RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 IFT52Q9Y366 437 aa7.01□□□□□ -1.29
SMG6-211ENST00000572369 CAPN7Q9Y6W3 813 aa7.01□□□□□ -1.29
SMG6-211ENST00000572369 HCFC1P51610 2035 aa7□□□□□ -1.29
SMG6-211ENST00000572369 HEATR5AQ86XA9 2040 aa7□□□□□ -1.29
SMG6-211ENST00000572369 TNFSF12-TNFSF13A0A0A6YY99 330 aa7□□□□□ -1.29
SMG6-211ENST00000572369 LOC100653049A0A140TA62 436 aa7□□□□□ -1.29
SMG6-211ENST00000572369 C7orf72A4D263 438 aa7□□□□□ -1.29
SMG6-211ENST00000572369 MBD3L4A6NDZ8 208 aaPredicted RBP7□□□□□ -1.29
SMG6-211ENST00000572369 MBD3L3A6NE82 208 aaPredicted RBP7□□□□□ -1.29
SMG6-211ENST00000572369 AGAP5A6NIR3 686 aa7□□□□□ -1.29
SMG6-211ENST00000572369 MBD3L5A6NJ08 208 aaPredicted RBP7□□□□□ -1.29
SMG6-211ENST00000572369 CLDN24A6NM45 220 aa7□□□□□ -1.29
SMG6-211ENST00000572369 EEF1E1-BLOC1S5C9J1V9 151 aa7□□□□□ -1.29
SMG6-211ENST00000572369 H0YC42 278 aa7□□□□□ -1.29
SMG6-211ENST00000572369 TNFSF11O14788 317 aa7□□□□□ -1.29
SMG6-211ENST00000572369 MRASO14807 208 aa7□□□□□ -1.29
SMG6-211ENST00000572369 EEF1E1O43324 174 aaKnown RBP7□□□□□ -1.29
SMG6-211ENST00000572369 CCDC22O60826 627 aa7□□□□□ -1.29
SMG6-211ENST00000572369 KRT34O76011 436 aa7□□□□□ -1.29
SMG6-211ENST00000572369 TOXO94900 526 aa7□□□□□ -1.29
SMG6-211ENST00000572369 PLGP00747 810 aaPredicted RBP7□□□□□ -1.29
SMG6-211ENST00000572369 NUDT7P0C024 238 aa7□□□□□ -1.29
SMG6-211ENST00000572369 TFPIP10646 304 aa7□□□□□ -1.29
SMG6-211ENST00000572369 FCGR2AP12318 317 aa7□□□□□ -1.29
SMG6-211ENST00000572369 NID1P14543 1247 aa7□□□□□ -1.29
SMG6-211ENST00000572369 PRKCAP17252 672 aa7□□□□□ -1.29
SMG6-211ENST00000572369 SLC6A2P23975 617 aa7□□□□□ -1.29
SMG6-211ENST00000572369 CTSSP25774 331 aa7□□□□□ -1.29
SMG6-211ENST00000572369 ELK4P28324 431 aa7□□□□□ -1.29
SMG6-211ENST00000572369 CEACAM8P31997 349 aaPredicted RBP7□□□□□ -1.29
SMG6-211ENST00000572369 OPRM1P35372 400 aa7□□□□□ -1.29
SMG6-211ENST00000572369 PGM1P36871 562 aa7□□□□□ -1.29
SMG6-211ENST00000572369 MVDP53602 400 aa7□□□□□ -1.29
SMG6-211ENST00000572369 SEC24CP53992 1094 aa7□□□□□ -1.29
SMG6-211ENST00000572369 GYS2P54840 703 aa7□□□□□ -1.29
SMG6-211ENST00000572369 TPD52P55327 224 aaPredicted RBP7□□□□□ -1.29
SMG6-211ENST00000572369 COPZ1P61923 177 aa7□□□□□ -1.29
SMG6-211ENST00000572369 GNGT1P63211 74 aa7□□□□□ -1.29
SMG6-211ENST00000572369 MERTKQ12866 999 aa7□□□□□ -1.29
SMG6-211ENST00000572369 KLF10Q13118 480 aa7□□□□□ -1.29
SMG6-211ENST00000572369 SCARB2Q14108 478 aa7□□□□□ -1.29
SMG6-211ENST00000572369 CDSNQ15517 529 aa7□□□□□ -1.29
SMG6-211ENST00000572369 CYP51A1Q16850 503 aa7□□□□□ -1.29
SMG6-211ENST00000572369 SLC25A35Q3KQZ1 300 aa7□□□□□ -1.29
SMG6-211ENST00000572369 ZNF311Q5JNZ3 666 aa7□□□□□ -1.29
SMG6-211ENST00000572369 MRPL2Q5T653 305 aaKnown RBP7□□□□□ -1.29
SMG6-211ENST00000572369 HBMQ6B0K9 141 aa7□□□□□ -1.29
SMG6-211ENST00000572369 OR2A2Q6IF42 318 aa7□□□□□ -1.29
SMG6-211ENST00000572369 REEP3Q6NUK4 255 aa7□□□□□ -1.29
SMG6-211ENST00000572369 MEX3BQ6ZN04 569 aaKnown RBP7□□□□□ -1.29
SMG6-211ENST00000572369 ZNF836Q6ZNA1 936 aa7□□□□□ -1.29
SMG6-211ENST00000572369 ESPNLQ6ZVH7 1005 aa7□□□□□ -1.29
SMG6-211ENST00000572369 SEM1Q6ZVN7 128 aa7□□□□□ -1.29
SMG6-211ENST00000572369 SPATA21Q7Z572 469 aa7□□□□□ -1.29
SMG6-211ENST00000572369 VRK2Q86Y07 508 aa7□□□□□ -1.29
SMG6-211ENST00000572369 TGIF2LYQ8IUE0 185 aa7□□□□□ -1.29
SMG6-211ENST00000572369 ZNF440Q8IYI8 595 aa7□□□□□ -1.29
SMG6-211ENST00000572369 GCNT2Q8N0V5 402 aa7□□□□□ -1.29
SMG6-211ENST00000572369 DPP10Q8N608 796 aa7□□□□□ -1.29
SMG6-211ENST00000572369 CNEP1R1Q8N9A8 125 aa7□□□□□ -1.29
SMG6-211ENST00000572369 C9orf106Q8NAJ2 232 aa7□□□□□ -1.29
SMG6-211ENST00000572369 PCYOX1LQ8NBM8 494 aa7□□□□□ -1.29
SMG6-211ENST00000572369 OR10D3Q8NH80 312 aa7□□□□□ -1.29
SMG6-211ENST00000572369 MBD3L2Q8NHZ7 208 aaPredicted RBP7□□□□□ -1.29
SMG6-211ENST00000572369 BBS10Q8TAM1 723 aa7□□□□□ -1.29
SMG6-211ENST00000572369 SLC38A5Q8WUX1 472 aa7□□□□□ -1.29
SMG6-211ENST00000572369 C10orf82Q8WW14 230 aa7□□□□□ -1.29
SMG6-211ENST00000572369 ST8SIA1Q92185 356 aa7□□□□□ -1.29
SMG6-211ENST00000572369 CNOT9Q92600 299 aaKnown RBP7□□□□□ -1.29
SMG6-211ENST00000572369 MAL2Q969L2 176 aa7□□□□□ -1.29
SMG6-211ENST00000572369 ZNF845Q96IR2 970 aaPredicted RBP7□□□□□ -1.29
SMG6-211ENST00000572369 KLHL15Q96M94 604 aa7□□□□□ -1.29
SMG6-211ENST00000572369 ZFP3Q96NJ6 502 aa7□□□□□ -1.29
SMG6-211ENST00000572369 ZNF317Q96PQ6 595 aaPredicted RBP7□□□□□ -1.29
SMG6-211ENST00000572369 ZNF607Q96SK3 696 aa7□□□□□ -1.29
SMG6-211ENST00000572369 CGREF1Q99674 301 aa7□□□□□ -1.29
SMG6-211ENST00000572369 NPAS1Q99742 590 aa7□□□□□ -1.29
SMG6-211ENST00000572369 TREX2Q9BQ50 279 aaPredicted RBP7□□□□□ -1.29
SMG6-211ENST00000572369 KLHDC3Q9BQ90 382 aa7□□□□□ -1.29
SMG6-211ENST00000572369 SPATA5L1Q9BVQ7 753 aa7□□□□□ -1.29
SMG6-211ENST00000572369 ZNF385DQ9H6B1 395 aa7□□□□□ -1.29
SMG6-211ENST00000572369 A4GALTQ9NPC4 353 aa7□□□□□ -1.29
SMG6-211ENST00000572369 SLC52A3Q9NQ40 469 aa7□□□□□ -1.29
SMG6-211ENST00000572369 SAR1AQ9NR31 198 aa7□□□□□ -1.29
SMG6-211ENST00000572369 PAQR5Q9NXK6 330 aaPredicted RBP7□□□□□ -1.29
SMG6-211ENST00000572369 ZNF629Q9UEG4 869 aaPredicted RBP7□□□□□ -1.29
SMG6-211ENST00000572369 SLC13A4Q9UKG4 626 aa7□□□□□ -1.29
SMG6-211ENST00000572369 ANGPT4Q9Y264 503 aa7□□□□□ -1.29
SMG6-211ENST00000572369 SPIN1Q9Y657 262 aaPredicted RBP7□□□□□ -1.29
SMG6-211ENST00000572369 MED12Q93074 2177 aa7□□□□□ -1.29
SMG6-211ENST00000572369 DOCK7Q96N67 2140 aa7□□□□□ -1.29
SMG6-211ENST00000572369 ANK2Q01484 3957 aa7□□□□□ -1.29
SMG6-211ENST00000572369 A0A0J9YW62 118 aa6.99□□□□□ -1.29
SMG6-211ENST00000572369 GMNCA6NCL1 334 aa6.99□□□□□ -1.29
SMG6-211ENST00000572369 CFAP73A6NFT4 308 aa6.99□□□□□ -1.29
SMG6-211ENST00000572369 BBIP1A8MTZ0 92 aa6.99□□□□□ -1.29
SMG6-211ENST00000572369 C19orf84I3L1E1 186 aa6.99□□□□□ -1.29
SMG6-211ENST00000572369 CXCL13O43927 109 aa6.99□□□□□ -1.29
SMG6-211ENST00000572369 SMNDC1O75940 238 aaKnown RBP eCLIP6.99□□□□□ -1.29
SMG6-211ENST00000572369 RCBTB2O95199 551 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms