RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 WWP2O00308 870 aa17.9■□□□□ 0.46
CLN6-205ENST00000564846 HCRTR2O43614 444 aa17.9■□□□□ 0.46
CLN6-205ENST00000564846 PNMTP11086 282 aa17.9■□□□□ 0.46
CLN6-205ENST00000564846 CLDN6P56747 220 aa17.9■□□□□ 0.46
CLN6-205ENST00000564846 ZNF117Q03924 483 aa17.9■□□□□ 0.46
CLN6-205ENST00000564846 RAB39AQ14964 217 aa17.9■□□□□ 0.46
CLN6-205ENST00000564846 OCLNQ16625 522 aa17.9■□□□□ 0.46
CLN6-205ENST00000564846 DHRS13Q6UX07 377 aa17.9■□□□□ 0.46
CLN6-205ENST00000564846 C16orf47Q6ZP98 133 aaPredicted RBP17.9■□□□□ 0.46
CLN6-205ENST00000564846 MISPQ8IVT2 679 aa17.9■□□□□ 0.46
CLN6-205ENST00000564846 SVOPQ8N4V2 548 aa17.9■□□□□ 0.46
CLN6-205ENST00000564846 FAM26EQ8N5C1 309 aa17.9■□□□□ 0.46
CLN6-205ENST00000564846 TMCO6Q96DC7 493 aa17.9■□□□□ 0.46
CLN6-205ENST00000564846 SIGLEC11Q96RL6 698 aa17.9■□□□□ 0.46
CLN6-205ENST00000564846 RHNO1Q9BSD3 238 aa17.9■□□□□ 0.46
CLN6-205ENST00000564846 DEFB126Q9BYW3 111 aa17.9■□□□□ 0.46
CLN6-205ENST00000564846 SLC19A3Q9BZV2 496 aa17.9■□□□□ 0.46
CLN6-205ENST00000564846 HS3ST3B1Q9Y662 390 aa17.9■□□□□ 0.46
CLN6-205ENST00000564846 CEPT1Q9Y6K0 416 aa17.9■□□□□ 0.46
CLN6-205ENST00000564846 HTR3EA5X5Y0 456 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 EFCAB9A8MZ26 197 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 FOXD2O60548 495 aaPredicted RBP17.89■□□□□ 0.45
CLN6-205ENST00000564846 RCBTB2O95199 551 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 NADKO95544 446 aaPredicted RBP17.89■□□□□ 0.45
CLN6-205ENST00000564846 RAB40ALP0C0E4 278 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 SAGP10523 405 aaPredicted RBP17.89■□□□□ 0.45
CLN6-205ENST00000564846 PCMT1P22061 227 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 TMED10P49755 219 aaKnown RBP17.89■□□□□ 0.45
CLN6-205ENST00000564846 NUDT6P53370 316 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 EFNB1P98172 346 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 SNAPC1Q16533 368 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 BTBD16Q32M84 506 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 MEDAGQ5VYS4 303 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 PRSS33Q8NF86 280 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 OR2T33Q8NG76 320 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 GGHQ92820 318 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 IMMP1LQ96LU5 166 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 SPRY4Q9C004 299 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 AMBNQ9NP70 447 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 ICAM5Q9UMF0 924 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 A0A1W2PQ72 361 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 PMS2P1A4D2B8 440 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 EFCAB10A6NFE3 127 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 CCDC160A6NGH7 325 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 C9orf172C9J069 976 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 H3BSA7 217 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 PRKYO43930 277 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 COX6A1P12074 109 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 BMP7P18075 431 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 TGM1P22735 817 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 MVKQ03426 396 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 EMX1Q04741 257 aaPredicted RBP17.89■□□□□ 0.45
CLN6-205ENST00000564846 CLEC12AQ5QGZ9 265 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 NUP54Q7Z3B4 507 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 OR52L1Q8NGH7 329 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 ZNF563Q8TA94 476 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 M1APQ8TC57 530 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 FANK1Q8TC84 345 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 SLC22A8Q8TCC7 542 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 TTC9Q92623 222 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 SH3YL1Q96HL8 342 aaPredicted RBP17.89■□□□□ 0.45
CLN6-205ENST00000564846 PHOX2BQ99453 314 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 OR52D1Q9H346 318 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 C12orf10Q9HB07 376 aa17.89■□□□□ 0.45
CLN6-205ENST00000564846 CNOT2Q9NZN8 540 aaKnown RBP17.89■□□□□ 0.45
CLN6-205ENST00000564846 ENO4A6NNW6 628 aa17.88■□□□□ 0.45
CLN6-205ENST00000564846 TLX2O43763 284 aaPredicted RBP17.88■□□□□ 0.45
CLN6-205ENST00000564846 HCN1O60741 890 aa17.88■□□□□ 0.45
CLN6-205ENST00000564846 ZNF354AO60765 605 aaPredicted RBP17.88■□□□□ 0.45
CLN6-205ENST00000564846 ENTPD6O75354 484 aa17.88■□□□□ 0.45
CLN6-205ENST00000564846 MT-ND2P03891 347 aa17.88■□□□□ 0.45
CLN6-205ENST00000564846 SLC1A3P43003 542 aa17.88■□□□□ 0.45
CLN6-205ENST00000564846 CRYZQ08257 329 aaKnown RBP17.88■□□□□ 0.45
CLN6-205ENST00000564846 TUBA3CQ13748 450 aa17.88■□□□□ 0.45
CLN6-205ENST00000564846 HES3Q5TGS1 186 aa17.88■□□□□ 0.45
CLN6-205ENST00000564846 PLAG1Q6DJT9 500 aa17.88■□□□□ 0.45
CLN6-205ENST00000564846 TIPARPQ7Z3E1 657 aaKnown RBP17.88■□□□□ 0.45
CLN6-205ENST00000564846 ATG4DQ86TL0 474 aaPredicted RBP17.88■□□□□ 0.45
CLN6-205ENST00000564846 SLC43A2Q8N370 569 aa17.88■□□□□ 0.45
CLN6-205ENST00000564846 SLC15A4Q8N697 577 aa17.88■□□□□ 0.45
CLN6-205ENST00000564846 OR5W2Q8NH69 310 aa17.88■□□□□ 0.45
CLN6-205ENST00000564846 HGDQ93099 445 aa17.88■□□□□ 0.45
CLN6-205ENST00000564846 SAMD8Q96LT4 415 aa17.88■□□□□ 0.45
CLN6-205ENST00000564846 SIGLEC7Q9Y286 467 aa17.88■□□□□ 0.45
CLN6-205ENST00000564846 KIF26BQ2KJY2 2108 aa17.88■□□□□ 0.45
CLN6-205ENST00000564846 ELOA3DA6NLF2 546 aaPredicted RBP17.87■□□□□ 0.45
CLN6-205ENST00000564846 SCO2O43819 266 aa17.87■□□□□ 0.45
CLN6-205ENST00000564846 IGF2P01344 180 aa17.87■□□□□ 0.45
CLN6-205ENST00000564846 HMGN1P05114 100 aa17.87■□□□□ 0.45
CLN6-205ENST00000564846 CDK1P06493 297 aa17.87■□□□□ 0.45
CLN6-205ENST00000564846 TCN2P20062 427 aa17.87■□□□□ 0.45
CLN6-205ENST00000564846 PGCP20142 388 aa17.87■□□□□ 0.45
CLN6-205ENST00000564846 P2RX1P51575 399 aa17.87■□□□□ 0.45
CLN6-205ENST00000564846 FBXW4P57775 412 aa17.87■□□□□ 0.45
CLN6-205ENST00000564846 CBFBQ13951 182 aa17.87■□□□□ 0.45
CLN6-205ENST00000564846 PGGHGQ32M88 737 aa17.87■□□□□ 0.45
CLN6-205ENST00000564846 CNPY1Q3B7I2 92 aa17.87■□□□□ 0.45
CLN6-205ENST00000564846 ELOA3BQ3SY89 546 aa17.87■□□□□ 0.45
CLN6-205ENST00000564846 STPG1Q5TH74 334 aa17.87■□□□□ 0.45
CLN6-205ENST00000564846 GTF2IRD2BQ6EKJ0 949 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms