RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 ARFRP1Q13795 201 aa2.59□□□□□ -1.99
PALB2-203ENST00000565038 EBI3Q14213 229 aa2.59□□□□□ -1.99
PALB2-203ENST00000565038 C16orf62Q7Z3J2 963 aa2.59□□□□□ -1.99
PALB2-203ENST00000565038 FAM71E2Q8N5Q1 922 aa2.59□□□□□ -1.99
PALB2-203ENST00000565038 C15orf54Q8N8G6 183 aa2.59□□□□□ -1.99
PALB2-203ENST00000565038 Q8N9W7 124 aa2.59□□□□□ -1.99
PALB2-203ENST00000565038 CNNM3Q8NE01 707 aa2.59□□□□□ -1.99
PALB2-203ENST00000565038 RAB7BQ96AH8 199 aa2.59□□□□□ -1.99
PALB2-203ENST00000565038 STARD4Q96DR4 205 aa2.59□□□□□ -1.99
PALB2-203ENST00000565038 PGLYRP4Q96LB8 373 aa2.59□□□□□ -1.99
PALB2-203ENST00000565038 SLC6A7Q99884 636 aa2.59□□□□□ -1.99
PALB2-203ENST00000565038 KLHDC3Q9BQ90 382 aa2.59□□□□□ -1.99
PALB2-203ENST00000565038 C1orf21Q9H246 121 aa2.59□□□□□ -1.99
PALB2-203ENST00000565038 AIG1Q9NVV5 245 aa2.59□□□□□ -1.99
PALB2-203ENST00000565038 WARS2Q9UGM6 360 aaKnown RBP2.59□□□□□ -1.99
PALB2-203ENST00000565038 ZNF225Q9UK10 706 aa2.59□□□□□ -1.99
PALB2-203ENST00000565038 NOTCH2Q04721 2471 aa2.59□□□□□ -2
PALB2-203ENST00000565038 A0A1B0GUL7 405 aa2.58□□□□□ -2
PALB2-203ENST00000565038 VSTM2BA6NLU5 285 aa2.58□□□□□ -2
PALB2-203ENST00000565038 GJE1A6NN92 205 aa2.58□□□□□ -2
PALB2-203ENST00000565038 FAM166BA8MTA8 275 aa2.58□□□□□ -2
PALB2-203ENST00000565038 CHADO15335 359 aa2.58□□□□□ -2
PALB2-203ENST00000565038 PRPSAP2O60256 369 aa2.58□□□□□ -2
PALB2-203ENST00000565038 ECI2O75521 394 aa2.58□□□□□ -2
PALB2-203ENST00000565038 LALBAP00709 142 aa2.58□□□□□ -2
PALB2-203ENST00000565038 CA1P00915 261 aaPredicted RBP2.58□□□□□ -2
PALB2-203ENST00000565038 CYP2F1P24903 491 aa2.58□□□□□ -2
PALB2-203ENST00000565038 CCND2P30279 289 aa2.58□□□□□ -2
PALB2-203ENST00000565038 CD80P33681 288 aa2.58□□□□□ -2
PALB2-203ENST00000565038 PLK1P53350 603 aa2.58□□□□□ -2
PALB2-203ENST00000565038 BIDP55957 195 aa2.58□□□□□ -2
PALB2-203ENST00000565038 PARP10Q53GL7 1025 aa2.58□□□□□ -2
PALB2-203ENST00000565038 ATL3Q6DD88 541 aa2.58□□□□□ -2
PALB2-203ENST00000565038 LRRC8BQ6P9F7 803 aa2.58□□□□□ -2
PALB2-203ENST00000565038 CBLN3Q6UW01 205 aa2.58□□□□□ -2
PALB2-203ENST00000565038 UNC5DQ6UXZ4 953 aa2.58□□□□□ -2
PALB2-203ENST00000565038 KIAA1328Q86T90 577 aa2.58□□□□□ -2
PALB2-203ENST00000565038 ZNF786Q8N393 782 aa2.58□□□□□ -2
PALB2-203ENST00000565038 MARCH1Q8TCQ1 289 aa2.58□□□□□ -2
PALB2-203ENST00000565038 PNPT1Q8TCS8 783 aaKnown RBP2.58□□□□□ -2
PALB2-203ENST00000565038 GAL3ST1Q99999 423 aa2.58□□□□□ -2
PALB2-203ENST00000565038 CALHM2Q9HA72 323 aa2.58□□□□□ -2
PALB2-203ENST00000565038 PATZ1Q9HBE1 687 aaKnown RBP2.58□□□□□ -2
PALB2-203ENST00000565038 TREM2Q9NZC2 230 aa2.58□□□□□ -2
PALB2-203ENST00000565038 HOOK1Q9UJC3 728 aaKnown RBP2.58□□□□□ -2
PALB2-203ENST00000565038 PRPF19Q9UMS4 504 aaKnown RBP2.58□□□□□ -2
PALB2-203ENST00000565038 CHMP2BQ9UQN3 213 aa2.58□□□□□ -2
PALB2-203ENST00000565038 SLCO1B1Q9Y6L6 691 aa2.58□□□□□ -2
PALB2-203ENST00000565038 ANKRD63C9JTQ0 380 aa2.57□□□□□ -2
PALB2-203ENST00000565038 GFYI3L273 518 aa2.57□□□□□ -2
PALB2-203ENST00000565038 MMP1P03956 469 aa2.57□□□□□ -2
PALB2-203ENST00000565038 CSF2P04141 144 aa2.57□□□□□ -2
PALB2-203ENST00000565038 CYP2B6P20813 491 aa2.57□□□□□ -2
PALB2-203ENST00000565038 HTR1FP30939 366 aa2.57□□□□□ -2
PALB2-203ENST00000565038 LINC00315P59091 139 aa2.57□□□□□ -2
PALB2-203ENST00000565038 MAP2K1Q02750 393 aaPredicted RBP2.57□□□□□ -2
PALB2-203ENST00000565038 C1orf146Q5VVC0 180 aa2.57□□□□□ -2
PALB2-203ENST00000565038 CCDC137Q6PK04 289 aaKnown RBP2.57□□□□□ -2
PALB2-203ENST00000565038 ACOT7LQ6ZUV0 252 aa2.57□□□□□ -2
PALB2-203ENST00000565038 OR5L2Q8NGL0 311 aa2.57□□□□□ -2
PALB2-203ENST00000565038 BLOC1S5Q8TDH9 187 aa2.57□□□□□ -2
PALB2-203ENST00000565038 CHCHD10Q8WYQ3 142 aaPredicted RBP2.57□□□□□ -2
PALB2-203ENST00000565038 UCN3Q969E3 161 aa2.57□□□□□ -2
PALB2-203ENST00000565038 MYLPFQ96A32 169 aa2.57□□□□□ -2
PALB2-203ENST00000565038 CHRDL1Q9BU40 450 aa2.57□□□□□ -2
PALB2-203ENST00000565038 SPATA16Q9BXB7 569 aa2.57□□□□□ -2
PALB2-203ENST00000565038 MRPL13Q9BYD1 178 aaKnown RBP2.57□□□□□ -2
PALB2-203ENST00000565038 NAT10Q9H0A0 1025 aaKnown RBP2.57□□□□□ -2
PALB2-203ENST00000565038 ZNF385DQ9H6B1 395 aa2.57□□□□□ -2
PALB2-203ENST00000565038 MTRF1LQ9UGC7 380 aaKnown RBP2.57□□□□□ -2
PALB2-203ENST00000565038 ALG6Q9Y672 507 aa2.57□□□□□ -2
PALB2-203ENST00000565038 PPIAL4CA0A0B4J2A2 164 aa2.56□□□□□ -2
PALB2-203ENST00000565038 IGHV2-70DA0A0C4DH43 119 aa2.56□□□□□ -2
PALB2-203ENST00000565038 HELTA6NFD8 242 aa2.56□□□□□ -2
PALB2-203ENST00000565038 F8WDY8 70 aa2.56□□□□□ -2
PALB2-203ENST00000565038 CLDN5O00501 218 aa2.56□□□□□ -2
PALB2-203ENST00000565038 SNAI2O43623 268 aa2.56□□□□□ -2
PALB2-203ENST00000565038 ALOX5P09917 674 aa2.56□□□□□ -2
PALB2-203ENST00000565038 RBMY1CP0DJD4 496 aa2.56□□□□□ -2
PALB2-203ENST00000565038 PPIAL4GP0DN37 164 aa2.56□□□□□ -2
PALB2-203ENST00000565038 TNNI3P19429 210 aa2.56□□□□□ -2
PALB2-203ENST00000565038 TPSB2P20231 275 aa2.56□□□□□ -2
PALB2-203ENST00000565038 MAPK3P27361 379 aaPredicted RBP2.56□□□□□ -2
PALB2-203ENST00000565038 PRDX3P30048 256 aaKnown RBP2.56□□□□□ -2
PALB2-203ENST00000565038 LHX2P50458 406 aa2.56□□□□□ -2
PALB2-203ENST00000565038 IL1RL1Q01638 556 aa2.56□□□□□ -2
PALB2-203ENST00000565038 PDZK1IP1Q13113 114 aa2.56□□□□□ -2
PALB2-203ENST00000565038 GPNMBQ14956 572 aa2.56□□□□□ -2
PALB2-203ENST00000565038 TPSAB1Q15661 275 aa2.56□□□□□ -2
PALB2-203ENST00000565038 C12orf60Q5U649 245 aa2.56□□□□□ -2
PALB2-203ENST00000565038 ZNF691Q5VV52 312 aa2.56□□□□□ -2
PALB2-203ENST00000565038 CNSTQ6PJW8 725 aa2.56□□□□□ -2
PALB2-203ENST00000565038 ARSKQ6UWY0 536 aa2.56□□□□□ -2
PALB2-203ENST00000565038 SVOPLQ8N434 492 aa2.56□□□□□ -2
PALB2-203ENST00000565038 KIR3DL3Q8N743 410 aa2.56□□□□□ -2
PALB2-203ENST00000565038 DENND6BQ8NEG7 585 aa2.56□□□□□ -2
PALB2-203ENST00000565038 OR8H1Q8NGG4 311 aa2.56□□□□□ -2
PALB2-203ENST00000565038 OR56B4Q8NH76 319 aa2.56□□□□□ -2
PALB2-203ENST00000565038 RPL3LQ92901 407 aaKnown RBP2.56□□□□□ -2
PALB2-203ENST00000565038 TBX15Q96SF7 602 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms