RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 CLIP4Q8N3C7 705 aa7.15□□□□□ -1.26
CCDC40-215ENST00000576033 FAM71CQ8NEG0 241 aa7.15□□□□□ -1.26
CCDC40-215ENST00000576033 OR10Q1Q8NGQ4 319 aa7.15□□□□□ -1.26
CCDC40-215ENST00000576033 FAM57AQ8TBR7 257 aa7.15□□□□□ -1.26
CCDC40-215ENST00000576033 CCDC120Q96HB5 630 aa7.15□□□□□ -1.26
CCDC40-215ENST00000576033 NSMCE2Q96MF7 247 aa7.15□□□□□ -1.26
CCDC40-215ENST00000576033 SFXN2Q96NB2 322 aa7.15□□□□□ -1.26
CCDC40-215ENST00000576033 TREX2Q9BQ50 279 aaPredicted RBP7.15□□□□□ -1.26
CCDC40-215ENST00000576033 THUMPD3Q9BV44 507 aaKnown RBP7.15□□□□□ -1.26
CCDC40-215ENST00000576033 SAP130Q9H0E3 1048 aa7.15□□□□□ -1.26
CCDC40-215ENST00000576033 MAGIXQ9H6Y5 334 aa7.15□□□□□ -1.26
CCDC40-215ENST00000576033 A4GALTQ9NPC4 353 aa7.15□□□□□ -1.26
CCDC40-215ENST00000576033 DCAF13Q9NV06 445 aaKnown RBP7.15□□□□□ -1.26
CCDC40-215ENST00000576033 MED17Q9NVC6 651 aa7.15□□□□□ -1.26
CCDC40-215ENST00000576033 EXD2Q9NVH0 621 aa7.15□□□□□ -1.26
CCDC40-215ENST00000576033 DNAJB12Q9NXW2 375 aaKnown RBP7.15□□□□□ -1.26
CCDC40-215ENST00000576033 ALKBH4Q9NXW9 302 aa7.15□□□□□ -1.26
CCDC40-215ENST00000576033 B4GALT7Q9UBV7 327 aa7.15□□□□□ -1.26
CCDC40-215ENST00000576033 MRTO4Q9UKD2 239 aaKnown RBP7.15□□□□□ -1.26
CCDC40-215ENST00000576033 ICAM5Q9UMF0 924 aa7.15□□□□□ -1.26
CCDC40-215ENST00000576033 CORO2BQ9UQ03 480 aa7.15□□□□□ -1.26
CCDC40-215ENST00000576033 CAMK2AQ9UQM7 478 aa7.15□□□□□ -1.26
CCDC40-215ENST00000576033 ZNF443Q9Y2A4 671 aaPredicted RBP7.15□□□□□ -1.26
CCDC40-215ENST00000576033 ZNF835Q9Y2P0 537 aa7.15□□□□□ -1.26
CCDC40-215ENST00000576033 DTNAQ9Y4J8 743 aa7.15□□□□□ -1.26
CCDC40-215ENST00000576033 FAM215AQ9Y5M1 114 aa7.15□□□□□ -1.26
CCDC40-215ENST00000576033 ADGRG4Q8IZF6 3080 aa7.15□□□□□ -1.27
CCDC40-215ENST00000576033 PHF3Q92576 2039 aaKnown RBP7.15□□□□□ -1.27
CCDC40-215ENST00000576033 MYO7BQ6PIF6 2116 aa7.15□□□□□ -1.27
CCDC40-215ENST00000576033 ASH1LQ9NR48 2969 aaKnown RBP7.14□□□□□ -1.27
CCDC40-215ENST00000576033 IGLV3-32A0A0A0MS00 114 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 A0A1B0GVC2 190 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 A0A1W2PQD3 144 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 OR2M5A3KFT3 312 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 CLEC18AA5D8T8 446 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 AGAP5A6NIR3 686 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 CXCR6O00574 342 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 AQP7O14520 342 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 SEC14L5O43304 696 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 EFNA2O43921 213 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 TPST1O60507 370 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 MPDZO75970 2070 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 CSTAP01040 98 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 SEMG1P04279 462 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 NGFRP08138 427 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 STSP08842 583 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 LINGO3P0C6S8 592 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 HPGDP15428 266 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 ELAVL4P26378 380 aaKnown RBP7.14□□□□□ -1.27
CCDC40-215ENST00000576033 SRD5A2P31213 254 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 RYKP34925 604 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 PCGF2P35227 344 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 ADH7P40394 386 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 MAGEA2P43356 314 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 LHX2P50458 406 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 SUCLG1P53597 346 aaKnown RBP7.14□□□□□ -1.27
CCDC40-215ENST00000576033 AQP4P55087 323 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 CLDN18P56856 261 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 EEF1A1P68104 462 aaKnown RBP7.14□□□□□ -1.27
CCDC40-215ENST00000576033 SCARB2Q14108 478 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 ATP6AP1Q15904 470 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 CYP51A1Q16850 503 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 TMEM44Q2T9K0 475 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 INTS11Q5TA45 600 aaKnown RBP7.14□□□□□ -1.27
CCDC40-215ENST00000576033 PPP4R4Q6NUP7 873 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 CLEC18BQ6UXF7 455 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 Q6ZPB1 254 aaPredicted RBP7.14□□□□□ -1.27
CCDC40-215ENST00000576033 FKBP9P1Q75LS8 142 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 GGNQ86UU5 652 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 TSPYL5Q86VY4 417 aaPredicted RBP7.14□□□□□ -1.27
CCDC40-215ENST00000576033 EPHX4Q8IUS5 362 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 LACC1Q8IV20 430 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 EID3Q8N140 333 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 PACRGLQ8N7B6 248 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 SMYD1Q8NB12 490 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 CLEC18CQ8NCF0 446 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 NAXEQ8NCW5 288 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 ATP6V1C2Q8NEY4 427 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 OR4D11Q8NGI4 311 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 B4GALNT2Q8NHY0 566 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 LRTOMTQ8WZ04 291 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 CENPNQ96H22 339 aaPredicted RBP7.14□□□□□ -1.27
CCDC40-215ENST00000576033 WDYHV1Q96HA8 205 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 ZNF845Q96IR2 970 aaPredicted RBP7.14□□□□□ -1.27
CCDC40-215ENST00000576033 DOCK7Q96N67 2140 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 TRNT1Q96Q11 434 aaKnown RBP7.14□□□□□ -1.27
CCDC40-215ENST00000576033 TIMP4Q99727 224 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 TUBA1CQ9BQE3 449 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 ACKR4Q9NPB9 350 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 C8orf4Q9NR00 106 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 ZNF337Q9Y3M9 751 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 CSMD2Q7Z408 3487 aa7.14□□□□□ -1.27
CCDC40-215ENST00000576033 MED12LQ86YW9 2145 aa7.13□□□□□ -1.27
CCDC40-215ENST00000576033 CRYBG3Q68DQ2 2970 aa7.13□□□□□ -1.27
CCDC40-215ENST00000576033 DUXAA6NLW8 204 aa7.13□□□□□ -1.27
CCDC40-215ENST00000576033 EVPLLA8MZ36 301 aa7.13□□□□□ -1.27
CCDC40-215ENST00000576033 TMEM229AB2RXF0 380 aa7.13□□□□□ -1.27
CCDC40-215ENST00000576033 CCL21O00585 134 aa7.13□□□□□ -1.27
CCDC40-215ENST00000576033 DLGAP1O14490 977 aa7.13□□□□□ -1.27
CCDC40-215ENST00000576033 ZNF264O43296 627 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms