RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 LINC00469Q8N7U9 141 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 CSNK2A3Q8NEV1 391 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 GLYATL2Q8WU03 294 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 SEC11CQ9BY50 192 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 ENKD1Q9H0I2 346 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 NMUR1Q9HB89 426 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 NDUFS4O43181 175 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 HOXA9P31269 272 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 NADSYN1Q6IA69 706 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 CLEC9AQ6UXN8 241 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 ETV3LQ6ZN32 361 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 ZNF620Q6ZNG0 422 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 TAS1R3Q7RTX0 852 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 CPOQ8IVL8 374 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 FAM58AQ8N1B3 248 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 SMIM4Q8WVI0 70 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 SMPDL3BQ92485 455 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 HGDQ93099 445 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 MRGPRX2Q96LB1 330 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 WFIKKN1Q96NZ8 548 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 ZNF426Q9BUY5 554 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 MOB1AQ9H8S9 216 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 IL21RQ9HBE5 538 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 DNAJB11Q9UBS4 358 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 OR5K3A6NET4 321 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 YJEFN3A6XGL0 299 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 LEUTXA8MZ59 168 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 TMEM150CB9EJG8 249 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 TP53I11O14683 189 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 PAPLNO95428 1278 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 CH25HO95992 272 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 CD63P08962 238 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 RPA2P15927 270 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 TACR3P29371 465 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 THBS2P35442 1172 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 ACVR1BP36896 505 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 DVL1P1P54792 670 aaPredicted RBP6.68□□□□□ -1.34
CNOT1-216ENST00000569240 TOMM34Q15785 309 aaPredicted RBP6.68□□□□□ -1.34
CNOT1-216ENST00000569240 OR4K14Q8NGD5 310 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 MYADMQ96S97 322 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 GPR20Q99678 358 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 PDE7BQ9NP56 450 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 FGF20Q9NP95 211 aaPredicted RBP6.68□□□□□ -1.34
CNOT1-216ENST00000569240 TREX1Q9NSU2 369 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 NDRG2Q9UN36 371 aaKnown RBP6.68□□□□□ -1.34
CNOT1-216ENST00000569240 PUS1Q9Y606 427 aaKnown RBP eCLIP6.68□□□□□ -1.34
CNOT1-216ENST00000569240 PIP5K1CO60331 668 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 SLC6A8P48029 635 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 HBA1P69905 142 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 TMEM220Q6QAJ8 160 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 ZNF695Q8IW36 515 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 OR4C5Q8NGB2 326 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 OR13C3Q8NGS6 347 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 OR13D1Q8NGV5 346 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 ZFPM2Q8WW38 1151 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 PTDSS2Q9BVG9 487 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 C1QTNF3Q9BXJ4 246 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 RHBGQ9H310 441 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 SUV39H2Q9H5I1 410 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 TMEM150BA6NC51 233 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 GRIN3BO60391 1043 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 RHOP08100 348 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 PSMB6P28072 239 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 CAV2P51636 162 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 ZNF280AP59817 542 aaPredicted RBP6.68□□□□□ -1.34
CNOT1-216ENST00000569240 NPAS4Q8IUM7 802 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 BVESQ8NE79 360 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 ATOH8Q96SQ7 321 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 LMF2Q9BU23 707 aaKnown RBP6.68□□□□□ -1.34
CNOT1-216ENST00000569240 HRO43593 1189 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 TPST2O60704 377 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 FPR3P25089 353 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 PSMB3P49720 205 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 TAS2R38P59533 333 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 AGBL4Q5VU57 503 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 FAHD1Q6P587 224 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 TMEM81Q6P7N7 255 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 FBXL6Q8N531 539 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 MR1Q95460 341 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 SLC25A19Q9HC21 320 aa6.68□□□□□ -1.34
CNOT1-216ENST00000569240 TIMM13Q9Y5L4 95 aaPredicted RBP6.68□□□□□ -1.34
CNOT1-216ENST00000569240 TRAV1-2A0A0B4J238 106 aa6.67□□□□□ -1.34
CNOT1-216ENST00000569240 LGALS8O00214 317 aa6.67□□□□□ -1.34
CNOT1-216ENST00000569240 LPLP06858 475 aa6.67□□□□□ -1.34
CNOT1-216ENST00000569240 ADRA2CP18825 462 aa6.67□□□□□ -1.34
CNOT1-216ENST00000569240 ERVPABLB-1P60509 514 aa6.67□□□□□ -1.34
CNOT1-216ENST00000569240 SUMO1P63165 101 aaKnown RBP6.67□□□□□ -1.34
CNOT1-216ENST00000569240 PIM3Q86V86 326 aa6.67□□□□□ -1.34
CNOT1-216ENST00000569240 FRMD1Q8N878 549 aa6.67□□□□□ -1.34
CNOT1-216ENST00000569240 NPRL2Q8WTW4 380 aa6.67□□□□□ -1.34
CNOT1-216ENST00000569240 USB1Q9BQ65 265 aaKnown RBP6.67□□□□□ -1.34
CNOT1-216ENST00000569240 TAF9BQ9HBM6 251 aa6.67□□□□□ -1.34
CNOT1-216ENST00000569240 TESQ9UGI8 421 aaKnown RBP6.67□□□□□ -1.34
CNOT1-216ENST00000569240 AIFM1O95831 613 aa6.67□□□□□ -1.34
CNOT1-216ENST00000569240 OR1E2P47887 323 aa6.67□□□□□ -1.34
CNOT1-216ENST00000569240 SOX2P48431 317 aa6.67□□□□□ -1.34
CNOT1-216ENST00000569240 CLINT1Q14677 625 aa6.67□□□□□ -1.34
CNOT1-216ENST00000569240 RPE65Q16518 533 aa6.67□□□□□ -1.34
CNOT1-216ENST00000569240 LEXMQ3ZCV2 418 aa6.67□□□□□ -1.34
CNOT1-216ENST00000569240 CARD16Q5EG05 197 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms