RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 POU3F2P20265 443 aaPredicted RBP17.03■□□□□ 0.32
RAB40C-207ENST00000563109 ATP6V1B2P21281 511 aa17.03■□□□□ 0.32
RAB40C-207ENST00000563109 ELK4P28324 431 aa17.03■□□□□ 0.32
RAB40C-207ENST00000563109 SLC1A3P43003 542 aa17.03■□□□□ 0.32
RAB40C-207ENST00000563109 ZNF136P52737 540 aa17.03■□□□□ 0.32
RAB40C-207ENST00000563109 HOXC5Q00444 222 aa17.03■□□□□ 0.32
RAB40C-207ENST00000563109 MERTKQ12866 999 aa17.03■□□□□ 0.32
RAB40C-207ENST00000563109 TMEM44Q2T9K0 475 aa17.03■□□□□ 0.32
RAB40C-207ENST00000563109 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.03■□□□□ 0.32
RAB40C-207ENST00000563109 SLC25A53Q5H9E4 307 aa17.03■□□□□ 0.32
RAB40C-207ENST00000563109 NHSL2Q5HYW2 709 aa17.03■□□□□ 0.32
RAB40C-207ENST00000563109 PGM2L1Q6PCE3 622 aa17.03■□□□□ 0.32
RAB40C-207ENST00000563109 ENPP6Q6UWR7 440 aa17.03■□□□□ 0.32
RAB40C-207ENST00000563109 ASRGL1Q7L266 308 aa17.03■□□□□ 0.32
RAB40C-207ENST00000563109 VTCN1Q7Z7D3 282 aa17.03■□□□□ 0.32
RAB40C-207ENST00000563109 OR10Q1Q8NGQ4 319 aa17.03■□□□□ 0.32
RAB40C-207ENST00000563109 POP5Q969H6 163 aaKnown RBP17.03■□□□□ 0.32
RAB40C-207ENST00000563109 ABTB1Q969K4 478 aaPredicted RBP17.03■□□□□ 0.32
RAB40C-207ENST00000563109 MCHR1Q99705 422 aa17.03■□□□□ 0.32
RAB40C-207ENST00000563109 TRIM2Q9C040 744 aa17.03■□□□□ 0.32
RAB40C-207ENST00000563109 TMEM27Q9HBJ8 222 aa17.03■□□□□ 0.32
RAB40C-207ENST00000563109 SERINC1Q9NRX5 453 aa17.03■□□□□ 0.32
RAB40C-207ENST00000563109 SELENONQ9NZV5 590 aa17.03■□□□□ 0.32
RAB40C-207ENST00000563109 ZFYVE26Q68DK2 2539 aa17.03■□□□□ 0.32
RAB40C-207ENST00000563109 H3BML4 177 aa17.02■□□□□ 0.32
RAB40C-207ENST00000563109 ETV2O00321 342 aaPredicted RBP17.02■□□□□ 0.32
RAB40C-207ENST00000563109 FMO6PO60774 539 aa17.02■□□□□ 0.32
RAB40C-207ENST00000563109 CIB2O75838 187 aa17.02■□□□□ 0.32
RAB40C-207ENST00000563109 IFNW1P05000 195 aa17.02■□□□□ 0.32
RAB40C-207ENST00000563109 ABOP16442 354 aa17.02■□□□□ 0.32
RAB40C-207ENST00000563109 TNFRSF1BP20333 461 aa17.02■□□□□ 0.32
RAB40C-207ENST00000563109 PTGS2P35354 604 aa17.02■□□□□ 0.32
RAB40C-207ENST00000563109 POLR2HP52434 150 aaKnown RBP17.02■□□□□ 0.32
RAB40C-207ENST00000563109 GFRA1P56159 465 aa17.02■□□□□ 0.32
RAB40C-207ENST00000563109 B3GALT5-AS1P59052 145 aa17.02■□□□□ 0.32
RAB40C-207ENST00000563109 KCNC4Q03721 635 aa17.02■□□□□ 0.32
RAB40C-207ENST00000563109 SELENBP1Q13228 472 aa17.02■□□□□ 0.32
RAB40C-207ENST00000563109 FLOT2Q14254 428 aa17.02■□□□□ 0.32
RAB40C-207ENST00000563109 ZSCAN26Q16670 478 aa17.02■□□□□ 0.32
RAB40C-207ENST00000563109 PLEKHM3Q6ZWE6 761 aa17.02■□□□□ 0.32
RAB40C-207ENST00000563109 ATCAYQ86WG3 371 aa17.02■□□□□ 0.32
RAB40C-207ENST00000563109 OR6T1Q8NGN1 323 aa17.02■□□□□ 0.32
RAB40C-207ENST00000563109 POC1BQ8TC44 478 aa17.02■□□□□ 0.32
RAB40C-207ENST00000563109 MIB2Q96AX9 1013 aa17.02■□□□□ 0.32
RAB40C-207ENST00000563109 UGT2B28Q9BY64 529 aa17.02■□□□□ 0.32
RAB40C-207ENST00000563109 SPRR3Q9UBC9 169 aa17.02■□□□□ 0.32
RAB40C-207ENST00000563109 SPIN1Q9Y657 262 aaPredicted RBP17.02■□□□□ 0.32
RAB40C-207ENST00000563109 V9GYQ6 96 aa17.02■□□□□ 0.32
RAB40C-207ENST00000563109 SHANK1Q9Y566 2161 aa17.01■□□□□ 0.31
RAB40C-207ENST00000563109 BCKDKO14874 412 aa17.01■□□□□ 0.31
RAB40C-207ENST00000563109 WISP2O76076 250 aa17.01■□□□□ 0.31
RAB40C-207ENST00000563109 PRKD3O94806 890 aa17.01■□□□□ 0.31
RAB40C-207ENST00000563109 NTN1O95631 604 aa17.01■□□□□ 0.31
RAB40C-207ENST00000563109 BMP7P18075 431 aa17.01■□□□□ 0.31
RAB40C-207ENST00000563109 APOBEC1P41238 236 aaKnown RBP17.01■□□□□ 0.31
RAB40C-207ENST00000563109 OR1E2P47887 323 aa17.01■□□□□ 0.31
RAB40C-207ENST00000563109 DLX5P56178 289 aa17.01■□□□□ 0.31
RAB40C-207ENST00000563109 FOXK1P85037 733 aa17.01■□□□□ 0.31
RAB40C-207ENST00000563109 MS4A2Q01362 244 aa17.01■□□□□ 0.31
RAB40C-207ENST00000563109 WLSQ5T9L3 541 aa17.01■□□□□ 0.31
RAB40C-207ENST00000563109 C3orf33Q6P1S2 294 aa17.01■□□□□ 0.31
RAB40C-207ENST00000563109 POMZP3Q6PJE2 187 aa17.01■□□□□ 0.31
RAB40C-207ENST00000563109 DEF8Q6ZN54 512 aa17.01■□□□□ 0.31
RAB40C-207ENST00000563109 LACC1Q8IV20 430 aa17.01■□□□□ 0.31
RAB40C-207ENST00000563109 SMPDL3BQ92485 455 aa17.01■□□□□ 0.31
RAB40C-207ENST00000563109 POLR2J2Q9GZM3 115 aaKnown RBP17.01■□□□□ 0.31
RAB40C-207ENST00000563109 POLR2J3Q9H1A7 115 aaKnown RBP17.01■□□□□ 0.31
RAB40C-207ENST00000563109 SLC7A8Q9UHI5 535 aa17.01■□□□□ 0.31
RAB40C-207ENST00000563109 ACAD8Q9UKU7 415 aa17.01■□□□□ 0.31
RAB40C-207ENST00000563109 AP4B1Q9Y6B7 739 aa17.01■□□□□ 0.31
RAB40C-207ENST00000563109 GJE1A6NN92 205 aa17■□□□□ 0.31
RAB40C-207ENST00000563109 TMEM229AB2RXF0 380 aa17■□□□□ 0.31
RAB40C-207ENST00000563109 NPIPA2E9PIF3 369 aa17■□□□□ 0.31
RAB40C-207ENST00000563109 NPIPA3F8WFD2 350 aa17■□□□□ 0.31
RAB40C-207ENST00000563109 ACOT8O14734 319 aa17■□□□□ 0.31
RAB40C-207ENST00000563109 PEPDP12955 493 aa17■□□□□ 0.31
RAB40C-207ENST00000563109 HTR2AP28223 471 aa17■□□□□ 0.31
RAB40C-207ENST00000563109 TACR3P29371 465 aa17■□□□□ 0.31
RAB40C-207ENST00000563109 IFNA8P32881 189 aa17■□□□□ 0.31
RAB40C-207ENST00000563109 CRYZQ08257 329 aaKnown RBP17■□□□□ 0.31
RAB40C-207ENST00000563109 OR1Q1Q15612 314 aa17■□□□□ 0.31
RAB40C-207ENST00000563109 NPTX1Q15818 432 aa17■□□□□ 0.31
RAB40C-207ENST00000563109 VASNQ6EMK4 673 aa17■□□□□ 0.31
RAB40C-207ENST00000563109 PM20D2Q8IYS1 436 aa17■□□□□ 0.31
RAB40C-207ENST00000563109 MEIOBQ8N635 442 aa17■□□□□ 0.31
RAB40C-207ENST00000563109 LSMEM1Q8N8F7 131 aa17■□□□□ 0.31
RAB40C-207ENST00000563109 GALNT11Q8NCW6 608 aa17■□□□□ 0.31
RAB40C-207ENST00000563109 OR4D11Q8NGI4 311 aa17■□□□□ 0.31
RAB40C-207ENST00000563109 RNF217Q8TC41 542 aa17■□□□□ 0.31
RAB40C-207ENST00000563109 DNAJA4Q8WW22 397 aaPredicted RBP17■□□□□ 0.31
RAB40C-207ENST00000563109 PYURFQ96I23 114 aa17■□□□□ 0.31
RAB40C-207ENST00000563109 NPAS1Q99742 590 aa17■□□□□ 0.31
RAB40C-207ENST00000563109 CTPS2Q9NRF8 586 aa17■□□□□ 0.31
RAB40C-207ENST00000563109 POMPQ9Y244 141 aa17■□□□□ 0.31
RAB40C-207ENST00000563109 ZNF337Q9Y3M9 751 aa17■□□□□ 0.31
RAB40C-207ENST00000563109 A0A1B0GWA3 101 aa16.99■□□□□ 0.31
RAB40C-207ENST00000563109 CPSF4LA6NMK7 179 aaKnown RBP16.99■□□□□ 0.31
RAB40C-207ENST00000563109 PRRG2O14669 202 aa16.99■□□□□ 0.31
RAB40C-207ENST00000563109 TPOP07202 933 aa16.99■□□□□ 0.31
RAB40C-207ENST00000563109 CXCR1P25024 350 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms