RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 GSC2O15499 205 aa13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 ZNHIT1O43257 154 aa13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 PEPDP12955 493 aa13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 PRG2P13727 222 aa13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 POU3F2P20265 443 aaPredicted RBP13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 ADH6P28332 368 aa13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 ACAA2P42765 397 aaKnown RBP13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 HTR3AP46098 478 aa13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 STARP49675 285 aa13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 CASP6P55212 293 aa13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 HOXC5Q00444 222 aa13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 TRIM25Q14258 630 aaKnown RBP13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 VASNQ6EMK4 673 aa13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 WBP2NLQ6ICG8 309 aa13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 CBLL1Q75N03 491 aa13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 GRINAQ7Z429 371 aa13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 CARM1Q86X55 608 aa13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 DHFR2Q86XF0 187 aa13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 ATP6V1C2Q8NEY4 427 aa13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 OR10Q1Q8NGQ4 319 aa13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 RNF217Q8TC41 542 aa13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 LRGUKQ96M69 825 aa13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 MCHR1Q99705 422 aa13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 ARHGDIGQ99819 225 aa13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 ZNF559Q9BR84 538 aa13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 UGT2B28Q9BY64 529 aa13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 TRIM2Q9C040 744 aa13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 GORASP2Q9H8Y8 452 aa13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 SERINC1Q9NRX5 453 aa13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 SELENONQ9NZV5 590 aa13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 SPRR3Q9UBC9 169 aa13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 TESQ9UGI8 421 aaKnown RBP13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 SAMD4AQ9UPU9 718 aaKnown RBP13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 CAMK2AQ9UQM7 478 aa13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 ZNF337Q9Y3M9 751 aa13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 PHF3Q92576 2039 aaKnown RBP13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 BSNQ9UPA5 3926 aa13.13□□□□□ -0.31
NPLOC4-218ENST00000574964 C7orf72A4D263 438 aa13.12□□□□□ -0.31
NPLOC4-218ENST00000574964 FAAHO00519 579 aa13.12□□□□□ -0.31
NPLOC4-218ENST00000574964 ADAM11O75078 769 aa13.12□□□□□ -0.31
NPLOC4-218ENST00000574964 EPPINO95925 133 aa13.12□□□□□ -0.31
NPLOC4-218ENST00000574964 CRYBA2P53672 197 aa13.12□□□□□ -0.31
NPLOC4-218ENST00000574964 GFRA1P56159 465 aa13.12□□□□□ -0.31
NPLOC4-218ENST00000574964 B3GALT5-AS1P59052 145 aa13.12□□□□□ -0.31
NPLOC4-218ENST00000574964 SRYQ05066 204 aa13.12□□□□□ -0.31
NPLOC4-218ENST00000574964 CRYZQ08257 329 aaKnown RBP13.12□□□□□ -0.31
NPLOC4-218ENST00000574964 MRPL49Q13405 166 aaKnown RBP13.12□□□□□ -0.31
NPLOC4-218ENST00000574964 NRF1Q16656 503 aa13.12□□□□□ -0.31
NPLOC4-218ENST00000574964 IFI44LQ53G44 452 aa13.12□□□□□ -0.31
NPLOC4-218ENST00000574964 NHSL2Q5HYW2 709 aa13.12□□□□□ -0.31
NPLOC4-218ENST00000574964 CYP2R1Q6VVX0 501 aa13.12□□□□□ -0.31
NPLOC4-218ENST00000574964 PLEKHM3Q6ZWE6 761 aa13.12□□□□□ -0.31
NPLOC4-218ENST00000574964 CHMP1BQ7LBR1 199 aa13.12□□□□□ -0.31
NPLOC4-218ENST00000574964 COMTD1Q86VU5 262 aa13.12□□□□□ -0.31
NPLOC4-218ENST00000574964 PM20D2Q8IYS1 436 aa13.12□□□□□ -0.31
NPLOC4-218ENST00000574964 UBQLNLQ8IYU4 475 aa13.12□□□□□ -0.31
NPLOC4-218ENST00000574964 EID3Q8N140 333 aa13.12□□□□□ -0.31
NPLOC4-218ENST00000574964 MEIOBQ8N635 442 aa13.12□□□□□ -0.31
NPLOC4-218ENST00000574964 FAM57AQ8TBR7 257 aa13.12□□□□□ -0.31
NPLOC4-218ENST00000574964 POC1BQ8TC44 478 aa13.12□□□□□ -0.31
NPLOC4-218ENST00000574964 RSPO3Q9BXY4 272 aaPredicted RBP13.12□□□□□ -0.31
NPLOC4-218ENST00000574964 CADM1Q9BY67 442 aaKnown RBP13.12□□□□□ -0.31
NPLOC4-218ENST00000574964 ACTR3BQ9P1U1 418 aa13.12□□□□□ -0.31
NPLOC4-218ENST00000574964 PRDM4Q9UKN5 801 aa13.12□□□□□ -0.31
NPLOC4-218ENST00000574964 OSGIN2Q9Y236 505 aa13.12□□□□□ -0.31
NPLOC4-218ENST00000574964 SPIN1Q9Y657 262 aaPredicted RBP13.12□□□□□ -0.31
NPLOC4-218ENST00000574964 AP4B1Q9Y6B7 739 aa13.12□□□□□ -0.31
NPLOC4-218ENST00000574964 V9GYQ6 96 aa13.12□□□□□ -0.31
NPLOC4-218ENST00000574964 PCNX1Q96RV3 2341 aa13.12□□□□□ -0.31
NPLOC4-218ENST00000574964 TRGV8A0A0C4DH27 118 aa13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 GJE1A6NN92 205 aa13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 SEC14L5O43304 696 aa13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 SLC19A2O60779 497 aa13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 CCNA2P20248 432 aa13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 TNFRSF1BP20333 461 aa13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 GNLYP22749 145 aa13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 CXCR1P25024 350 aa13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 ELK4P28324 431 aa13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 TACR3P29371 465 aa13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 IFNA8P32881 189 aa13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 APOBEC1P41238 236 aaKnown RBP13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 SLC1A3P43003 542 aa13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 OR1E2P47887 323 aa13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 POLR2HP52434 150 aaKnown RBP13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 RAC1P63000 192 aa13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 SELENBP1Q13228 472 aa13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 FXNQ16595 210 aa13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 TMEM44Q2T9K0 475 aa13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 SLC25A53Q5H9E4 307 aa13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 ZNF585AQ6P3V2 769 aa13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 DEF8Q6ZN54 512 aa13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 VTCN1Q7Z7D3 282 aa13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 CD163Q86VB7 1156 aa13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 OR6T1Q8NGN1 323 aa13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 OR5M9Q8NGP3 310 aa13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 GEMIN6Q8WXD5 167 aaKnown RBP13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 HSH2DQ96JZ2 352 aa13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 TIMP4Q99727 224 aa13.11□□□□□ -0.31
NPLOC4-218ENST00000574964 NPAS1Q99742 590 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms