RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 SPG11Q96JI7 2443 aa18.02■□□□□ 0.47
SMG8-204ENST00000580498 PDZD2O15018 2839 aa18.02■□□□□ 0.47
SMG8-204ENST00000580498 HMGN4O00479 90 aa18.01■□□□□ 0.47
SMG8-204ENST00000580498 OIP5O43482 229 aa18.01■□□□□ 0.47
SMG8-204ENST00000580498 CGAP01215 116 aa18.01■□□□□ 0.47
SMG8-204ENST00000580498 IL7RP16871 459 aa18.01■□□□□ 0.47
SMG8-204ENST00000580498 APOBEC1P41238 236 aaKnown RBP18.01■□□□□ 0.47
SMG8-204ENST00000580498 HTR3AP46098 478 aa18.01■□□□□ 0.47
SMG8-204ENST00000580498 POLR2JP52435 117 aaKnown RBP18.01■□□□□ 0.47
SMG8-204ENST00000580498 IST1P53990 364 aa18.01■□□□□ 0.47
SMG8-204ENST00000580498 SESN3P58005 492 aa18.01■□□□□ 0.47
SMG8-204ENST00000580498 RAC3P60763 192 aa18.01■□□□□ 0.47
SMG8-204ENST00000580498 KCNJ10P78508 379 aa18.01■□□□□ 0.47
SMG8-204ENST00000580498 GUSBP1Q15486 140 aa18.01■□□□□ 0.47
SMG8-204ENST00000580498 PAMR1Q6UXH9 720 aa18.01■□□□□ 0.47
SMG8-204ENST00000580498 RNF128Q8TEB7 428 aa18.01■□□□□ 0.47
SMG8-204ENST00000580498 OR5B2Q96R09 309 aa18.01■□□□□ 0.47
SMG8-204ENST00000580498 FOXC2Q99958 501 aa18.01■□□□□ 0.47
SMG8-204ENST00000580498 MTHFD2LQ9H903 347 aaPredicted RBP18.01■□□□□ 0.47
SMG8-204ENST00000580498 EXOSC3Q9NQT5 275 aaKnown RBP18.01■□□□□ 0.47
SMG8-204ENST00000580498 SDR39U1Q9NRG7 319 aaPredicted RBP18.01■□□□□ 0.47
SMG8-204ENST00000580498 ACER3Q9NUN7 267 aa18.01■□□□□ 0.47
SMG8-204ENST00000580498 KLHL28Q9NXS3 571 aa18.01■□□□□ 0.47
SMG8-204ENST00000580498 HMGB1P1B2RPK0 211 aaPredicted RBP18■□□□□ 0.47
SMG8-204ENST00000580498 C9JVG2 144 aa18■□□□□ 0.47
SMG8-204ENST00000580498 GSNP06396 782 aa18■□□□□ 0.47
SMG8-204ENST00000580498 DBIP07108 87 aaKnown RBP18■□□□□ 0.47
SMG8-204ENST00000580498 TFPIP10646 304 aa18■□□□□ 0.47
SMG8-204ENST00000580498 ENPP1P22413 925 aa18■□□□□ 0.47
SMG8-204ENST00000580498 IL12AP29459 219 aa18■□□□□ 0.47
SMG8-204ENST00000580498 AGTR1P30556 359 aa18■□□□□ 0.47
SMG8-204ENST00000580498 CRATP43155 626 aa18■□□□□ 0.47
SMG8-204ENST00000580498 PPP2R2AP63151 447 aa18■□□□□ 0.47
SMG8-204ENST00000580498 IRX1P78414 480 aaPredicted RBP18■□□□□ 0.47
SMG8-204ENST00000580498 POU4F3Q15319 338 aa18■□□□□ 0.47
SMG8-204ENST00000580498 TOMM34Q15785 309 aaPredicted RBP18■□□□□ 0.47
SMG8-204ENST00000580498 ZSWIM7Q19AV6 140 aa18■□□□□ 0.47
SMG8-204ENST00000580498 DNAJC14Q6Y2X3 702 aaPredicted RBP18■□□□□ 0.47
SMG8-204ENST00000580498 FRRS1Q6ZNA5 592 aa18■□□□□ 0.47
SMG8-204ENST00000580498 ZNF440Q8IYI8 595 aa18■□□□□ 0.47
SMG8-204ENST00000580498 WDR60Q8WVS4 1066 aa18■□□□□ 0.47
SMG8-204ENST00000580498 ROBO4Q8WZ75 1007 aa18■□□□□ 0.47
SMG8-204ENST00000580498 NRGNQ92686 78 aa18■□□□□ 0.47
SMG8-204ENST00000580498 MARK4Q96L34 752 aa18■□□□□ 0.47
SMG8-204ENST00000580498 NPAS1Q99742 590 aa18■□□□□ 0.47
SMG8-204ENST00000580498 INPP5KQ9BT40 448 aa18■□□□□ 0.47
SMG8-204ENST00000580498 C12orf49Q9H741 205 aa18■□□□□ 0.47
SMG8-204ENST00000580498 TCF7L2Q9NQB0 619 aa18■□□□□ 0.47
SMG8-204ENST00000580498 CCM2LQ9NUG4 571 aaPredicted RBP18■□□□□ 0.47
SMG8-204ENST00000580498 KLHL13Q9P2N7 655 aa18■□□□□ 0.47
SMG8-204ENST00000580498 PLEKHA6Q9Y2H5 1048 aa18■□□□□ 0.47
SMG8-204ENST00000580498 FAM234BA2RU67 622 aa17.99■□□□□ 0.47
SMG8-204ENST00000580498 ETV2O00321 342 aaPredicted RBP17.99■□□□□ 0.47
SMG8-204ENST00000580498 NTN1O95631 604 aa17.99■□□□□ 0.47
SMG8-204ENST00000580498 HRGP04196 525 aa17.99■□□□□ 0.47
SMG8-204ENST00000580498 ZCCHC18P0CG32 403 aa17.99■□□□□ 0.47
SMG8-204ENST00000580498 RYKP34925 604 aa17.99■□□□□ 0.47
SMG8-204ENST00000580498 PGM1P36871 562 aa17.99■□□□□ 0.47
SMG8-204ENST00000580498 CRISP3P54108 245 aa17.99■□□□□ 0.47
SMG8-204ENST00000580498 CHRNEQ04844 493 aa17.99■□□□□ 0.47
SMG8-204ENST00000580498 GRINAQ7Z429 371 aa17.99■□□□□ 0.47
SMG8-204ENST00000580498 PNPT1Q8TCS8 783 aaKnown RBP17.99■□□□□ 0.47
SMG8-204ENST00000580498 WFIKKN1Q96NZ8 548 aa17.99■□□□□ 0.47
SMG8-204ENST00000580498 USB1Q9BQ65 265 aaKnown RBP17.99■□□□□ 0.47
SMG8-204ENST00000580498 HDHD5Q9BXW7 423 aa17.99■□□□□ 0.47
SMG8-204ENST00000580498 OR10A4Q9H209 315 aa17.99■□□□□ 0.47
SMG8-204ENST00000580498 INTS9Q9NV88 658 aaKnown RBP17.99■□□□□ 0.47
SMG8-204ENST00000580498 PRDM4Q9UKN5 801 aa17.99■□□□□ 0.47
SMG8-204ENST00000580498 ZNF232Q9UNY5 417 aa17.99■□□□□ 0.47
SMG8-204ENST00000580498 GPR52Q9Y2T5 361 aa17.99■□□□□ 0.47
SMG8-204ENST00000580498 HEATR5AQ86XA9 2040 aa17.98■□□□□ 0.47
SMG8-204ENST00000580498 SULT2B1O00204 365 aa17.98■□□□□ 0.47
SMG8-204ENST00000580498 YES1P07947 543 aa17.98■□□□□ 0.47
SMG8-204ENST00000580498 CRYGSP22914 178 aa17.98■□□□□ 0.47
SMG8-204ENST00000580498 CDKN2CP42773 168 aa17.98■□□□□ 0.47
SMG8-204ENST00000580498 CLK1P49759 484 aaKnown RBP17.98■□□□□ 0.47
SMG8-204ENST00000580498 DSTNP60981 165 aa17.98■□□□□ 0.47
SMG8-204ENST00000580498 SYPL1Q16563 259 aa17.98■□□□□ 0.47
SMG8-204ENST00000580498 SYT14P1Q58G82 188 aa17.98■□□□□ 0.47
SMG8-204ENST00000580498 AP1ARQ63HQ0 302 aa17.98■□□□□ 0.47
SMG8-204ENST00000580498 EPGNQ6UW88 154 aa17.98■□□□□ 0.47
SMG8-204ENST00000580498 PLEKHM3Q6ZWE6 761 aa17.98■□□□□ 0.47
SMG8-204ENST00000580498 FAM71CQ8NEG0 241 aa17.98■□□□□ 0.47
SMG8-204ENST00000580498 STEAP2Q8NFT2 490 aa17.98■□□□□ 0.47
SMG8-204ENST00000580498 ABHD3Q8WU67 409 aa17.98■□□□□ 0.47
SMG8-204ENST00000580498 ZC3HAV1LQ96H79 300 aaKnown RBP17.98■□□□□ 0.47
SMG8-204ENST00000580498 ALPK1Q96QP1 1244 aa17.98■□□□□ 0.47
SMG8-204ENST00000580498 OR52B2Q96RD2 323 aa17.98■□□□□ 0.47
SMG8-204ENST00000580498 VIPAS39Q9H9C1 493 aa17.98■□□□□ 0.47
SMG8-204ENST00000580498 EMC3Q9P0I2 261 aa17.98■□□□□ 0.47
SMG8-204ENST00000580498 CHRNA9Q9UGM1 479 aa17.98■□□□□ 0.47
SMG8-204ENST00000580498 KCNE5Q9UJ90 142 aa17.98■□□□□ 0.47
SMG8-204ENST00000580498 AGAP5A6NIR3 686 aa17.97■□□□□ 0.47
SMG8-204ENST00000580498 DNAJA2O60884 412 aa17.97■□□□□ 0.47
SMG8-204ENST00000580498 FPR1P21462 350 aa17.97■□□□□ 0.47
SMG8-204ENST00000580498 SHC1P29353 583 aa17.97■□□□□ 0.47
SMG8-204ENST00000580498 MAP2K6P52564 334 aa17.97■□□□□ 0.47
SMG8-204ENST00000580498 COPZ1P61923 177 aa17.97■□□□□ 0.47
SMG8-204ENST00000580498 RASGEF1BQ0VAM2 473 aa17.97■□□□□ 0.47
SMG8-204ENST00000580498 LARS2Q15031 903 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms