RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 DCAF12L2Q5VW00 463 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 KHDRBS2Q5VWX1 349 aaKnown RBP13.37□□□□□ -0.27
SMG6-215ENST00000574501 METTL3Q86U44 580 aaKnown RBP13.37□□□□□ -0.27
SMG6-215ENST00000574501 LURAP1LQ8IV03 231 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 OR9A1PQ8NGU1 263 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 ACOT11Q8WXI4 607 aaPredicted RBP13.37□□□□□ -0.27
SMG6-215ENST00000574501 NSMAFQ92636 917 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 CAMK1GQ96NX5 476 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 DPH1Q9BZG8 443 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 DNTTIP1Q9H147 329 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 CCDC86Q9H6F5 360 aaKnown RBP13.37□□□□□ -0.27
SMG6-215ENST00000574501 EQTNQ9NQ60 294 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 KLHL9Q9P2J3 617 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 FBXL4Q9UKA2 621 aa13.37□□□□□ -0.27
SMG6-215ENST00000574501 SYNDIG1LA6NDD5 238 aa13.36□□□□□ -0.27
SMG6-215ENST00000574501 PYCARD-AS1I3L0S3 204 aa13.36□□□□□ -0.27
SMG6-215ENST00000574501 GOSR2O14653 212 aa13.36□□□□□ -0.27
SMG6-215ENST00000574501 GREM1O60565 184 aa13.36□□□□□ -0.27
SMG6-215ENST00000574501 KRT33AO76009 404 aa13.36□□□□□ -0.27
SMG6-215ENST00000574501 OR5F1O95221 314 aa13.36□□□□□ -0.27
SMG6-215ENST00000574501 ECDO95905 644 aaPredicted RBP13.36□□□□□ -0.27
SMG6-215ENST00000574501 GYPBP06028 91 aa13.36□□□□□ -0.27
SMG6-215ENST00000574501 VSIG10L2P0DP72 767 aa13.36□□□□□ -0.27
SMG6-215ENST00000574501 AKR1A1P14550 325 aa13.36□□□□□ -0.27
SMG6-215ENST00000574501 FRKP42685 505 aaPredicted RBP13.36□□□□□ -0.27
SMG6-215ENST00000574501 ZNF85Q03923 595 aa13.36□□□□□ -0.27
SMG6-215ENST00000574501 ELFN2Q5R3F8 820 aa13.36□□□□□ -0.27
SMG6-215ENST00000574501 C22orf39Q6P5X5 142 aa13.36□□□□□ -0.27
SMG6-215ENST00000574501 Q6ZVU0 165 aa13.36□□□□□ -0.27
SMG6-215ENST00000574501 GDF7Q7Z4P5 450 aa13.36□□□□□ -0.27
SMG6-215ENST00000574501 SLC25A28Q96A46 364 aa13.36□□□□□ -0.27
SMG6-215ENST00000574501 OR14A2Q96R54 314 aa13.36□□□□□ -0.27
SMG6-215ENST00000574501 POLMQ9NP87 494 aaPredicted RBP13.36□□□□□ -0.27
SMG6-215ENST00000574501 LHX9Q9NQ69 397 aa13.36□□□□□ -0.27
SMG6-215ENST00000574501 IRAK3Q9Y616 596 aa13.36□□□□□ -0.27
SMG6-215ENST00000574501 GABARAPH6UMI1 98 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 CDC123O75794 336 aaPredicted RBP13.35□□□□□ -0.27
SMG6-215ENST00000574501 PCDH8O95206 1070 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 NOS3P29474 1203 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 ADH7P40394 386 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 RECQLP46063 649 aaPredicted RBP13.35□□□□□ -0.27
SMG6-215ENST00000574501 PRLHRP49683 370 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 KHKP50053 298 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 NRG3P56975 720 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 POLR2GP62487 172 aaKnown RBP eCLIP13.35□□□□□ -0.27
SMG6-215ENST00000574501 LTB4RQ15722 352 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 TP53I3Q53FA7 332 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 STPG1Q5TH74 334 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 TXNDC8Q6A555 127 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 DMKNQ6E0U4 476 aaPredicted RBP13.35□□□□□ -0.27
SMG6-215ENST00000574501 BAIAP2L2Q6UXY1 529 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 FCRLAQ7L513 359 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 FCAMRQ8WWV6 532 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 OVCA2Q8WZ82 227 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 PAWRQ96IZ0 340 aaKnown RBP13.35□□□□□ -0.27
SMG6-215ENST00000574501 AMDHD1Q96NU7 426 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 TEAD3Q99594 435 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 ADAT1Q9BUB4 502 aaKnown RBP13.35□□□□□ -0.27
SMG6-215ENST00000574501 MFFQ9GZY8 342 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 OR52D1Q9H346 318 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 BCL2L10Q9HD36 194 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 CASP8AP2Q9UKL3 1982 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 NAP1L6A6NFF2 107 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 GPR31O00270 319 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 KLF4O43474 513 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 PRAMEF2O60811 474 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 DUSP11O75319 330 aaKnown RBP13.35□□□□□ -0.27
SMG6-215ENST00000574501 ERAL1O75616 437 aaKnown RBP13.35□□□□□ -0.27
SMG6-215ENST00000574501 STATHP02808 62 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 CTSAP10619 480 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 IL9P15248 144 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 MEOX2P50222 304 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 RAB13P51153 203 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 AP3S2P59780 193 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 CSRP2Q16527 193 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 FAM199XQ6PEV8 388 aaPredicted RBP13.35□□□□□ -0.27
SMG6-215ENST00000574501 CYB561A3Q8NBI2 242 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 BRIX1Q8TDN6 353 aaKnown RBP13.35□□□□□ -0.27
SMG6-215ENST00000574501 WNT2BQ93097 391 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 SLC41A3Q96GZ6 507 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 PEX11GQ96HA9 241 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 LRIG1Q96JA1 1093 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 PBX4Q9BYU1 374 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 SLC25A18Q9H1K4 315 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 TAS2R10Q9NYW0 307 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 AKAP7Q9P0M2 348 aaPredicted RBP13.35□□□□□ -0.27
SMG6-215ENST00000574501 SLC45A1Q9Y2W3 748 aa13.35□□□□□ -0.27
SMG6-215ENST00000574501 ANAPC1Q9H1A4 1944 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 TRAV1-2A0A0B4J238 106 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 A0A0G2JPF8 293 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 OR2W5A6NFC9 320 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 HNRNPCL3B7ZW38 293 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 ATG12O94817 140 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 HNRNPCL4P0DMR1 293 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 CD53P19397 219 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 AKR1C2P52895 323 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 DLX5P56178 289 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 RGS8P57771 180 aaPredicted RBP13.34□□□□□ -0.27
SMG6-215ENST00000574501 FXYD6P3P58550 94 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 RPS15P62841 145 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms