RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 H6PDO95479 791 aa8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 TGFAP01135 160 aa8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 IGHV3-9P01782 118 aa8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 HMGN2P05204 90 aaKnown RBP8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 DIO1P49895 249 aa8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 PDLIM4P50479 330 aa8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 FOXG1P55316 489 aaPredicted RBP8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 PDE7AQ13946 482 aa8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 MLC1Q15049 377 aa8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 NDUFAF6Q330K2 333 aa8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 OR7E24Q6IFN5 339 aa8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 TMPPEQ6ZT21 453 aa8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 ZNF572Q7Z3I7 529 aaPredicted RBP8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 MEX3DQ86XN8 651 aaKnown RBP8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 UBE2J2Q8N2K1 259 aa8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 WDR31Q8NA23 367 aa8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 ZNF527Q8NB42 609 aa8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 OR5W2Q8NH69 310 aa8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 CDS1Q92903 461 aa8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 PPCDCQ96CD2 204 aa8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 FAM120BQ96EK7 910 aaKnown RBP8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 FCRL1Q96LA6 429 aa8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 FOXN4Q96NZ1 517 aa8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 OR5B2Q96R09 309 aa8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 SOX7Q9BT81 388 aa8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 C1QTNF6Q9BXI9 259 aa8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 KRTAP3-3Q9BYR6 98 aa8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 KRTAP3-2Q9BYR7 98 aa8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 TNFRSF12AQ9NP84 129 aa8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 RRAGDQ9NQL2 400 aaPredicted RBP8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 SIRT3Q9NTG7 399 aaPredicted RBP8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 ASB6Q9NWX5 421 aa8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 MALT1Q9UDY8 824 aa8.74□□□□□ -1.01
CALCOCO2-227ENST00000575560 PKD1L1Q8TDX9 2849 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 NPIPA5A0A0B4J1W7 369 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 LOC390937A0A1W2PQ73 354 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 CCT8L1PA6NM43 557 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 NPIPA7E9PJI5 369 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 H3BNH8 94 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 PDLIM1O00151 329 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 GTPBP1O00178 669 aaKnown RBP8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 AKAP10O43572 662 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 SPRY1O43609 319 aaPredicted RBP8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 EIF4E2O60573 245 aaKnown RBP8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 ITGA5P08648 1049 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 NPIPA8P0DM63 369 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 APEHP13798 732 aaKnown RBP8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 ZNF23P17027 643 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 CFPP27918 469 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 RNF144AP50876 292 aaPredicted RBP8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 ATP12AP54707 1039 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 PHC1P78364 1004 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 QPRTQ15274 297 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 CR1LQ2VPA4 569 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 TIGD2Q4W5G0 525 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 ABLIM2Q6H8Q1 611 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 C3orf33Q6P1S2 294 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 SZRD1Q7Z422 152 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 MTDHQ86UE4 582 aaKnown RBP8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 TOR1AIP2Q8NFQ8 470 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 JADE3Q92613 823 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 APH1AQ96BI3 265 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 SORCS2Q96PQ0 1159 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 PIMREGQ9BSJ6 248 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 FKRPQ9H9S5 495 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 TAS2R16Q9NYV7 291 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 EMC3Q9P0I2 261 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 SH3BP4Q9P0V3 963 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 NOSIPQ9Y314 301 aaKnown RBP8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 DTNAQ9Y4J8 743 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 ATP23Q9Y6H3 246 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 KCNE3Q9Y6H6 103 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.73□□□□□ -1.017e-8■■■□□ 15.4
CALCOCO2-227ENST00000575560 ARFGEF3Q5TH69 2177 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 MGAM2Q2M2H8 2515 aa8.73□□□□□ -1.01
CALCOCO2-227ENST00000575560 G3V2L1 256 aa8.72□□□□□ -1.01
CALCOCO2-227ENST00000575560 H3BQF6 201 aa8.72□□□□□ -1.01
CALCOCO2-227ENST00000575560 SULT2B1O00204 365 aa8.72□□□□□ -1.01
CALCOCO2-227ENST00000575560 ZNF264O43296 627 aa8.72□□□□□ -1.01
CALCOCO2-227ENST00000575560 KIAA0513O60268 411 aa8.72□□□□□ -1.01
CALCOCO2-227ENST00000575560 ITGA2P17301 1181 aa8.72□□□□□ -1.01
CALCOCO2-227ENST00000575560 SDC1P18827 310 aa8.72□□□□□ -1.01
CALCOCO2-227ENST00000575560 EFNA1P20827 205 aaPredicted RBP8.72□□□□□ -1.01
CALCOCO2-227ENST00000575560 ATP6V1C1P21283 382 aa8.72□□□□□ -1.01
CALCOCO2-227ENST00000575560 GCAP28676 217 aa8.72□□□□□ -1.01
CALCOCO2-227ENST00000575560 SLC16A1P53985 500 aa8.72□□□□□ -1.01
CALCOCO2-227ENST00000575560 SESN3P58005 492 aa8.72□□□□□ -1.01
CALCOCO2-227ENST00000575560 CSNK2A1P68400 391 aaPredicted RBP8.72□□□□□ -1.01
CALCOCO2-227ENST00000575560 SLC25A3Q00325 362 aa8.72□□□□□ -1.01
CALCOCO2-227ENST00000575560 CBFBQ13951 182 aa8.72□□□□□ -1.01
CALCOCO2-227ENST00000575560 LASP1Q14847 261 aaKnown RBP8.72□□□□□ -1.01
CALCOCO2-227ENST00000575560 DCST2Q5T1A1 773 aa8.72□□□□□ -1.01
CALCOCO2-227ENST00000575560 C1QTNF12Q5T7M4 302 aa8.72□□□□□ -1.01
CALCOCO2-227ENST00000575560 CDC73Q6P1J9 531 aa8.72□□□□□ -1.01
CALCOCO2-227ENST00000575560 CCNYL1Q8N7R7 359 aa8.72□□□□□ -1.01
CALCOCO2-227ENST00000575560 ZNF454Q8N9F8 522 aa8.72□□□□□ -1.01
CALCOCO2-227ENST00000575560 ZNF540Q8NDQ6 660 aa8.72□□□□□ -1.01
CALCOCO2-227ENST00000575560 ARL8AQ96BM9 186 aa8.72□□□□□ -1.01
CALCOCO2-227ENST00000575560 C3orf49Q96BT1 292 aa8.72□□□□□ -1.01
CALCOCO2-227ENST00000575560 CCT7Q99832 543 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms