RNA–Protein interactions for RNA: ENST00000566452.1

BBS2-215, Transcript of Bardet-Biedl syndrome 2, human

TSL 2

Gene BBS2, Length 299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS2-215	ENST00000566452	HEATR9	A2RTY3	570 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	LOC730098	B7Z3J9	87 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	NPIPA7	E9PJI5	369 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	WRB	O00258	174 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	TNFSF12	O43508	249 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	TIMM8A	O60220	97 aa	Predicted RBP	3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	STX11	O75558	287 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	TRMU	O75648	421 aa	Known RBP	3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	CEACAM4	O75871	244 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	SORBS2	O94875	1100 aa	Known RBP	3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	IGSF6	O95976	241 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	NGFR	P08138	427 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	ALPI	P09923	528 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	NPIPA8	P0DM63	369 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	TROVE2	P10155	538 aa	Known RBP eCLIP	3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	POU2F1	P14859	743 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	TPSB2	P20231	275 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	PCMT1	P22061	227 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	EDNRA	P25101	427 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	FCGR2C	P31995	323 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	TSFM	P43897	325 aa	Known RBP	3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	LEPR	P48357	1165 aa	Known RBP	3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	EMD	P50402	254 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	CRYBA2	P53672	197 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	RAG2	P55895	527 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	EIF2B1	Q14232	305 aa	Known RBP	3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	ANGPT1	Q15389	498 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	TPSAB1	Q15661	275 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	CHI3L2	Q15782	390 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	TMEM44	Q2T9K0	475 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	BCL7A	Q4VC05	210 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	SPANXN2	Q5MJ10	180 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	LCE1A	Q5T7P2	110 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	SCYL2	Q6P3W7	929 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	KDM7A	Q6ZMT4	941 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	TSEN54	Q7Z6J9	526 aa	Known RBP	3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	RBM23	Q86U06	439 aa	Known RBP	3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	PSTK	Q8IV42	348 aa	Known RBP	3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	GPR137C	Q8N3F9	429 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	ARL14	Q8N4G2	192 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	RAB42	Q8N4Z0	105 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	TMEM178A	Q8NBL3	297 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	POC1A	Q8NBT0	407 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	OR52K1	Q8NGK4	314 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	SDSL	Q96GA7	329 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	ZNF479	Q96JC4	524 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	FAM218A	Q96MZ4	157 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	CCNL2	Q96S94	520 aa	Predicted RBP	3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	FUCA2	Q9BTY2	467 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	RPP25	Q9BUL9	199 aa	Known RBP	3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	GPR174	Q9BXC1	333 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	KRTAP1-5	Q9BYS1	174 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	HOXD1	Q9GZZ0	328 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	COMMD4	Q9H0A8	199 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	CLSTN2	Q9H4D0	955 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	PLEKHA3	Q9HB20	300 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	MRPL39	Q9NYK5	338 aa	Known RBP	3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	CIDEB	Q9UHD4	219 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	ADAM28	Q9UKQ2	775 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	NPIPA1	Q9UND3	350 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	EXOSC1	Q9Y3B2	195 aa	Known RBP	3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	DENND4A	Q7Z401	1863 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	DNAH14	Q0VDD8	3507 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	STK36	Q9NRP7	1315 aa		3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	MTCL1	Q9Y4B5	1905 aa	Known RBP	3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	CNOT1	A5YKK6	2376 aa	Known RBP	3.15	□□□□□ -1.91
BBS2-215	ENST00000566452	PDCD11	Q14690	1871 aa	Known RBP	3.14	□□□□□ -1.91
BBS2-215	ENST00000566452	SDK1	Q7Z5N4	2213 aa		3.14	□□□□□ -1.91
BBS2-215	ENST00000566452	IGHV4-4	A0A075B6R2	117 aa		3.14	□□□□□ -1.91
BBS2-215	ENST00000566452		A0A1W2PR80	420 aa		3.14	□□□□□ -1.91
BBS2-215	ENST00000566452	LACTBL1	A8MY62	500 aa		3.14	□□□□□ -1.91
BBS2-215	ENST00000566452	TCP11X1	B4DZS4	312 aa		3.14	□□□□□ -1.91
BBS2-215	ENST00000566452	NEDD8-MDP1	E9PL57	170 aa		3.14	□□□□□ -1.91
BBS2-215	ENST00000566452	PDLIM1	O00151	329 aa		3.14	□□□□□ -1.91
BBS2-215	ENST00000566452	CASK	O14936	926 aa		3.14	□□□□□ -1.91
BBS2-215	ENST00000566452	NBR2	O15453	112 aa		3.14	□□□□□ -1.91
BBS2-215	ENST00000566452	PI15	O43692	258 aa		3.14	□□□□□ -1.91
BBS2-215	ENST00000566452	RANBP6	O60518	1105 aa	Known RBP	3.14	□□□□□ -1.91
BBS2-215	ENST00000566452	KHDRBS3	O75525	346 aa	Known RBP	3.14	□□□□□ -1.91
BBS2-215	ENST00000566452	CTAG2	O75638	210 aa		3.14	□□□□□ -1.91
BBS2-215	ENST00000566452	AP2A2	O94973	939 aa		3.14	□□□□□ -1.91
BBS2-215	ENST00000566452	H2BFM	P0C1H6	154 aa		3.14	□□□□□ -1.91
BBS2-215	ENST00000566452	FGF3	P11487	239 aa	Predicted RBP	3.14	□□□□□ -1.91
BBS2-215	ENST00000566452	BCKDHA	P12694	445 aa		3.14	□□□□□ -1.91
BBS2-215	ENST00000566452	PGC	P20142	388 aa		3.14	□□□□□ -1.91
BBS2-215	ENST00000566452	CALML3	P27482	149 aa		3.14	□□□□□ -1.91
BBS2-215	ENST00000566452	ID1	P41134	155 aa		3.14	□□□□□ -1.91
BBS2-215	ENST00000566452	SLC1A4	P43007	532 aa		3.14	□□□□□ -1.91
BBS2-215	ENST00000566452	MAGEA5	P43359	124 aa		3.14	□□□□□ -1.91
BBS2-215	ENST00000566452	MAGEA8	P43361	318 aa		3.14	□□□□□ -1.91
BBS2-215	ENST00000566452	SYK	P43405	635 aa		3.14	□□□□□ -1.91
BBS2-215	ENST00000566452	AP3M2	P53677	418 aa		3.14	□□□□□ -1.91
BBS2-215	ENST00000566452	PAX9	P55771	341 aa		3.14	□□□□□ -1.91
BBS2-215	ENST00000566452	NTHL1	P78549	312 aa		3.14	□□□□□ -1.91
BBS2-215	ENST00000566452	EWSR1	Q01844	656 aa	Known RBP eCLIP	3.14	□□□□□ -1.91
BBS2-215	ENST00000566452	TGM3	Q08188	693 aa		3.14	□□□□□ -1.91
BBS2-215	ENST00000566452	SNAI3	Q3KNW1	292 aa		3.14	□□□□□ -1.91
BBS2-215	ENST00000566452	AGAP7P	Q5VUJ5	663 aa		3.14	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms