RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 AGAP5A6NIR3 686 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 CCL21O00585 134 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 SCDO00767 359 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 AP3D1O14617 1153 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 ANGPT2O15123 496 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 HCRTR2O43614 444 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 ZG16O60844 167 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 SHOX2O60902 331 aaPredicted RBP8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 KRT75O95678 551 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 EPPINO95925 133 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 AK1P00568 194 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 GUSBP08236 651 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 LINGO3P0C6S8 592 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 NR2F1P10589 423 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 GPX2P18283 190 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 SHC1P29353 583 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 LCN1P31025 176 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 PGM1P36871 562 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 LHX2P50458 406 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 SUCLG1P53597 346 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 DSCR4P56555 118 aaPredicted RBP8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 CLDN20P56880 219 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 PCBP3P57721 371 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 EGR3Q06889 387 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 C17orf67Q0P5P2 114 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 NFYCQ13952 458 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 FGFBP1Q14512 234 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 PLPPR5Q32ZL2 321 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 NHSL2Q5HYW2 709 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 ATAD3BQ5T9A4 648 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 POMZP3Q6PJE2 187 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 LRRC74BQ6ZQY2 392 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 CPLX4Q7Z7G2 160 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 VRK2Q86Y07 508 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 ULK2Q8IYT8 1036 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 OR14L1PQ8NHC6 308 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 B4GALNT2Q8NHY0 566 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 NFKBIDQ8NI38 313 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 CGREF1Q99674 301 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 TREX2Q9BQ50 279 aaPredicted RBP8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 WFDC6Q9BQY6 131 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 EXO5Q9H790 373 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 A4GALTQ9NPC4 353 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 MED17Q9NVC6 651 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 EXD2Q9NVH0 621 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 RLIMQ9NVW2 624 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 PFDN2Q9UHV9 154 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 DKKL1Q9UK85 242 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 MEMO1Q9Y316 297 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 ZNF337Q9Y3M9 751 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 PCDHGB3Q9Y5G1 929 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 CAPN7Q9Y6W3 813 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 ESPL1Q14674 2120 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 CSMD2Q7Z408 3487 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 PCNX3Q9H6A9 2034 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 MED12Q93074 2177 aa8.54□□□□□ -1.04
NPLOC4-219ENST00000576713 TACC2O95359 2948 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 SVILO95425 2214 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 PTPN13Q12923 2485 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 OR14I1A6ND48 311 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 MRASO14807 208 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 TBX1O43435 398 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 TOXO94900 526 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 AGFG2O95081 481 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 ZNF205O95201 554 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 CLDN1O95832 211 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 AGR2O95994 175 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 OPN1LWP04000 364 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 UBTFL6P0CB48 400 aaPredicted RBP8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 UBL4AP11441 157 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 COX4I1P13073 169 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 PRG2P13727 222 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 HK1P19367 917 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 CRYBA2P53672 197 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 CLDN18P56856 261 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 EEF1A1P68104 462 aaKnown RBP8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 TEKQ02763 1124 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 FOXF1Q12946 379 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 TRMT5Q32P41 509 aaKnown RBP8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 GLIPR1L2Q4G1C9 344 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 HIST2H2BCQ6DN03 193 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 NANOGP8Q6NSW7 305 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 C8orf82Q6P1X6 216 aaPredicted RBP8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 ZNF585AQ6P3V2 769 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 RPTNQ6XPR3 784 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 ZNF836Q6ZNA1 936 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 GGNQ86UU5 652 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 IFNEQ86WN2 208 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 ZZZ3Q8IYH5 903 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 CLIP4Q8N3C7 705 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 NAXEQ8NCW5 288 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 GPR119Q8TDV5 335 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 TSPEARQ8WU66 669 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 ITLN2Q8WWU7 325 aaPredicted RBP8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 ABTB1Q969K4 478 aaPredicted RBP8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 LRRC58Q96CX6 371 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 RNF145Q96MT1 663 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 CCT8L2Q96SF2 557 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 TUBA1CQ9BQE3 449 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms