RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 CRMP1Q14194 572 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 RPTNQ6XPR3 784 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 TMPRSS11FQ6ZWK6 438 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 LINGO2Q7L985 606 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 CYB561A3Q8NBI2 242 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 FAM98AQ8NCA5 519 aaKnown RBP9.97□□□□□ -0.81
CCDC40-207ENST00000572253 OR2T35Q8NGX2 323 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 THAP4Q8WY91 577 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 PTP4A1Q93096 173 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 VWCEQ96DN2 955 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 SARGQ9BW04 601 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 ADGRL4Q9HBW9 690 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 PRSS16Q9NQE7 514 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 SLCO1C1Q9NYB5 712 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 ZNF224Q9NZL3 707 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 SPACA6W5XKT8 324 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 TCF20Q9UGU0 1960 aaKnown RBP9.97□□□□□ -0.81
CCDC40-207ENST00000572253 PDCD5O14737 125 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 B3GALT2O43825 422 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 FKTNO75072 461 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 GATBO75879 557 aaKnown RBP9.97□□□□□ -0.81
CCDC40-207ENST00000572253 OR7A10O76100 309 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 PPP1R3DO95685 299 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 ECDO95905 644 aaPredicted RBP9.97□□□□□ -0.81
CCDC40-207ENST00000572253 ACRP10323 421 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 TBXA2RP21731 343 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 VIPR2P41587 438 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 GDI2P50395 445 aaKnown RBP9.97□□□□□ -0.81
CCDC40-207ENST00000572253 ZNF85Q03923 595 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 CAMK1Q14012 370 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 IRF4Q15306 451 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 GRK1Q15835 563 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 CLLU1Q5K131 121 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 DCST2Q5T1A1 773 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 FCRLBQ6BAA4 426 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 GPR139Q6DWJ6 353 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 UBE2Q1Q7Z7E8 422 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 OR2L13Q8N349 312 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 BEST4Q8NFU0 473 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 OR5J2Q8NH18 312 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 SNX33Q8WV41 574 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 LCN9Q8WX39 176 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 LRRC3BQ96PB8 259 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 C6orf106Q9H6K1 298 aaPredicted RBP9.97□□□□□ -0.81
CCDC40-207ENST00000572253 NARFLQ9H6Q4 476 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 MBNL1Q9NR56 388 aaKnown RBP9.97□□□□□ -0.81
CCDC40-207ENST00000572253 ZNF275Q9NSD4 429 aaPredicted RBP9.97□□□□□ -0.81
CCDC40-207ENST00000572253 C20orf141Q9NUB4 165 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 SPATA2Q9UM82 520 aa9.97□□□□□ -0.81
CCDC40-207ENST00000572253 A0A1W2PPK0 400 aa9.96□□□□□ -0.81
CCDC40-207ENST00000572253 M0R233 179 aa9.96□□□□□ -0.81
CCDC40-207ENST00000572253 ZNF593O00488 134 aaPredicted RBP9.96□□□□□ -0.81
CCDC40-207ENST00000572253 GSTZ1O43708 216 aaPredicted RBP9.96□□□□□ -0.81
CCDC40-207ENST00000572253 ZNF888P0CJ79 500 aaPredicted RBP9.96□□□□□ -0.81
CCDC40-207ENST00000572253 EPXP11678 715 aa9.96□□□□□ -0.81
CCDC40-207ENST00000572253 NID1P14543 1247 aa9.96□□□□□ -0.81
CCDC40-207ENST00000572253 EPCAMP16422 314 aa9.96□□□□□ -0.81
CCDC40-207ENST00000572253 ATF1P18846 271 aa9.96□□□□□ -0.81
CCDC40-207ENST00000572253 GDNFP39905 211 aa9.96□□□□□ -0.81
CCDC40-207ENST00000572253 RPE65Q16518 533 aa9.96□□□□□ -0.81
CCDC40-207ENST00000572253 TP53I3Q53FA7 332 aa9.96□□□□□ -0.81
CCDC40-207ENST00000572253 RTL4Q6ZR62 310 aa9.96□□□□□ -0.81
CCDC40-207ENST00000572253 OR11H4Q8NGC9 324 aa9.96□□□□□ -0.81
CCDC40-207ENST00000572253 SMIM4Q8WVI0 70 aa9.96□□□□□ -0.81
CCDC40-207ENST00000572253 HAO2Q9NYQ3 351 aa9.96□□□□□ -0.81
CCDC40-207ENST00000572253 NTMQ9P121 344 aa9.96□□□□□ -0.81
CCDC40-207ENST00000572253 TRPM6Q9BX84 2022 aa9.96□□□□□ -0.81
CCDC40-207ENST00000572253 TRAV27A0A087WT01 109 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 NAP1L6A6NFF2 107 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 AK1P00568 194 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 DRD5P21918 477 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 CTNNB1P35222 781 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 SIM1P81133 766 aaPredicted RBP9.96□□□□□ -0.82
CCDC40-207ENST00000572253 ST3GAL2Q16842 350 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 UBE2NLQ5JXB2 153 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 THSD4Q6ZMP0 1018 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 OVCH1Q7RTY7 1134 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 SLC43A2Q8N370 569 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 KCT2Q8NC54 265 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 ZCCHC10Q8TBK6 192 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 HSD17B8Q92506 261 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 PGLYRP3Q96LB9 341 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 TIMP4Q99727 224 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 ZNF559Q9BR84 538 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 ZNF436Q9C0F3 470 aaPredicted RBP9.96□□□□□ -0.82
CCDC40-207ENST00000572253 ZNF350Q9GZX5 532 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 BEX1Q9HBH7 125 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 DLL4Q9NR61 685 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 SPHK1Q9NYA1 384 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 ZMIZ1Q9ULJ6 1067 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 SIGLEC7Q9Y286 467 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 CTDSPLO15194 276 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 RNGTTO60942 597 aaKnown RBP9.96□□□□□ -0.82
CCDC40-207ENST00000572253 SNAPC5O75971 98 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 PAK4O96013 591 aaPredicted RBP9.96□□□□□ -0.82
CCDC40-207ENST00000572253 HTR2AP28223 471 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 NDUFS1P28331 727 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 SSTR2P30874 369 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 EXOSC2Q13868 293 aaKnown RBP9.96□□□□□ -0.82
CCDC40-207ENST00000572253 FAAH2Q6GMR7 532 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms