RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 EIF1P41567 113 aaKnown RBP13.04□□□□□ -0.32
USB1-214ENST00000568848 GSTM5P46439 218 aa13.04□□□□□ -0.32
USB1-214ENST00000568848 P2RX1P51575 399 aa13.04□□□□□ -0.32
USB1-214ENST00000568848 LSM11P83369 360 aaKnown RBP eCLIP13.04□□□□□ -0.321e-9■■■■■ 34.8
USB1-214ENST00000568848 TP53BP2Q13625 1128 aa13.04□□□□□ -0.32
USB1-214ENST00000568848 TIGD2Q4W5G0 525 aa13.04□□□□□ -0.32
USB1-214ENST00000568848 RFTN2Q52LD8 501 aaPredicted RBP13.04□□□□□ -0.32
USB1-214ENST00000568848 DCST2Q5T1A1 773 aa13.04□□□□□ -0.32
USB1-214ENST00000568848 LIPMQ5VYY2 423 aa13.04□□□□□ -0.32
USB1-214ENST00000568848 IKBIPQ70UQ0 350 aa13.04□□□□□ -0.32
USB1-214ENST00000568848 OR5AK3PQ8NH89 298 aa13.04□□□□□ -0.32
USB1-214ENST00000568848 CEP70Q8NHQ1 597 aa13.04□□□□□ -0.32
USB1-214ENST00000568848 SORCS2Q96PQ0 1159 aa13.04□□□□□ -0.32
USB1-214ENST00000568848 GRIP2Q9C0E4 1043 aa13.04□□□□□ -0.32
USB1-214ENST00000568848 NTMQ9P121 344 aa13.04□□□□□ -0.32
USB1-214ENST00000568848 KCNE5Q9UJ90 142 aa13.04□□□□□ -0.32
USB1-214ENST00000568848 CIB4A0PJX0 185 aa13.03□□□□□ -0.32
USB1-214ENST00000568848 LRP5LA4QPB2 252 aa13.03□□□□□ -0.32
USB1-214ENST00000568848 GTPBP1O00178 669 aaKnown RBP13.03□□□□□ -0.32
USB1-214ENST00000568848 SLU7O95391 586 aaKnown RBP13.03□□□□□ -0.32
USB1-214ENST00000568848 GSTA1P08263 222 aa13.03□□□□□ -0.32
USB1-214ENST00000568848 ITGA5P08648 1049 aa13.03□□□□□ -0.32
USB1-214ENST00000568848 LINC00032P0C843 101 aa13.03□□□□□ -0.32
USB1-214ENST00000568848 SLC25A16P16260 332 aa13.03□□□□□ -0.32
USB1-214ENST00000568848 FRKP42685 505 aaPredicted RBP13.03□□□□□ -0.32
USB1-214ENST00000568848 DIO1P49895 249 aa13.03□□□□□ -0.32
USB1-214ENST00000568848 RAC3P60763 192 aa13.03□□□□□ -0.32
USB1-214ENST00000568848 SELENBP1Q13228 472 aa13.03□□□□□ -0.32
USB1-214ENST00000568848 PDE7AQ13946 482 aa13.03□□□□□ -0.32
USB1-214ENST00000568848 GALNTL6Q49A17 601 aa13.03□□□□□ -0.32
USB1-214ENST00000568848 PDZK1Q5T2W1 519 aa13.03□□□□□ -0.32
USB1-214ENST00000568848 ZYG11AQ6WRX3 759 aa13.03□□□□□ -0.32
USB1-214ENST00000568848 FRMD7Q6ZUT3 714 aa13.03□□□□□ -0.32
USB1-214ENST00000568848 SLC22A9Q8IVM8 553 aa13.03□□□□□ -0.32
USB1-214ENST00000568848 MISPQ8IVT2 679 aa13.03□□□□□ -0.32
USB1-214ENST00000568848 CCDC103Q8IW40 242 aa13.03□□□□□ -0.32
USB1-214ENST00000568848 WDR31Q8NA23 367 aa13.03□□□□□ -0.32
USB1-214ENST00000568848 ZNF527Q8NB42 609 aa13.03□□□□□ -0.32
USB1-214ENST00000568848 ZFP28Q8NHY6 868 aa13.03□□□□□ -0.32
USB1-214ENST00000568848 MZB1Q8WU39 189 aa13.03□□□□□ -0.32
USB1-214ENST00000568848 FBXO17Q96EF6 278 aa13.03□□□□□ -0.32
USB1-214ENST00000568848 RADILQ96JH8 1075 aa13.03□□□□□ -0.32
USB1-214ENST00000568848 THUMPD3Q9BV44 507 aaKnown RBP13.03□□□□□ -0.32
USB1-214ENST00000568848 SERHL2Q9H4I8 314 aa13.03□□□□□ -0.32
USB1-214ENST00000568848 L2HGDHQ9H9P8 463 aa13.03□□□□□ -0.32
USB1-214ENST00000568848 C1orf109Q9NX04 203 aa13.03□□□□□ -0.32
USB1-214ENST00000568848 PSMC3IPQ9P2W1 217 aaPredicted RBP13.03□□□□□ -0.32
USB1-214ENST00000568848 GPC6Q9Y625 555 aaPredicted RBP13.03□□□□□ -0.32
USB1-214ENST00000568848 GOLGA8QA0A0J9YX86 632 aa13.02□□□□□ -0.33
USB1-214ENST00000568848 GOLGA8OA6NCC3 632 aa13.02□□□□□ -0.33
USB1-214ENST00000568848 TTC36A6NLP5 189 aa13.02□□□□□ -0.33
USB1-214ENST00000568848 GJE1A6NN92 205 aa13.02□□□□□ -0.33
USB1-214ENST00000568848 ZNF716A6NP11 495 aa13.02□□□□□ -0.33
USB1-214ENST00000568848 NPIPB9F8W1W9 429 aa13.02□□□□□ -0.33
USB1-214ENST00000568848 GOLGA8NF8WBI6 632 aa13.02□□□□□ -0.33
USB1-214ENST00000568848 KIAA0513O60268 411 aa13.02□□□□□ -0.33
USB1-214ENST00000568848 SHBGP04278 402 aa13.02□□□□□ -0.33
USB1-214ENST00000568848 DHRS4L1P0CG22 281 aa13.02□□□□□ -0.33
USB1-214ENST00000568848 MYL2P10916 166 aa13.02□□□□□ -0.33
USB1-214ENST00000568848 LAMP1P11279 417 aa13.02□□□□□ -0.33
USB1-214ENST00000568848 CCNA2P20248 432 aa13.02□□□□□ -0.33
USB1-214ENST00000568848 ATP6V1C1P21283 382 aa13.02□□□□□ -0.33
USB1-214ENST00000568848 IL2RGP31785 369 aa13.02□□□□□ -0.33
USB1-214ENST00000568848 SERPINB4P48594 390 aa13.02□□□□□ -0.33
USB1-214ENST00000568848 MST1LQ2TV78 715 aa13.02□□□□□ -0.33
USB1-214ENST00000568848 ABLIM2Q6H8Q1 611 aa13.02□□□□□ -0.33
USB1-214ENST00000568848 TMEM108Q6UXF1 575 aa13.02□□□□□ -0.33
USB1-214ENST00000568848 GALNT5Q7Z7M9 940 aa13.02□□□□□ -0.33
USB1-214ENST00000568848 SLC43A2Q8N370 569 aa13.02□□□□□ -0.33
USB1-214ENST00000568848 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.02□□□□□ -0.33
USB1-214ENST00000568848 UBLCP1Q8WVY7 318 aaPredicted RBP13.02□□□□□ -0.33
USB1-214ENST00000568848 ARL5BQ96KC2 179 aa13.02□□□□□ -0.33
USB1-214ENST00000568848 FCRL1Q96LA6 429 aa13.02□□□□□ -0.33
USB1-214ENST00000568848 FOXN4Q96NZ1 517 aa13.02□□□□□ -0.33
USB1-214ENST00000568848 OR11A1Q9GZK7 315 aa13.02□□□□□ -0.33
USB1-214ENST00000568848 PIGUQ9H490 435 aa13.02□□□□□ -0.33
USB1-214ENST00000568848 RRAGDQ9NQL2 400 aaPredicted RBP13.02□□□□□ -0.33
USB1-214ENST00000568848 GPATCH2Q9NW75 528 aa13.02□□□□□ -0.33
USB1-214ENST00000568848 TMEM160Q9NX00 188 aa13.02□□□□□ -0.33
USB1-214ENST00000568848 LPAR3Q9UBY5 353 aa13.02□□□□□ -0.33
USB1-214ENST00000568848 KCNS2Q9ULS6 477 aa13.02□□□□□ -0.33
USB1-214ENST00000568848 CCDC151A5D8V7 595 aa13.01□□□□□ -0.33
USB1-214ENST00000568848 SMIM23A6NLE4 172 aa13.01□□□□□ -0.33
USB1-214ENST00000568848 VWC2LB2RUY7 222 aa13.01□□□□□ -0.33
USB1-214ENST00000568848 H7C417 338 aa13.01□□□□□ -0.33
USB1-214ENST00000568848 SKAP2O75563 359 aaPredicted RBP13.01□□□□□ -0.33
USB1-214ENST00000568848 RGS9O75916 674 aaPredicted RBP13.01□□□□□ -0.33
USB1-214ENST00000568848 C6orf47O95873 294 aa13.01□□□□□ -0.33
USB1-214ENST00000568848 C1QCP02747 245 aa13.01□□□□□ -0.33
USB1-214ENST00000568848 PROCP04070 461 aa13.01□□□□□ -0.33
USB1-214ENST00000568848 ITGA2P17301 1181 aa13.01□□□□□ -0.33
USB1-214ENST00000568848 EFNA4P52798 201 aa13.01□□□□□ -0.33
USB1-214ENST00000568848 SESN3P58005 492 aa13.01□□□□□ -0.33
USB1-214ENST00000568848 DSCR9P59020 149 aa13.01□□□□□ -0.33
USB1-214ENST00000568848 RUNX1T1Q06455 604 aa13.01□□□□□ -0.33
USB1-214ENST00000568848 MERTKQ12866 999 aa13.01□□□□□ -0.33
USB1-214ENST00000568848 SKP2Q13309 424 aa13.01□□□□□ -0.33
USB1-214ENST00000568848 GPR68Q15743 365 aa13.01□□□□□ -0.33
USB1-214ENST00000568848 GABRA6Q16445 453 aa13.01□□□□□ -0.33
USB1-214ENST00000568848 FBXW9Q5XUX1 488 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms