RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 GAS1P54826 345 aa12.48□□□□□ -0.41
RPAIN-209ENST00000571558 NRF1Q16656 503 aa12.48□□□□□ -0.41
RPAIN-209ENST00000571558 MRPL2Q5T653 305 aaKnown RBP12.48□□□□□ -0.41
RPAIN-209ENST00000571558 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.48□□□□□ -0.41
RPAIN-209ENST00000571558 GRAMD2AQ8IUY3 354 aa12.48□□□□□ -0.41
RPAIN-209ENST00000571558 GPALPP1Q8IXQ4 340 aa12.48□□□□□ -0.41
RPAIN-209ENST00000571558 CMIPQ8IY22 773 aa12.48□□□□□ -0.41
RPAIN-209ENST00000571558 OR5M3Q8NGP4 307 aa12.48□□□□□ -0.41
RPAIN-209ENST00000571558 PAQR8Q8TEZ7 354 aa12.48□□□□□ -0.41
RPAIN-209ENST00000571558 PYDC1Q8WXC3 89 aa12.48□□□□□ -0.41
RPAIN-209ENST00000571558 TMCO6Q96DC7 493 aa12.48□□□□□ -0.41
RPAIN-209ENST00000571558 SECISBP2Q96T21 854 aaKnown RBP12.48□□□□□ -0.41
RPAIN-209ENST00000571558 SEPHS2Q99611 448 aa12.48□□□□□ -0.41
RPAIN-209ENST00000571558 ARHGDIGQ99819 225 aa12.48□□□□□ -0.41
RPAIN-209ENST00000571558 UGT2B28Q9BY64 529 aa12.48□□□□□ -0.41
RPAIN-209ENST00000571558 NPDC1Q9NQX5 325 aaPredicted RBP12.48□□□□□ -0.41
RPAIN-209ENST00000571558 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.48□□□□□ -0.41
RPAIN-209ENST00000571558 ARMC1Q9NVT9 282 aa12.48□□□□□ -0.41
RPAIN-209ENST00000571558 DNAJB12Q9NXW2 375 aaKnown RBP12.48□□□□□ -0.41
RPAIN-209ENST00000571558 MGRN1O60291 552 aa12.47□□□□□ -0.41
RPAIN-209ENST00000571558 KRT36O76013 467 aa12.47□□□□□ -0.41
RPAIN-209ENST00000571558 RAP2AP10114 183 aa12.47□□□□□ -0.41
RPAIN-209ENST00000571558 HOXB6P17509 224 aaKnown RBP12.47□□□□□ -0.41
RPAIN-209ENST00000571558 VLDLRP98155 873 aa12.47□□□□□ -0.41
RPAIN-209ENST00000571558 OC90Q02509 493 aaPredicted RBP12.47□□□□□ -0.41
RPAIN-209ENST00000571558 NPTX1Q15818 432 aa12.47□□□□□ -0.41
RPAIN-209ENST00000571558 ZSWIM7Q19AV6 140 aa12.47□□□□□ -0.41
RPAIN-209ENST00000571558 FAM98BQ52LJ0 330 aaKnown RBP12.47□□□□□ -0.41
RPAIN-209ENST00000571558 IFI44LQ53G44 452 aa12.47□□□□□ -0.41
RPAIN-209ENST00000571558 EIPR1Q53HC9 387 aa12.47□□□□□ -0.41
RPAIN-209ENST00000571558 ZFP1Q6P2D0 407 aa12.47□□□□□ -0.41
RPAIN-209ENST00000571558 AAGABQ6PD74 315 aa12.47□□□□□ -0.41
RPAIN-209ENST00000571558 C3P1Q6ZMU1 363 aa12.47□□□□□ -0.41
RPAIN-209ENST00000571558 LACC1Q8IV20 430 aa12.47□□□□□ -0.41
RPAIN-209ENST00000571558 C10orf67Q8IYJ2 551 aa12.47□□□□□ -0.41
RPAIN-209ENST00000571558 TMEM156Q8N614 296 aa12.47□□□□□ -0.41
RPAIN-209ENST00000571558 GEMIN6Q8WXD5 167 aaKnown RBP12.47□□□□□ -0.41
RPAIN-209ENST00000571558 CNOT9Q92600 299 aaKnown RBP12.47□□□□□ -0.41
RPAIN-209ENST00000571558 RND1Q92730 232 aa12.47□□□□□ -0.41
RPAIN-209ENST00000571558 PROX1Q92786 737 aa12.47□□□□□ -0.41
RPAIN-209ENST00000571558 SLC47A1Q96FL8 570 aa12.47□□□□□ -0.41
RPAIN-209ENST00000571558 SGCZQ96LD1 299 aa12.47□□□□□ -0.41
RPAIN-209ENST00000571558 HES7Q9BYE0 225 aa12.47□□□□□ -0.41
RPAIN-209ENST00000571558 TP63Q9H3D4 680 aaPredicted RBP12.47□□□□□ -0.41
RPAIN-209ENST00000571558 S100A14Q9HCY8 104 aa12.47□□□□□ -0.41
RPAIN-209ENST00000571558 IL1RAPQ9NPH3 570 aa12.47□□□□□ -0.41
RPAIN-209ENST00000571558 DLL4Q9NR61 685 aa12.47□□□□□ -0.41
RPAIN-209ENST00000571558 HPF1Q9NWY4 346 aa12.47□□□□□ -0.41
RPAIN-209ENST00000571558 LRFN1Q9P244 771 aa12.47□□□□□ -0.41
RPAIN-209ENST00000571558 CNOT11Q9UKZ1 510 aaKnown RBP12.47□□□□□ -0.41
RPAIN-209ENST00000571558 SH3GLB1Q9Y371 365 aa12.47□□□□□ -0.41
RPAIN-209ENST00000571558 GTF3C1Q12789 2109 aa12.47□□□□□ -0.41
RPAIN-209ENST00000571558 ABCA4P78363 2273 aa12.47□□□□□ -0.41
RPAIN-209ENST00000571558 ZNF469Q96JG9 3925 aaPredicted RBP12.47□□□□□ -0.41
RPAIN-209ENST00000571558 FLNAP21333 2647 aaKnown RBP12.46□□□□□ -0.41
RPAIN-209ENST00000571558 H0YHG0 523 aa12.46□□□□□ -0.41
RPAIN-209ENST00000571558 TP53I11O14683 189 aa12.46□□□□□ -0.41
RPAIN-209ENST00000571558 OIP5O43482 229 aa12.46□□□□□ -0.41
RPAIN-209ENST00000571558 NME2P1O60361 137 aa12.46□□□□□ -0.41
RPAIN-209ENST00000571558 TPST2O60704 377 aa12.46□□□□□ -0.41
RPAIN-209ENST00000571558 ADAM11O75078 769 aa12.46□□□□□ -0.41
RPAIN-209ENST00000571558 FKBP6O75344 327 aa12.46□□□□□ -0.41
RPAIN-209ENST00000571558 CCL3P10147 92 aa12.46□□□□□ -0.41
RPAIN-209ENST00000571558 NME2P22392 152 aa12.46□□□□□ -0.41
RPAIN-209ENST00000571558 CASP3P42574 277 aa12.46□□□□□ -0.41
RPAIN-209ENST00000571558 OR1E2P47887 323 aa12.46□□□□□ -0.41
RPAIN-209ENST00000571558 ZNF136P52737 540 aa12.46□□□□□ -0.41
RPAIN-209ENST00000571558 CHRNB3Q05901 458 aa12.46□□□□□ -0.41
RPAIN-209ENST00000571558 SKP2Q13309 424 aa12.46□□□□□ -0.41
RPAIN-209ENST00000571558 SNTA1Q13424 505 aa12.46□□□□□ -0.41
RPAIN-209ENST00000571558 BICRALQ6AI39 1079 aa12.46□□□□□ -0.41
RPAIN-209ENST00000571558 RTL4Q6ZR62 310 aa12.46□□□□□ -0.41
RPAIN-209ENST00000571558 FKBP9P1Q75LS8 142 aa12.46□□□□□ -0.41
RPAIN-209ENST00000571558 PIWIL3Q7Z3Z3 882 aaKnown RBP12.46□□□□□ -0.41
RPAIN-209ENST00000571558 MDGA2Q7Z553 956 aa12.46□□□□□ -0.41
RPAIN-209ENST00000571558 MARCH3Q86UD3 253 aa12.46□□□□□ -0.41
RPAIN-209ENST00000571558 CARM1Q86X55 608 aa12.46□□□□□ -0.41
RPAIN-209ENST00000571558 RBM45Q8IUH3 476 aaKnown RBP12.46□□□□□ -0.41
RPAIN-209ENST00000571558 CYP4Z2PQ8N1L4 340 aa12.46□□□□□ -0.41
RPAIN-209ENST00000571558 ZNF614Q8N883 585 aa12.46□□□□□ -0.41
RPAIN-209ENST00000571558 SLC35B4Q969S0 331 aa12.46□□□□□ -0.41
RPAIN-209ENST00000571558 ALPK1Q96QP1 1244 aa12.46□□□□□ -0.41
RPAIN-209ENST00000571558 AMBRA1Q9C0C7 1298 aa12.46□□□□□ -0.41
RPAIN-209ENST00000571558 CACYBPQ9HB71 228 aaKnown RBP12.46□□□□□ -0.41
RPAIN-209ENST00000571558 PROK2Q9HC23 129 aa12.46□□□□□ -0.41
RPAIN-209ENST00000571558 ANKRD10Q9NXR5 420 aa12.46□□□□□ -0.41
RPAIN-209ENST00000571558 AURKCQ9UQB9 309 aa12.46□□□□□ -0.41
RPAIN-209ENST00000571558 RNF6Q9Y252 685 aa12.46□□□□□ -0.41
RPAIN-209ENST00000571558 SLC35A3Q9Y2D2 325 aa12.46□□□□□ -0.41
RPAIN-209ENST00000571558 RPH3AQ9Y2J0 694 aaPredicted RBP12.46□□□□□ -0.41
RPAIN-209ENST00000571558 AP4S1Q9Y587 144 aa12.46□□□□□ -0.41
RPAIN-209ENST00000571558 PRRC2AP48634 2157 aaKnown RBP12.46□□□□□ -0.42
RPAIN-209ENST00000571558 ANKRD33BA6NCL7 494 aa12.45□□□□□ -0.42
RPAIN-209ENST00000571558 C17orf51A8MQB3 221 aa12.45□□□□□ -0.42
RPAIN-209ENST00000571558 B4DXG7 233 aa12.45□□□□□ -0.42
RPAIN-209ENST00000571558 M0R3H8 397 aa12.45□□□□□ -0.42
RPAIN-209ENST00000571558 FRS3O43559 492 aa12.45□□□□□ -0.42
RPAIN-209ENST00000571558 SLC25A12O75746 678 aa12.45□□□□□ -0.42
RPAIN-209ENST00000571558 ANGPTL1O95841 491 aa12.45□□□□□ -0.42
RPAIN-209ENST00000571558 CSTAP01040 98 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms