RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 CELSR1Q9NYQ6 3014 aa13.04□□□□□ -0.32
LITAF-208ENST00000571627 TUBAL3A6NHL2 446 aa13.04□□□□□ -0.32
LITAF-208ENST00000571627 CLDN24A6NM45 220 aa13.04□□□□□ -0.32
LITAF-208ENST00000571627 A8MXE2 369 aa13.04□□□□□ -0.32
LITAF-208ENST00000571627 ANGPT2O15123 496 aa13.04□□□□□ -0.32
LITAF-208ENST00000571627 ADAMDEC1O15204 470 aa13.04□□□□□ -0.32
LITAF-208ENST00000571627 NTN1O95631 604 aa13.04□□□□□ -0.32
LITAF-208ENST00000571627 CRHP06850 196 aa13.04□□□□□ -0.32
LITAF-208ENST00000571627 HOXB9P17482 250 aaPredicted RBP13.04□□□□□ -0.32
LITAF-208ENST00000571627 ELK4P28324 431 aa13.04□□□□□ -0.32
LITAF-208ENST00000571627 MVDP53602 400 aa13.04□□□□□ -0.32
LITAF-208ENST00000571627 DSTNP60981 165 aa13.04□□□□□ -0.32
LITAF-208ENST00000571627 PLAURQ03405 335 aa13.04□□□□□ -0.32
LITAF-208ENST00000571627 FADDQ13158 208 aa13.04□□□□□ -0.32
LITAF-208ENST00000571627 CBFBQ13951 182 aa13.04□□□□□ -0.32
LITAF-208ENST00000571627 FGFBP1Q14512 234 aa13.04□□□□□ -0.32
LITAF-208ENST00000571627 GUSBP1Q15486 140 aa13.04□□□□□ -0.32
LITAF-208ENST00000571627 PAGE3Q5JUK9 113 aa13.04□□□□□ -0.32
LITAF-208ENST00000571627 ESPNLQ6ZVH7 1005 aa13.04□□□□□ -0.32
LITAF-208ENST00000571627 EIF3MQ7L2H7 374 aaKnown RBP13.04□□□□□ -0.32
LITAF-208ENST00000571627 KIF18BQ86Y91 864 aa13.04□□□□□ -0.32
LITAF-208ENST00000571627 FAM71CQ8NEG0 241 aa13.04□□□□□ -0.32
LITAF-208ENST00000571627 NRGNQ92686 78 aa13.04□□□□□ -0.32
LITAF-208ENST00000571627 LAT2Q9GZY6 243 aa13.04□□□□□ -0.32
LITAF-208ENST00000571627 SLC38A1Q9H2H9 487 aa13.04□□□□□ -0.32
LITAF-208ENST00000571627 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.04□□□□□ -0.32
LITAF-208ENST00000571627 MCTS1Q9ULC4 181 aaKnown RBP13.04□□□□□ -0.32
LITAF-208ENST00000571627 CORO2BQ9UQ03 480 aa13.04□□□□□ -0.32
LITAF-208ENST00000571627 SLC35A3Q9Y2D2 325 aa13.04□□□□□ -0.32
LITAF-208ENST00000571627 NDUFAF1Q9Y375 327 aa13.04□□□□□ -0.32
LITAF-208ENST00000571627 GPC6Q9Y625 555 aaPredicted RBP13.04□□□□□ -0.32
LITAF-208ENST00000571627 GMEB1Q9Y692 573 aa13.04□□□□□ -0.32
LITAF-208ENST00000571627 ABCA4P78363 2273 aa13.04□□□□□ -0.32
LITAF-208ENST00000571627 MSTNO14793 375 aa13.03□□□□□ -0.32
LITAF-208ENST00000571627 SYNGR4O95473 234 aa13.03□□□□□ -0.32
LITAF-208ENST00000571627 FCGR2AP12318 317 aa13.03□□□□□ -0.32
LITAF-208ENST00000571627 ETFAP13804 333 aa13.03□□□□□ -0.32
LITAF-208ENST00000571627 ADH6P28332 368 aa13.03□□□□□ -0.32
LITAF-208ENST00000571627 ADSLP30566 484 aaPredicted RBP13.03□□□□□ -0.32
LITAF-208ENST00000571627 PGM1P36871 562 aa13.03□□□□□ -0.32
LITAF-208ENST00000571627 PEX19P40855 299 aa13.03□□□□□ -0.32
LITAF-208ENST00000571627 CRISP3P54108 245 aa13.03□□□□□ -0.32
LITAF-208ENST00000571627 SORDQ00796 357 aa13.03□□□□□ -0.32
LITAF-208ENST00000571627 RGNQ15493 299 aa13.03□□□□□ -0.32
LITAF-208ENST00000571627 TMEM176BQ3YBM2 270 aaPredicted RBP13.03□□□□□ -0.32
LITAF-208ENST00000571627 CDH24Q86UP0 819 aa13.03□□□□□ -0.32
LITAF-208ENST00000571627 DPP10Q8N608 796 aa13.03□□□□□ -0.32
LITAF-208ENST00000571627 FAM222BQ8WU58 562 aa13.03□□□□□ -0.32
LITAF-208ENST00000571627 OSTF1Q92882 214 aa13.03□□□□□ -0.32
LITAF-208ENST00000571627 MRGPRX4Q96LA9 322 aa13.03□□□□□ -0.32
LITAF-208ENST00000571627 SRXN1Q9BYN0 137 aa13.03□□□□□ -0.32
LITAF-208ENST00000571627 EVPLLA8MZ36 301 aa13.02□□□□□ -0.33
LITAF-208ENST00000571627 CTAG2O75638 210 aa13.02□□□□□ -0.33
LITAF-208ENST00000571627 PLGP00747 810 aaPredicted RBP13.02□□□□□ -0.33
LITAF-208ENST00000571627 CGAP01215 116 aa13.02□□□□□ -0.33
LITAF-208ENST00000571627 TFPTP0C1Z6 253 aa13.02□□□□□ -0.33
LITAF-208ENST00000571627 BMP2P12643 396 aa13.02□□□□□ -0.33
LITAF-208ENST00000571627 CD1EP15812 388 aa13.02□□□□□ -0.33
LITAF-208ENST00000571627 RYKP34925 604 aa13.02□□□□□ -0.33
LITAF-208ENST00000571627 CARD18P57730 90 aa13.02□□□□□ -0.33
LITAF-208ENST00000571627 SESN3P58005 492 aa13.02□□□□□ -0.33
LITAF-208ENST00000571627 EEF1A1P68104 462 aaKnown RBP13.02□□□□□ -0.33
LITAF-208ENST00000571627 FAM27E3Q08E93 113 aa13.02□□□□□ -0.33
LITAF-208ENST00000571627 MAPRE2Q15555 327 aa13.02□□□□□ -0.33
LITAF-208ENST00000571627 MAPK11Q15759 364 aa13.02□□□□□ -0.33
LITAF-208ENST00000571627 SLC25A53Q5H9E4 307 aa13.02□□□□□ -0.33
LITAF-208ENST00000571627 EEF1A1P5Q5VTE0 462 aa13.02□□□□□ -0.33
LITAF-208ENST00000571627 ZNF474Q6S9Z5 364 aaPredicted RBP13.02□□□□□ -0.33
LITAF-208ENST00000571627 FAM214BQ7L5A3 538 aa13.02□□□□□ -0.33
LITAF-208ENST00000571627 MSRB3Q8IXL7 192 aa13.02□□□□□ -0.33
LITAF-208ENST00000571627 CMIPQ8IY22 773 aa13.02□□□□□ -0.33
LITAF-208ENST00000571627 PEX5LQ8IYB4 626 aa13.02□□□□□ -0.33
LITAF-208ENST00000571627 ZNF610Q8N9Z0 462 aa13.02□□□□□ -0.33
LITAF-208ENST00000571627 ROBO4Q8WZ75 1007 aa13.02□□□□□ -0.33
LITAF-208ENST00000571627 CNOT9Q92600 299 aaKnown RBP13.02□□□□□ -0.33
LITAF-208ENST00000571627 COQ10BQ9H8M1 238 aa13.02□□□□□ -0.33
LITAF-208ENST00000571627 CACYBPQ9HB71 228 aaKnown RBP13.02□□□□□ -0.33
LITAF-208ENST00000571627 DNAJB12Q9NXW2 375 aaKnown RBP13.02□□□□□ -0.33
LITAF-208ENST00000571627 SLC25A37Q9NYZ2 338 aa13.02□□□□□ -0.33
LITAF-208ENST00000571627 SLAMF8Q9P0V8 285 aa13.02□□□□□ -0.33
LITAF-208ENST00000571627 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.02□□□□□ -0.33
LITAF-208ENST00000571627 ITGB1BP2Q9UKP3 347 aa13.02□□□□□ -0.33
LITAF-208ENST00000571627 TRBV5-3A0A0A0MS03 114 aa13.01□□□□□ -0.33
LITAF-208ENST00000571627 A0A0G2JPF8 293 aa13.01□□□□□ -0.33
LITAF-208ENST00000571627 A0A1W2PNR3 127 aa13.01□□□□□ -0.33
LITAF-208ENST00000571627 AGAP5A6NIR3 686 aa13.01□□□□□ -0.33
LITAF-208ENST00000571627 A6NNC1 897 aa13.01□□□□□ -0.33
LITAF-208ENST00000571627 HNRNPCL2B2RXH8 293 aa13.01□□□□□ -0.33
LITAF-208ENST00000571627 HNRNPCL3B7ZW38 293 aa13.01□□□□□ -0.33
LITAF-208ENST00000571627 ETV2O00321 342 aaPredicted RBP13.01□□□□□ -0.33
LITAF-208ENST00000571627 SLC22A2O15244 555 aa13.01□□□□□ -0.33
LITAF-208ENST00000571627 HNRNPCL1O60812 293 aaKnown RBP13.01□□□□□ -0.33
LITAF-208ENST00000571627 DNAJA2O60884 412 aa13.01□□□□□ -0.33
LITAF-208ENST00000571627 ADAM11O75078 769 aa13.01□□□□□ -0.33
LITAF-208ENST00000571627 BCHEP06276 602 aa13.01□□□□□ -0.33
LITAF-208ENST00000571627 DBIP07108 87 aaKnown RBP13.01□□□□□ -0.33
LITAF-208ENST00000571627 HNRNPCL4P0DMR1 293 aa13.01□□□□□ -0.33
LITAF-208ENST00000571627 PGCP20142 388 aa13.01□□□□□ -0.33
LITAF-208ENST00000571627 KCNJ10P78508 379 aa13.01□□□□□ -0.33
LITAF-208ENST00000571627 MERTKQ12866 999 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms