RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 OR5B2Q96R09 309 aa9.06□□□□□ -0.96
CTDNEP1-202ENST00000570380 SLC6A7Q99884 636 aa9.06□□□□□ -0.96
CTDNEP1-202ENST00000570380 TAS2R7Q9NYW3 318 aa9.06□□□□□ -0.96
CTDNEP1-202ENST00000570380 CARD8Q9Y2G2 431 aa9.06□□□□□ -0.96
CTDNEP1-202ENST00000570380 ACTL7BQ9Y614 415 aa9.06□□□□□ -0.96
CTDNEP1-202ENST00000570380 RYR3Q15413 4870 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 ARHGAP32A7KAX9 2087 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 NUP214P35658 2090 aaPredicted RBP9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 LOC105371242A0A075B767 164 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 A0A096LPK6 155 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 IGHV1-18A0A0C4DH31 117 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 RPS17P08708 135 aaKnown RBP9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 IGFBP1P08833 259 aaPredicted RBP9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 PRPS2P11908 318 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 NTSP30990 170 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 DIO1P49895 249 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 P2RX1P51575 399 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 PRPS1P60891 318 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 DR1Q01658 176 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 ACSM2AQ08AH3 577 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 PDK3Q15120 406 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 DUSP5Q16690 384 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 VPS26BQ4G0F5 336 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 SPIN4Q56A73 249 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 SLC25A53Q5H9E4 307 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 CCNJQ5T5M9 372 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 MROH9Q5TGP6 573 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 ACSM2BQ68CK6 577 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 FAHD2BQ6P2I3 314 aaPredicted RBP9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 KLC3Q6P597 504 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 GALNT18Q6P9A2 607 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 VHLLQ6RSH7 139 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 ZNF551Q7Z340 670 aaPredicted RBP9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 CCDC91Q7Z6B0 441 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 CARM1Q86X55 608 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 KLHL7Q8IXQ5 586 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 SLC16A11Q8NCK7 471 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 C1orf162Q8NEQ5 155 aaPredicted RBP9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 CLDND2Q8NHS1 167 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 CDC26Q8NHZ8 85 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 FBXO30Q8TB52 745 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 ZNF483Q8TF39 744 aaPredicted RBP9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 GIMAP5Q96F15 307 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 FAHD2AQ96GK7 314 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 DOK1Q99704 481 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 SUCNR1Q9BXA5 334 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 ACPTQ9BZG2 426 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 EMC3Q9P0I2 261 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 NFU1Q9UMS0 254 aa9.05□□□□□ -0.96
CTDNEP1-202ENST00000570380 KLF11O14901 512 aa9.04□□□□□ -0.96
CTDNEP1-202ENST00000570380 MRPL33O75394 65 aaKnown RBP9.04□□□□□ -0.96
CTDNEP1-202ENST00000570380 ANXA4P09525 319 aaPredicted RBP9.04□□□□□ -0.96
CTDNEP1-202ENST00000570380 IFI6P09912 130 aa9.04□□□□□ -0.96
CTDNEP1-202ENST00000570380 DDX5P17844 614 aaKnown RBP9.04□□□□□ -0.96
CTDNEP1-202ENST00000570380 LCN1P31025 176 aa9.04□□□□□ -0.96
CTDNEP1-202ENST00000570380 PRKAG1P54619 331 aa9.04□□□□□ -0.96
CTDNEP1-202ENST00000570380 SUMO3P55854 103 aaPredicted RBP9.04□□□□□ -0.96
CTDNEP1-202ENST00000570380 BTKQ06187 659 aa9.04□□□□□ -0.96
CTDNEP1-202ENST00000570380 OCLNQ16625 522 aa9.04□□□□□ -0.96
CTDNEP1-202ENST00000570380 NDUFAF6Q330K2 333 aa9.04□□□□□ -0.96
CTDNEP1-202ENST00000570380 FAM71E1Q6IPT2 247 aa9.04□□□□□ -0.96
CTDNEP1-202ENST00000570380 TMPPEQ6ZT21 453 aa9.04□□□□□ -0.96
CTDNEP1-202ENST00000570380 MTERF4Q7Z6M4 381 aaKnown RBP9.04□□□□□ -0.96
CTDNEP1-202ENST00000570380 MTDHQ86UE4 582 aaKnown RBP9.04□□□□□ -0.96
CTDNEP1-202ENST00000570380 GAS2L3Q86XJ1 694 aa9.04□□□□□ -0.96
CTDNEP1-202ENST00000570380 CDRT4Q8N9R6 151 aa9.04□□□□□ -0.96
CTDNEP1-202ENST00000570380 OTUB1Q96FW1 271 aaPredicted RBP9.04□□□□□ -0.96
CTDNEP1-202ENST00000570380 RACGAP1Q9H0H5 632 aa9.04□□□□□ -0.96
CTDNEP1-202ENST00000570380 NARFLQ9H6Q4 476 aa9.04□□□□□ -0.96
CTDNEP1-202ENST00000570380 UNKLQ9H9P5 680 aaKnown RBP9.04□□□□□ -0.96
CTDNEP1-202ENST00000570380 MIEF1Q9NQG6 463 aa9.04□□□□□ -0.96
CTDNEP1-202ENST00000570380 SLC7A10Q9NS82 523 aa9.04□□□□□ -0.96
CTDNEP1-202ENST00000570380 DCTN4Q9UJW0 460 aa9.04□□□□□ -0.96
CTDNEP1-202ENST00000570380 WBP11Q9Y2W2 641 aaKnown RBP9.04□□□□□ -0.96
CTDNEP1-202ENST00000570380 SNX24Q9Y343 169 aa9.04□□□□□ -0.96
CTDNEP1-202ENST00000570380 PTGDR2Q9Y5Y4 395 aa9.04□□□□□ -0.96
CTDNEP1-202ENST00000570380 TMEM129A0AVI4 362 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 SH3PXD2BA1X283 911 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 hCG_2039718K7EN88 272 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 SULT2B1O00204 365 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 ETV2O00321 342 aaPredicted RBP9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 WNT9BO14905 357 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 WNT11O96014 354 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 PNPP00491 289 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 KRT6AP02538 564 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 KRT6BP04259 564 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 ERCC1P07992 297 aaPredicted RBP9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 GSTA2P09210 222 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 GAAP10253 952 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 TYK2P29597 1187 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 CDC25BP30305 580 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 GSTM5P46439 218 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 SERPINB4P48594 390 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 KRT6CP48668 564 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 HTR6P50406 440 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 SLC16A1P53985 500 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 ZNF763Q0D2J5 394 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 HSPB3Q12988 150 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 QPRTQ15274 297 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms