RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 VRK2Q86Y07 508 aa12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 PTOV1Q86YD1 416 aa12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 CMIPQ8IY22 773 aa12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 ACBD4Q8NC06 268 aa12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 BBS10Q8TAM1 723 aa12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 SMPDL3BQ92485 455 aa12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 CNOT9Q92600 299 aaKnown RBP12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 RCN3Q96D15 328 aa12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 RNF145Q96MT1 663 aa12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 SLC39A3Q9BRY0 314 aa12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 KAT8Q9H7Z6 458 aaKnown RBP12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 NANOGQ9H9S0 305 aa12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 EXOSC3Q9NQT5 275 aaKnown RBP12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 DNAJB12Q9NXW2 375 aaKnown RBP12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 GPC6Q9Y625 555 aaPredicted RBP12.45□□□□□ -0.42
HERPUD1-210ENST00000565966 C5orf58C9J3I9 102 aa12.44□□□□□ -0.42
HERPUD1-210ENST00000565966 H0YC42 278 aa12.44□□□□□ -0.42
HERPUD1-210ENST00000565966 ETV2O00321 342 aaPredicted RBP12.44□□□□□ -0.42
HERPUD1-210ENST00000565966 TGM6O95932 706 aa12.44□□□□□ -0.42
HERPUD1-210ENST00000565966 PRKCAP17252 672 aa12.44□□□□□ -0.42
HERPUD1-210ENST00000565966 GZMMP51124 257 aa12.44□□□□□ -0.42
HERPUD1-210ENST00000565966 TPD52P55327 224 aaPredicted RBP12.44□□□□□ -0.42
HERPUD1-210ENST00000565966 EEF1A1P68104 462 aaKnown RBP12.44□□□□□ -0.42
HERPUD1-210ENST00000565966 SCARB2Q14108 478 aa12.44□□□□□ -0.42
HERPUD1-210ENST00000565966 QPRTQ15274 297 aa12.44□□□□□ -0.42
HERPUD1-210ENST00000565966 SGCBQ16585 318 aa12.44□□□□□ -0.42
HERPUD1-210ENST00000565966 LIN52Q52LA3 116 aa12.44□□□□□ -0.42
HERPUD1-210ENST00000565966 SLC25A53Q5H9E4 307 aa12.44□□□□□ -0.42
HERPUD1-210ENST00000565966 RABL3Q5HYI8 236 aa12.44□□□□□ -0.42
HERPUD1-210ENST00000565966 EEF1A1P5Q5VTE0 462 aa12.44□□□□□ -0.42
HERPUD1-210ENST00000565966 REEP3Q6NUK4 255 aa12.44□□□□□ -0.42
HERPUD1-210ENST00000565966 PLXDC2Q6UX71 529 aa12.44□□□□□ -0.42
HERPUD1-210ENST00000565966 NET1Q7Z628 596 aaPredicted RBP12.44□□□□□ -0.42
HERPUD1-210ENST00000565966 GGNQ86UU5 652 aa12.44□□□□□ -0.42
HERPUD1-210ENST00000565966 PCYOX1LQ8NBM8 494 aa12.44□□□□□ -0.42
HERPUD1-210ENST00000565966 RELL2Q8NC24 303 aaPredicted RBP12.44□□□□□ -0.42
HERPUD1-210ENST00000565966 FBXO27Q8NI29 283 aa12.44□□□□□ -0.42
HERPUD1-210ENST00000565966 LRRC46Q96FV0 321 aa12.44□□□□□ -0.42
HERPUD1-210ENST00000565966 CCT8L2Q96SF2 557 aa12.44□□□□□ -0.42
HERPUD1-210ENST00000565966 PINK1Q9BXM7 581 aa12.44□□□□□ -0.42
HERPUD1-210ENST00000565966 NPDC1Q9NQX5 325 aaPredicted RBP12.44□□□□□ -0.42
HERPUD1-210ENST00000565966 GID8Q9NWU2 228 aa12.44□□□□□ -0.42
HERPUD1-210ENST00000565966 PAQR5Q9NXK6 330 aaPredicted RBP12.44□□□□□ -0.42
HERPUD1-210ENST00000565966 ZNF443Q9Y2A4 671 aaPredicted RBP12.44□□□□□ -0.42
HERPUD1-210ENST00000565966 ARL2BPQ9Y2Y0 163 aa12.44□□□□□ -0.42
HERPUD1-210ENST00000565966 NOTCH2Q04721 2471 aa12.44□□□□□ -0.42
HERPUD1-210ENST00000565966 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 SLC22A20A6NK97 555 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 SYT5O00445 386 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 EIF1AYO14602 144 aaKnown RBP12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 EFNA2O43921 213 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 SHOX2O60902 331 aaPredicted RBP12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 ADAM11O75078 769 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 NTN1O95631 604 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 THBS1P07996 1170 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 PABPC4LP0CB38 370 aaKnown RBP12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 IGFBP2P18065 325 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 PGCP20142 388 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 IL11P20809 199 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 ME2P23368 584 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 SLC6A2P23975 617 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 ELK4P28324 431 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 ASCL1P50553 236 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 AGFG1P52594 562 aaKnown RBP12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 RBBP4Q09028 425 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 PDSS1Q5T2R2 415 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 RNF220Q5VTB9 566 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 OR2A2Q6IF42 318 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 MEX3BQ6ZN04 569 aaKnown RBP12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 ZNF836Q6ZNA1 936 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 ESPNLQ6ZVH7 1005 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 ZZZ3Q8IYH5 903 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 LILRA2Q8N149 483 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 CLIP4Q8N3C7 705 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 HIPK4Q8NE63 616 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 OR8J3Q8NGG0 315 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 OR10A6Q8NH74 314 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 INTS12Q96CB8 462 aaKnown RBP12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 ZNF845Q96IR2 970 aaPredicted RBP12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 MRGPRX4Q96LA9 322 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 SFXN3Q9BWM7 321 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 RSPO3Q9BXY4 272 aaPredicted RBP12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 RLIMQ9NVW2 624 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 ADAM21Q9UKJ8 722 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 ZNF232Q9UNY5 417 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 IFT52Q9Y366 437 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 ZNF175Q9Y473 711 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 CHST2Q9Y4C5 530 aa12.43□□□□□ -0.42
HERPUD1-210ENST00000565966 CDHR4A6H8M9 788 aa12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 AIM2O14862 343 aa12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 ADAMDEC1O15204 470 aa12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 OPN1LWP04000 364 aa12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 CRHP06850 196 aa12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 ETS2P15036 469 aa12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 RYKP34925 604 aa12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 EIF1AXP47813 144 aaKnown RBP12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 SLC6A8P48029 635 aa12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 DLX5P56178 289 aa12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 SESN3P58005 492 aa12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 EPS8Q12929 822 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms