RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 LRCOL1A6NCL2 159 aa2.73□□□□□ -1.97
UBR1-205ENST00000564540 GJE1A6NN92 205 aa2.73□□□□□ -1.97
UBR1-205ENST00000564540 ERVV-1B6SEH8 477 aa2.73□□□□□ -1.97
UBR1-205ENST00000564540 PTBP3O95758 552 aaKnown RBP2.73□□□□□ -1.97
UBR1-205ENST00000564540 TGFAP01135 160 aa2.73□□□□□ -1.97
UBR1-205ENST00000564540 PDHBP11177 359 aa2.73□□□□□ -1.97
UBR1-205ENST00000564540 ETS1P14921 441 aa2.73□□□□□ -1.97
UBR1-205ENST00000564540 HNRNPA2B1P22626 353 aaKnown RBP2.73□□□□□ -1.97
UBR1-205ENST00000564540 ACAA2P42765 397 aaKnown RBP2.73□□□□□ -1.97
UBR1-205ENST00000564540 BDKRB1P46663 353 aa2.73□□□□□ -1.97
UBR1-205ENST00000564540 CCR6P51684 374 aa2.73□□□□□ -1.97
UBR1-205ENST00000564540 ARFIP1P53367 373 aa2.73□□□□□ -1.97
UBR1-205ENST00000564540 PRPS1P60891 318 aa2.73□□□□□ -1.97
UBR1-205ENST00000564540 NTHL1P78549 312 aa2.73□□□□□ -1.97
UBR1-205ENST00000564540 SLC10A7Q0GE19 358 aa2.73□□□□□ -1.97
UBR1-205ENST00000564540 NDUFA9Q16795 377 aa2.73□□□□□ -1.97
UBR1-205ENST00000564540 TIGITQ495A1 244 aa2.73□□□□□ -1.97
UBR1-205ENST00000564540 ARSKQ6UWY0 536 aa2.73□□□□□ -1.97
UBR1-205ENST00000564540 ARCQ7LC44 396 aa2.73□□□□□ -1.97
UBR1-205ENST00000564540 ELMOD2Q8IZ81 293 aa2.73□□□□□ -1.97
UBR1-205ENST00000564540 SLC5A11Q8WWX8 675 aa2.73□□□□□ -1.97
UBR1-205ENST00000564540 TMEM186Q96B77 213 aa2.73□□□□□ -1.97
UBR1-205ENST00000564540 OR5B2Q96R09 309 aa2.73□□□□□ -1.97
UBR1-205ENST00000564540 SLC17A9Q9BYT1 436 aa2.73□□□□□ -1.97
UBR1-205ENST00000564540 PLA2G2FQ9BZM2 168 aa2.73□□□□□ -1.97
UBR1-205ENST00000564540 POLR2J2Q9GZM3 115 aaKnown RBP2.73□□□□□ -1.97
UBR1-205ENST00000564540 POLR2J3Q9H1A7 115 aaKnown RBP2.73□□□□□ -1.97
UBR1-205ENST00000564540 AP4B1Q9Y6B7 739 aa2.73□□□□□ -1.97
UBR1-205ENST00000564540 A0A1B0GWB2 263 aa2.72□□□□□ -1.97
UBR1-205ENST00000564540 NOL3O60936 208 aaKnown RBP2.72□□□□□ -1.97
UBR1-205ENST00000564540 PEX11AO75192 247 aa2.72□□□□□ -1.97
UBR1-205ENST00000564540 ZNF780AO75290 641 aaPredicted RBP2.72□□□□□ -1.97
UBR1-205ENST00000564540 SNAPINO95295 136 aa2.72□□□□□ -1.97
UBR1-205ENST00000564540 SUCLG1P53597 346 aaKnown RBP2.72□□□□□ -1.97
UBR1-205ENST00000564540 GMFBP60983 142 aa2.72□□□□□ -1.97
UBR1-205ENST00000564540 MADCAM1Q13477 382 aa2.72□□□□□ -1.97
UBR1-205ENST00000564540 LAGE3Q14657 143 aa2.72□□□□□ -1.97
UBR1-205ENST00000564540 SHHQ15465 462 aa2.72□□□□□ -1.97
UBR1-205ENST00000564540 LIPNQ5VXI9 398 aa2.72□□□□□ -1.97
UBR1-205ENST00000564540 KDELC1Q6UW63 502 aa2.72□□□□□ -1.97
UBR1-205ENST00000564540 NRMQ8IXM6 262 aa2.72□□□□□ -1.97
UBR1-205ENST00000564540 PAQR8Q8TEZ7 354 aa2.72□□□□□ -1.97
UBR1-205ENST00000564540 RNF185Q96GF1 192 aa2.72□□□□□ -1.97
UBR1-205ENST00000564540 SAMD8Q96LT4 415 aa2.72□□□□□ -1.97
UBR1-205ENST00000564540 VSTM2LQ96N03 204 aa2.72□□□□□ -1.97
UBR1-205ENST00000564540 KCNK16Q96T55 309 aa2.72□□□□□ -1.97
UBR1-205ENST00000564540 CRACR2AQ9BSW2 395 aa2.72□□□□□ -1.97
UBR1-205ENST00000564540 ROPN1Q9HAT0 212 aaPredicted RBP2.72□□□□□ -1.97
UBR1-205ENST00000564540 YAE1D1Q9NRH1 226 aa2.72□□□□□ -1.97
UBR1-205ENST00000564540 B3GNT2Q9NY97 397 aa2.72□□□□□ -1.97
UBR1-205ENST00000564540 WRAP73Q9P2S5 460 aaPredicted RBP2.72□□□□□ -1.97
UBR1-205ENST00000564540 ZNF282Q9UDV7 671 aaPredicted RBP2.72□□□□□ -1.97
UBR1-205ENST00000564540 TP53TG5Q9Y2B4 290 aa2.72□□□□□ -1.97
UBR1-205ENST00000564540 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.71□□□□□ -1.98
UBR1-205ENST00000564540 SYNJ2BP-COX16A0A087WUM0 186 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 A0A0G2JRQ6 117 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 PP2D1A8MPX8 630 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 SULT2B1O00204 365 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 DLGAP1O14490 977 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 DUX1O43812 170 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 TPM2P07951 284 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 MAGP20916 626 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 COX7A1P24310 79 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 PRDX3P30048 256 aaKnown RBP2.71□□□□□ -1.98
UBR1-205ENST00000564540 PMELP40967 661 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 MAGEA5P43359 124 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 TDO2P48775 406 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 ARFRP1Q13795 201 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 GAMTQ14353 236 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 C16orf72Q14CZ0 275 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 INAQ16352 499 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 ADPRMQ3LIE5 342 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 TSPO2Q5TGU0 170 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 KRTAP5-7Q6L8G8 165 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 FAM199XQ6PEV8 388 aaPredicted RBP2.71□□□□□ -1.98
UBR1-205ENST00000564540 ACP7Q6ZNF0 438 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 RBM43Q6ZSC3 357 aaKnown RBP2.71□□□□□ -1.98
UBR1-205ENST00000564540 KDM8Q8N371 416 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 GMCL1P1Q8NEA9 526 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 OR56B1Q8NGI3 324 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 CCDC110Q8TBZ0 833 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 PIGCQ92535 297 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 TBCDQ9BTW9 1192 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 DPH5Q9H2P9 285 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 POLD4Q9HCU8 107 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 POLE3Q9NRF9 147 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 SLC35D1Q9NTN3 355 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 NECAP2Q9NVZ3 263 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 MRPL39Q9NYK5 338 aaKnown RBP2.71□□□□□ -1.98
UBR1-205ENST00000564540 STOX2Q9P2F5 926 aaPredicted RBP2.71□□□□□ -1.98
UBR1-205ENST00000564540 MTRF1LQ9UGC7 380 aaKnown RBP2.71□□□□□ -1.98
UBR1-205ENST00000564540 FOXJ3Q9UPW0 622 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 NEUROG3Q9Y4Z2 214 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 IKBKGQ9Y6K9 419 aa2.71□□□□□ -1.98
UBR1-205ENST00000564540 IGLV4-69A0A075B6H9 119 aa2.7□□□□□ -1.98
UBR1-205ENST00000564540 NKX2-6A6NCS4 301 aa2.7□□□□□ -1.98
UBR1-205ENST00000564540 GFYI3L273 518 aa2.7□□□□□ -1.98
UBR1-205ENST00000564540 RASGRF2O14827 1237 aa2.7□□□□□ -1.98
UBR1-205ENST00000564540 RIPK2O43353 540 aa2.7□□□□□ -1.98
UBR1-205ENST00000564540 FAM189A1O60320 539 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms