPNB1Q14974 876 aaKnown RBP12.95□□□□□ -0.34
SKA2-205ENST00000580541 ELOA3BQ3SY89 546 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 ALG10BQ5I7T1 473 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 C5orf46Q6UWT4 87 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 RRM2BQ7LG56 351 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 Q8NA96 180 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 ELOA3Q8NG57 546 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 RNF217Q8TC41 542 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 ADAMTS16Q8TE57 1224 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 SLC25A43Q8WUT9 341 aaPredicted RBP12.95□□□□□ -0.34
SKA2-205ENST00000580541 CANT1Q8WVQ1 401 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 DUS3LQ96G46 650 aaKnown RBP12.95□□□□□ -0.34
SKA2-205ENST00000580541 C7orf34Q96L11 122 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 PRRC1Q96M27 445 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 HS6ST2Q96MM7 605 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 SFXN2Q96NB2 322 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 ZNF300Q96RE9 604 aaPredicted RBP12.95□□□□□ -0.34
SKA2-205ENST00000580541 TAAR6Q96RI8 345 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 CHID1Q9BWS9 393 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 RSPO3Q9BXY4 272 aaPredicted RBP12.95□□□□□ -0.34
SKA2-205ENST00000580541 ADAM19Q9H013 955 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 DEFB127Q9H1M4 99 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 NDUFAF4Q9P032 175 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 RIMS3Q9UJD0 308 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 NPIPA1Q9UND3 350 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 AP4S1Q9Y587 144 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 AP4B1Q9Y6B7 739 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 SPTA1P02549 2419 aa12.95□□□□□ -0.34
SKA2-205ENST00000580541 USP24Q9UPU5 2620 aa12.94□□□□□ -0.34
SKA2-205ENST00000580541 HTR3EA5X5Y0 456 aa12.94□□□□□ -0.34
SKA2-205ENST00000580541 CPSF4LA6NMK7 179 aaKnown RBP12.94□□□□□ -0.34
SKA2-205ENST00000580541 EIF4E1BA6NMX2 242 aaKnown RBP12.94□□□□□ -0.34
SKA2-205ENST00000580541 H0YHG0 523 aa12.94□□□□□ -0.34
SKA2-205ENST00000580541 GNGT2O14610 69 aa12.94□□□□□ -0.34
SKA2-205ENST00000580541 ADAMDEC1O15204 470 aa12.94□□□□□ -0.34
SKA2-205ENST00000580541 FKBP6O75344 327 aa12.94□□□□□ -0.34
SKA2-205ENST00000580541 IGHG3P01860 377 aa12.94□□□□□ -0.34
SKA2-205ENST00000580541 PEPDP12955 493 aa12.94□□□□□ -0.34
SKA2-205ENST00000580541 TNFRSF1BP20333 461 aa12.94□□□□□ -0.34
SKA2-205ENST00000580541 TACR3P29371 465 aa12.94□□□□□ -0.34
SKA2-205ENST00000580541 HOXC5Q00444 222 aa12.94□□□□□ -0.34
SKA2-205ENST00000580541 PMP22Q01453 160 aa12.94□□□□□ -0.34
SKA2-205ENST00000580541 GK3PQ14409 553 aa12.94□□□□□ -0.34
SKA2-205ENST00000580541 SF3B4Q15427 424 aaKnown RBP eCLIP12.94□□□□□ -0.34
SKA2-205ENST00000580541 ARHGAP11AQ6P4F7 1023 aa12.94□□□□□ -0.34
SKA2-205ENST00000580541 PCSK4Q6UW60 755 aa12.94□□□□□ -0.34
SKA2-205ENST00000580541 YRDCQ86U90 279 aaKnown RBP12.94□□□□□ -0.34
SKA2-205ENST00000580541 ADGRG5Q8IZF4 528 aa12.94□□□□□ -0.34
SKA2-205ENST00000580541 GHDCQ8N2G8 530 aa12.94□□□□□ -0.34
SKA2-205ENST00000580541 PAPD5Q8NDF8 572 aaKnown RBP12.94□□□□□ -0.34
SKA2-205ENST00000580541 PIK3C3Q8NEB9 887 aa12.94□□□□□ -0.34
SKA2-205ENST00000580541 NEIL3Q8TAT5 605 aa12.94□□□□□ -0.34
SKA2-205ENST00000580541 SLC39A7Q92504 469 aa12.94□□□□□ -0.34
SKA2-205ENST00000580541 SLC38A4Q969I6 547 aa12.94□□□□□ -0.34
SKA2-205ENST00000580541 SARAFQ96BY9 339 aa12.94□□□□□ -0.34
SKA2-205ENST00000580541 DDIT4LQ96D03 193 aa12.94□□□□□ -0.34
SKA2-205ENST00000580541 PIP5K1AQ99755 562 aa12.94□□□□□ -0.34
SKA2-205ENST00000580541 ANKRD19PQ9H560 264 aa12.94□□□□□ -0.34
SKA2-205ENST00000580541 DENND2DQ9H6A0 471 aaPredicted RBP12.94□□□□□ -0.34
SKA2-205ENST00000580541 ARMC1Q9NVT9 282 aa12.94□□□□□ -0.34
SKA2-205ENST00000580541 LUZP4Q9P127 313 aa12.94□□□□□ -0.34
SKA2-205ENST00000580541 RPH3AQ9Y2J0 694 aaPredicted RBP12.94□□□□□ -0.34
SKA2-205ENST00000580541 A0A0B4J2E0 115 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 A0A1B0GVC2 190 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 A0A1B0GWA3 101 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 A0A1B0GX12 115 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 OR14I1A6ND48 311 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 C17orf51A8MQB3 221 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 hCG_2039718K7EN88 272 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 ZZEF1O43149 2961 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 ZNF208O43345 1280 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 CHP2O43745 196 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms