RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 SAMD5Q5TGI4 173 aa12.06□□□□□ -0.48
CSNK1D-213ENST00000580446 LIPJQ5W064 366 aa12.06□□□□□ -0.48
CSNK1D-213ENST00000580446 KLHL24Q6TFL4 600 aa12.06□□□□□ -0.48
CSNK1D-213ENST00000580446 CASP12Q6UXS9 341 aa12.06□□□□□ -0.48
CSNK1D-213ENST00000580446 METTL4Q8N3J2 472 aa12.06□□□□□ -0.48
CSNK1D-213ENST00000580446 ACTRT2Q8TDY3 377 aa12.06□□□□□ -0.48
CSNK1D-213ENST00000580446 EQTNQ9NQ60 294 aa12.06□□□□□ -0.48
CSNK1D-213ENST00000580446 SLC7A10Q9NS82 523 aa12.06□□□□□ -0.48
CSNK1D-213ENST00000580446 FARSBQ9NSD9 589 aaKnown RBP12.06□□□□□ -0.48
CSNK1D-213ENST00000580446 KLHL21Q9UJP4 597 aa12.06□□□□□ -0.48
CSNK1D-213ENST00000580446 SLC12A4Q9UP95 1085 aa12.06□□□□□ -0.48
CSNK1D-213ENST00000580446 DYNC2H1Q8NCM8 4307 aaKnown RBP12.05□□□□□ -0.48
CSNK1D-213ENST00000580446 GJE1A6NN92 205 aa12.05□□□□□ -0.48
CSNK1D-213ENST00000580446 ZNF716A6NP11 495 aa12.05□□□□□ -0.48
CSNK1D-213ENST00000580446 FOXE1O00358 373 aaPredicted RBP12.05□□□□□ -0.48
CSNK1D-213ENST00000580446 PLOD3O60568 738 aa12.05□□□□□ -0.48
CSNK1D-213ENST00000580446 CDC14BO60729 498 aa12.05□□□□□ -0.48
CSNK1D-213ENST00000580446 DEAF1O75398 565 aaPredicted RBP12.05□□□□□ -0.48
CSNK1D-213ENST00000580446 IL3P08700 152 aa12.05□□□□□ -0.48
CSNK1D-213ENST00000580446 ELK4P28324 431 aa12.05□□□□□ -0.48
CSNK1D-213ENST00000580446 ALDH3B1P43353 468 aa12.05□□□□□ -0.48
CSNK1D-213ENST00000580446 SLC12A2P55011 1212 aa12.05□□□□□ -0.48
CSNK1D-213ENST00000580446 GLE1Q53GS7 698 aaKnown RBP12.05□□□□□ -0.48
CSNK1D-213ENST00000580446 ABLIM2Q6H8Q1 611 aa12.05□□□□□ -0.48
CSNK1D-213ENST00000580446 C16orf87Q6PH81 154 aa12.05□□□□□ -0.48
CSNK1D-213ENST00000580446 CBLN3Q6UW01 205 aa12.05□□□□□ -0.48
CSNK1D-213ENST00000580446 PAGE2Q7Z2X7 111 aa12.05□□□□□ -0.48
CSNK1D-213ENST00000580446 WDFY1Q8IWB7 410 aa12.05□□□□□ -0.48
CSNK1D-213ENST00000580446 FAM9CQ8IZT9 166 aa12.05□□□□□ -0.48
CSNK1D-213ENST00000580446 CEP70Q8NHQ1 597 aa12.05□□□□□ -0.48
CSNK1D-213ENST00000580446 UBTD2Q8WUN7 234 aa12.05□□□□□ -0.48
CSNK1D-213ENST00000580446 OTUB1Q96FW1 271 aaPredicted RBP12.05□□□□□ -0.48
CSNK1D-213ENST00000580446 DESI2Q9BSY9 194 aa12.05□□□□□ -0.48
CSNK1D-213ENST00000580446 QRSL1Q9H0R6 528 aaKnown RBP12.05□□□□□ -0.48
CSNK1D-213ENST00000580446 AURKAIP1Q9NWT8 199 aaPredicted RBP12.05□□□□□ -0.48
CSNK1D-213ENST00000580446 NUDT4Q9NZJ9 180 aa12.05□□□□□ -0.48
CSNK1D-213ENST00000580446 EMC3Q9P0I2 261 aa12.05□□□□□ -0.48
CSNK1D-213ENST00000580446 ADAM29Q9UKF5 820 aa12.05□□□□□ -0.48
CSNK1D-213ENST00000580446 NUP50Q9UKX7 468 aa12.05□□□□□ -0.48
CSNK1D-213ENST00000580446 OR6C65A6NJZ3 312 aa12.04□□□□□ -0.48
CSNK1D-213ENST00000580446 COQ9O75208 318 aa12.04□□□□□ -0.48
CSNK1D-213ENST00000580446 GUCY1B2O75343 617 aa12.04□□□□□ -0.48
CSNK1D-213ENST00000580446 MRPL33O75394 65 aaKnown RBP12.04□□□□□ -0.48
CSNK1D-213ENST00000580446 WNT11O96014 354 aa12.04□□□□□ -0.48
CSNK1D-213ENST00000580446 JUNP05412 331 aaKnown RBP12.04□□□□□ -0.48
CSNK1D-213ENST00000580446 ACHEP22303 614 aa12.04□□□□□ -0.48
CSNK1D-213ENST00000580446 DLG1Q12959 904 aa12.04□□□□□ -0.48
CSNK1D-213ENST00000580446 TSPO2Q5TGU0 170 aa12.04□□□□□ -0.48
CSNK1D-213ENST00000580446 RUSC1-AS1Q66K80 236 aa12.04□□□□□ -0.48
CSNK1D-213ENST00000580446 GOLGA7Q7Z5G4 137 aa12.04□□□□□ -0.48
CSNK1D-213ENST00000580446 C1orf52Q8N6N3 182 aaKnown RBP12.04□□□□□ -0.48
CSNK1D-213ENST00000580446 OR4F5Q8NH21 305 aa12.04□□□□□ -0.48
CSNK1D-213ENST00000580446 RDH5Q92781 318 aa12.04□□□□□ -0.48
CSNK1D-213ENST00000580446 ERP27Q96DN0 273 aa12.04□□□□□ -0.48
CSNK1D-213ENST00000580446 KTI12Q96EK9 354 aaPredicted RBP12.04□□□□□ -0.48
CSNK1D-213ENST00000580446 KATNB1Q9BVA0 655 aa12.04□□□□□ -0.48
CSNK1D-213ENST00000580446 FAIM2Q9BWQ8 316 aa12.04□□□□□ -0.48
CSNK1D-213ENST00000580446 UPB1Q9UBR1 384 aa12.04□□□□□ -0.48
CSNK1D-213ENST00000580446 WNK2Q9Y3S1 2297 aa12.04□□□□□ -0.48
CSNK1D-213ENST00000580446 CCDC188H7C350 402 aa12.03□□□□□ -0.48
CSNK1D-213ENST00000580446 UPK1AO00322 258 aa12.03□□□□□ -0.48
CSNK1D-213ENST00000580446 HOXA3O43365 443 aaPredicted RBP12.03□□□□□ -0.48
CSNK1D-213ENST00000580446 RP2O75695 350 aa12.03□□□□□ -0.48
CSNK1D-213ENST00000580446 SEC14L2O76054 403 aa12.03□□□□□ -0.48
CSNK1D-213ENST00000580446 IPO7O95373 1038 aaKnown RBP12.03□□□□□ -0.48
CSNK1D-213ENST00000580446 MBD3O95983 291 aa12.03□□□□□ -0.48
CSNK1D-213ENST00000580446 ANPEPP15144 967 aa12.03□□□□□ -0.48
CSNK1D-213ENST00000580446 EIF1P41567 113 aaKnown RBP12.03□□□□□ -0.48
CSNK1D-213ENST00000580446 ELK3P41970 407 aa12.03□□□□□ -0.48
CSNK1D-213ENST00000580446 ALKBH6Q3KRA9 238 aa12.03□□□□□ -0.48
CSNK1D-213ENST00000580446 CCNJQ5T5M9 372 aa12.03□□□□□ -0.48
CSNK1D-213ENST00000580446 RNASEH2BQ5TBB1 312 aaKnown RBP12.03□□□□□ -0.48
CSNK1D-213ENST00000580446 SAXO2Q658L1 398 aa12.03□□□□□ -0.48
CSNK1D-213ENST00000580446 KRT80Q6KB66 452 aa12.03□□□□□ -0.48
CSNK1D-213ENST00000580446 ANKRD16Q6P6B7 361 aa12.03□□□□□ -0.48
CSNK1D-213ENST00000580446 REC114Q7Z4M0 266 aa12.03□□□□□ -0.48
CSNK1D-213ENST00000580446 GAS2L3Q86XJ1 694 aa12.03□□□□□ -0.48
CSNK1D-213ENST00000580446 CCDC103Q8IW40 242 aa12.03□□□□□ -0.48
CSNK1D-213ENST00000580446 GSPT2Q8IYD1 628 aaKnown RBP12.03□□□□□ -0.48
CSNK1D-213ENST00000580446 C17orf78Q8N4C9 275 aa12.03□□□□□ -0.48
CSNK1D-213ENST00000580446 RFWD2Q8NHY2 731 aa12.03□□□□□ -0.48
CSNK1D-213ENST00000580446 GPR151Q8TDV0 419 aa12.03□□□□□ -0.48
CSNK1D-213ENST00000580446 SYT3Q9BQG1 590 aa12.03□□□□□ -0.48
CSNK1D-213ENST00000580446 IPPKQ9H8X2 491 aa12.03□□□□□ -0.48
CSNK1D-213ENST00000580446 TCF7L1Q9HCS4 588 aa12.03□□□□□ -0.48
CSNK1D-213ENST00000580446 C1RLQ9NZP8 487 aa12.03□□□□□ -0.48
CSNK1D-213ENST00000580446 REV1Q9UBZ9 1251 aa12.03□□□□□ -0.48
CSNK1D-213ENST00000580446 TESQ9UGI8 421 aaKnown RBP12.03□□□□□ -0.48
CSNK1D-213ENST00000580446 MRTO4Q9UKD2 239 aaKnown RBP12.03□□□□□ -0.48
CSNK1D-213ENST00000580446 FZR1Q9UM11 496 aa12.03□□□□□ -0.48
CSNK1D-213ENST00000580446 IGKV3D-15A0A087WSY6 115 aa12.02□□□□□ -0.49
CSNK1D-213ENST00000580446 CLPSL1A2RUU4 121 aa12.02□□□□□ -0.49
CSNK1D-213ENST00000580446 CLDN34H7C241 214 aa12.02□□□□□ -0.49
CSNK1D-213ENST00000580446 KCNH1O95259 989 aa12.02□□□□□ -0.49
CSNK1D-213ENST00000580446 PRKCAP17252 672 aa12.02□□□□□ -0.49
CSNK1D-213ENST00000580446 TIA1P31483 386 aaKnown RBP eCLIP12.02□□□□□ -0.49
CSNK1D-213ENST00000580446 DIO1P49895 249 aa12.02□□□□□ -0.49
CSNK1D-213ENST00000580446 PSMD4P55036 377 aaKnown RBP12.02□□□□□ -0.49
CSNK1D-213ENST00000580446 ATP6V0D1P61421 351 aa12.02□□□□□ -0.49
CSNK1D-213ENST00000580446 HNRNPA0Q13151 305 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms