RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 MAPK14Q16539 360 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 FAM174BQ3ZCQ3 159 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 SLC25A53Q5H9E4 307 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 SPANXN4Q5MJ08 99 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 PRSS57Q6UWY2 283 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 TMPPEQ6ZT21 453 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 BHLHA15Q7RTS1 189 aaPredicted RBP5.7□□□□□ -1.5
TCF4-228ENST00000565393 SPATA19Q7Z5L4 167 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 HMGN2P46Q86SG4 172 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 CROCCP2Q86T23 111 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 MTDHQ86UE4 582 aaKnown RBP5.7□□□□□ -1.5
TCF4-228ENST00000565393 CIARTQ8N365 385 aaPredicted RBP5.7□□□□□ -1.5
TCF4-228ENST00000565393 MREGQ8N565 214 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 ARFGAP2Q8N6H7 521 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 TRIML2Q8N7C3 387 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 ZNF611Q8N823 705 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 RAB3IL1Q8TBN0 382 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 MGARPQ8TDB4 240 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 ST8SIA1Q92185 356 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 GTPBP3Q969Y2 492 aaKnown RBP5.7□□□□□ -1.5
TCF4-228ENST00000565393 TESCQ96BS2 214 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 ROPN1LQ96C74 230 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 MUCL1Q96DR8 90 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 ZHX1-C8orf76Q96EF9 292 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 TRMT61AQ96FX7 289 aaKnown RBP5.7□□□□□ -1.5
TCF4-228ENST00000565393 MARK4Q96L34 752 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 OR52E6Q96RD3 313 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 ZBTB18Q99592 522 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 USB1Q9BQ65 265 aaKnown RBP5.7□□□□□ -1.5
TCF4-228ENST00000565393 SLC35A5Q9BS91 424 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 OR10A4Q9H209 315 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 SERHL2Q9H4I8 314 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 MTHFD2LQ9H903 347 aaPredicted RBP5.7□□□□□ -1.5
TCF4-228ENST00000565393 GP6Q9HCN6 339 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 SSU72Q9NP77 194 aaKnown RBP5.7□□□□□ -1.5
TCF4-228ENST00000565393 CTPS2Q9NRF8 586 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 POLE3Q9NRF9 147 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 ACER3Q9NUN7 267 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 PRSS50Q9UI38 385 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 LAMP3Q9UQV4 416 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 SLC35A3Q9Y2D2 325 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 SPIN1Q9Y657 262 aaPredicted RBP5.7□□□□□ -1.5
TCF4-228ENST00000565393 PDZD2O15018 2839 aa5.7□□□□□ -1.5
TCF4-228ENST00000565393 CELSR2Q9HCU4 2923 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 PHF3Q92576 2039 aaKnown RBP5.69□□□□□ -1.5
TCF4-228ENST00000565393 CENPVL1A0A0U1RR11 272 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 CIB4A0PJX0 185 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 CLDN24A6NM45 220 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 ZNF724A8MTY0 619 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 ZNF814B7Z6K7 855 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 ANKRD28O15084 1053 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 SMAD9O15198 467 aaKnown RBP5.69□□□□□ -1.5
TCF4-228ENST00000565393 CYTIPO60759 359 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 SCN2BO60939 215 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 MRPL33O75394 65 aaKnown RBP5.69□□□□□ -1.5
TCF4-228ENST00000565393 GCM2O75603 506 aaPredicted RBP5.69□□□□□ -1.5
TCF4-228ENST00000565393 LYZL6O75951 148 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 H6PDO95479 791 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 IGHV3-9P01782 118 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 NR2F1P10589 423 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 IL7RP16871 459 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 FKBP2P26885 142 aaKnown RBP5.69□□□□□ -1.5
TCF4-228ENST00000565393 LOXP28300 417 aaPredicted RBP5.69□□□□□ -1.5
TCF4-228ENST00000565393 EPHA3P29320 983 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 PGM1P36871 562 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 MAGEA8P43361 318 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 OR3A2P47893 321 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 PTH2RP49190 550 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 KHKP50053 298 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 ANXA11P50995 505 aaKnown RBP5.69□□□□□ -1.5
TCF4-228ENST00000565393 RPS4XP62701 263 aaKnown RBP5.69□□□□□ -1.5
TCF4-228ENST00000565393 BST1Q10588 318 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 FAPQ12884 760 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 SKP2Q13309 424 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 GNA13Q14344 377 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 CASP8Q14790 479 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 DPY19L1Q2PZI1 675 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 KRTAP21-3Q3LHN1 58 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 GLIPR1L2Q4G1C9 344 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 NCMAPQ5T1S8 102 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 SAXO2Q658L1 398 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 TYW3Q6IPR3 259 aaKnown RBP5.69□□□□□ -1.5
TCF4-228ENST00000565393 HEPHL1Q6MZM0 1159 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 C3orf33Q6P1S2 294 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 TFAP2EQ6VUC0 442 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 Q6ZT83 130 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.69□□□□□ -1.5
TCF4-228ENST00000565393 GALNT5Q7Z7M9 940 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 RNF130Q86XS8 419 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 ADGRG3Q86Y34 549 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 KRTAP1-3Q8IUG1 177 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 GABRG1Q8N1C3 465 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 ANKFN1Q8N957 763 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 PIWIL2Q8TC59 973 aaKnown RBP5.69□□□□□ -1.5
TCF4-228ENST00000565393 PNPT1Q8TCS8 783 aaKnown RBP5.69□□□□□ -1.5
TCF4-228ENST00000565393 MIPOL1Q8TD10 442 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 SMAP2Q8WU79 429 aaPredicted RBP5.69□□□□□ -1.5
TCF4-228ENST00000565393 ZNF75CPQ92670 426 aaPredicted RBP5.69□□□□□ -1.5
TCF4-228ENST00000565393 NEURL3Q96EH8 262 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 TEX37Q96LM6 180 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms