RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 DUSP7Q16829 419 aa10.4□□□□□ -0.74
KARS-207ENST00000566560 C4orf17Q53FE4 359 aa10.4□□□□□ -0.74
KARS-207ENST00000566560 WIPI1Q5MNZ9 446 aaPredicted RBP10.4□□□□□ -0.74
KARS-207ENST00000566560 LCN8Q6JVE9 175 aa10.4□□□□□ -0.74
KARS-207ENST00000566560 CYP2R1Q6VVX0 501 aa10.4□□□□□ -0.74
KARS-207ENST00000566560 RANBP3LQ86VV4 465 aaPredicted RBP10.4□□□□□ -0.74
KARS-207ENST00000566560 ZNF843Q8N446 348 aa10.4□□□□□ -0.74
KARS-207ENST00000566560 OR10Q1Q8NGQ4 319 aa10.4□□□□□ -0.74
KARS-207ENST00000566560 VANGL1Q8TAA9 524 aaPredicted RBP10.4□□□□□ -0.74
KARS-207ENST00000566560 GPR119Q8TDV5 335 aa10.4□□□□□ -0.74
KARS-207ENST00000566560 ZBTB8AQ96BR9 441 aa10.4□□□□□ -0.74
KARS-207ENST00000566560 HSH2DQ96JZ2 352 aa10.4□□□□□ -0.74
KARS-207ENST00000566560 SFXN2Q96NB2 322 aa10.4□□□□□ -0.74
KARS-207ENST00000566560 ARHGDIGQ99819 225 aa10.4□□□□□ -0.74
KARS-207ENST00000566560 TRIM15Q9C019 465 aa10.4□□□□□ -0.74
KARS-207ENST00000566560 EVA1AQ9H8M9 152 aa10.4□□□□□ -0.74
KARS-207ENST00000566560 GORASP2Q9H8Y8 452 aa10.4□□□□□ -0.74
KARS-207ENST00000566560 ACKR4Q9NPB9 350 aa10.4□□□□□ -0.74
KARS-207ENST00000566560 ACTR3BQ9P1U1 418 aa10.4□□□□□ -0.74
KARS-207ENST00000566560 TESQ9UGI8 421 aaKnown RBP10.4□□□□□ -0.74
KARS-207ENST00000566560 SAMD4AQ9UPU9 718 aaKnown RBP10.4□□□□□ -0.74
KARS-207ENST00000566560 SLC9A8Q9Y2E8 581 aa10.4□□□□□ -0.74
KARS-207ENST00000566560 V9GYQ6 96 aa10.4□□□□□ -0.74
KARS-207ENST00000566560 ZGRF1Q86YA3 2104 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 TRGV5A0A0B4J1U4 118 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 C7orf72A4D263 438 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 SHISA8B8ZZ34 492 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 B8ZZF3 427 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 FAAHO00519 579 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 HCN1O60741 890 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 LGI1O95970 557 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 IGHG3P01860 377 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 PRG2P13727 222 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 PRKCAP17252 672 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 TNFRSF1BP20333 461 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 COPZ1P61923 177 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 SELENOWP63302 87 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 HOXC5Q00444 222 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 HSF1Q00613 529 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 FLOT2Q14254 428 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 OCLNQ16625 522 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 ZSCAN26Q16670 478 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 PGM2L1Q6PCE3 622 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 CBLL1Q75N03 491 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 TRILQ7L0X0 811 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 ASRGL1Q7L266 308 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 YTHDF3Q7Z739 585 aaKnown RBP10.39□□□□□ -0.75
KARS-207ENST00000566560 VTCN1Q7Z7D3 282 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 CARM1Q86X55 608 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 DHFR2Q86XF0 187 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 EID3Q8N140 333 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 GHDCQ8N2G8 530 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 CADM2Q8N3J6 435 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 OR5M1Q8NGP8 315 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 NEIL3Q8TAT5 605 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 GEMIN6Q8WXD5 167 aaKnown RBP10.39□□□□□ -0.75
KARS-207ENST00000566560 TMEM234Q8WY98 164 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 ST8SIA1Q92185 356 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 LRGUKQ96M69 825 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 BARD1Q99728 777 aaKnown RBP10.39□□□□□ -0.75
KARS-207ENST00000566560 PIGQQ9BRB3 760 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 MMADHCQ9H3L0 296 aaPredicted RBP10.39□□□□□ -0.75
KARS-207ENST00000566560 DCAF13Q9NV06 445 aaKnown RBP10.39□□□□□ -0.75
KARS-207ENST00000566560 SLC7A8Q9UHI5 535 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 SLC6A5Q9Y345 797 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 SH3GLB1Q9Y371 365 aa10.39□□□□□ -0.75
KARS-207ENST00000566560 MRPS18CQ9Y3D5 142 aaKnown RBP10.39□□□□□ -0.75
KARS-207ENST00000566560 SPENQ96T58 3664 aaKnown RBP10.38□□□□□ -0.75
KARS-207ENST00000566560 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.38□□□□□ -0.75
KARS-207ENST00000566560 OR2M5A3KFT3 312 aa10.38□□□□□ -0.75
KARS-207ENST00000566560 AQP7O14520 342 aa10.38□□□□□ -0.75
KARS-207ENST00000566560 ZIC3O60481 467 aa10.38□□□□□ -0.75
KARS-207ENST00000566560 GP1BBP13224 206 aa10.38□□□□□ -0.75
KARS-207ENST00000566560 EDN3P14138 238 aa10.38□□□□□ -0.75
KARS-207ENST00000566560 HTR2AP28223 471 aa10.38□□□□□ -0.75
KARS-207ENST00000566560 ELK4P28324 431 aa10.38□□□□□ -0.75
KARS-207ENST00000566560 EIF1P41567 113 aaKnown RBP10.38□□□□□ -0.75
KARS-207ENST00000566560 ACAA2P42765 397 aaKnown RBP10.38□□□□□ -0.75
KARS-207ENST00000566560 IDH2P48735 452 aaKnown RBP10.38□□□□□ -0.75
KARS-207ENST00000566560 ZNF136P52737 540 aa10.38□□□□□ -0.75
KARS-207ENST00000566560 SESN3P58005 492 aa10.38□□□□□ -0.75
KARS-207ENST00000566560 MS4A2Q01362 244 aa10.38□□□□□ -0.75
KARS-207ENST00000566560 TLE1Q04724 770 aa10.38□□□□□ -0.75
KARS-207ENST00000566560 TRAP1Q12931 704 aaKnown RBP10.38□□□□□ -0.75
KARS-207ENST00000566560 NPTX1Q15818 432 aa10.38□□□□□ -0.75
KARS-207ENST00000566560 GLYR1Q49A26 553 aaPredicted RBP10.38□□□□□ -0.75
KARS-207ENST00000566560 IFI44LQ53G44 452 aa10.38□□□□□ -0.75
KARS-207ENST00000566560 KRTCAP3Q53RY4 240 aa10.38□□□□□ -0.75
KARS-207ENST00000566560 MTX3Q5HYI7 312 aa10.38□□□□□ -0.75
KARS-207ENST00000566560 ARHGAP11AQ6P4F7 1023 aa10.38□□□□□ -0.75
KARS-207ENST00000566560 AAGABQ6PD74 315 aa10.38□□□□□ -0.75
KARS-207ENST00000566560 ENPP6Q6UWR7 440 aa10.38□□□□□ -0.75
KARS-207ENST00000566560 GFRALQ6UXV0 394 aa10.38□□□□□ -0.75
KARS-207ENST00000566560 DEF8Q6ZN54 512 aa10.38□□□□□ -0.75
KARS-207ENST00000566560 FKBP9P1Q75LS8 142 aa10.38□□□□□ -0.75
KARS-207ENST00000566560 GRINAQ7Z429 371 aa10.38□□□□□ -0.75
KARS-207ENST00000566560 LACC1Q8IV20 430 aa10.38□□□□□ -0.75
KARS-207ENST00000566560 GTPBP8Q8N3Z3 284 aaPredicted RBP10.38□□□□□ -0.75
KARS-207ENST00000566560 FAM86B1Q8N7N1 296 aa10.38□□□□□ -0.75
KARS-207ENST00000566560 OR52E4Q8NGH9 312 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms