RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 LCN1P31025 176 aa7.51□□□□□ -1.21
PALB2-202ENST00000561514 FRKP42685 505 aaPredicted RBP7.51□□□□□ -1.21
PALB2-202ENST00000561514 SLC6A8P48029 635 aa7.51□□□□□ -1.21
PALB2-202ENST00000561514 HSPA13P48723 471 aa7.51□□□□□ -1.21
PALB2-202ENST00000561514 NCBP2P52298 156 aaKnown RBP eCLIP7.51□□□□□ -1.21
PALB2-202ENST00000561514 CHN2P52757 468 aa7.51□□□□□ -1.21
PALB2-202ENST00000561514 FOXA1P55317 472 aa7.51□□□□□ -1.21
PALB2-202ENST00000561514 NAA20P61599 178 aa7.51□□□□□ -1.21
PALB2-202ENST00000561514 C17orf67Q0P5P2 114 aa7.51□□□□□ -1.21
PALB2-202ENST00000561514 KIAA0040Q15053 153 aa7.51□□□□□ -1.21
PALB2-202ENST00000561514 TRMT5Q32P41 509 aaKnown RBP7.51□□□□□ -1.21
PALB2-202ENST00000561514 C6orf10Q5SRN2 563 aa7.51□□□□□ -1.21
PALB2-202ENST00000561514 PPP4R4Q6NUP7 873 aa7.51□□□□□ -1.21
PALB2-202ENST00000561514 TMEM107Q6UX40 140 aa7.51□□□□□ -1.21
PALB2-202ENST00000561514 SEZ6L2Q6UXD5 910 aa7.51□□□□□ -1.21
PALB2-202ENST00000561514 ZNF704Q6ZNC4 412 aaPredicted RBP7.51□□□□□ -1.21
PALB2-202ENST00000561514 RNF165Q6ZSG1 346 aa7.51□□□□□ -1.21
PALB2-202ENST00000561514 CXXC5Q7LFL8 322 aaKnown RBP7.51□□□□□ -1.21
PALB2-202ENST00000561514 MARCH3Q86UD3 253 aa7.51□□□□□ -1.21
PALB2-202ENST00000561514 TRIML2Q8N7C3 387 aa7.51□□□□□ -1.21
PALB2-202ENST00000561514 FAM110BQ8TC76 370 aa7.51□□□□□ -1.21
PALB2-202ENST00000561514 DUSP19Q8WTR2 217 aa7.51□□□□□ -1.21
PALB2-202ENST00000561514 MZB1Q8WU39 189 aa7.51□□□□□ -1.21
PALB2-202ENST00000561514 ZBTB8AQ96BR9 441 aa7.51□□□□□ -1.21
PALB2-202ENST00000561514 FCRL1Q96LA6 429 aa7.51□□□□□ -1.21
PALB2-202ENST00000561514 KCNA7Q96RP8 456 aa7.51□□□□□ -1.21
PALB2-202ENST00000561514 PSD2Q9BQI7 771 aa7.51□□□□□ -1.21
PALB2-202ENST00000561514 EBPLQ9BY08 206 aa7.51□□□□□ -1.21
PALB2-202ENST00000561514 C3orf14Q9HBI5 128 aa7.51□□□□□ -1.21
PALB2-202ENST00000561514 DDX18Q9NVP1 670 aaKnown RBP7.51□□□□□ -1.21
PALB2-202ENST00000561514 NDE1Q9NXR1 346 aa7.51□□□□□ -1.21
PALB2-202ENST00000561514 SENP1Q9P0U3 644 aa7.51□□□□□ -1.21
PALB2-202ENST00000561514 RSL24D1Q9UHA3 163 aaKnown RBP7.51□□□□□ -1.21
PALB2-202ENST00000561514 MRTO4Q9UKD2 239 aaKnown RBP7.51□□□□□ -1.21
PALB2-202ENST00000561514 GPR52Q9Y2T5 361 aa7.51□□□□□ -1.21
PALB2-202ENST00000561514 EMC9Q9Y3B6 208 aa7.51□□□□□ -1.21
PALB2-202ENST00000561514 NBEAL1Q6ZS30 2694 aa7.51□□□□□ -1.21
PALB2-202ENST00000561514 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 A0A1W2PRB8 838 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 SNTNA6NMZ2 147 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 INAFM1C9JVW0 142 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 CRLF1O75462 422 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 GCM2O75603 506 aaPredicted RBP7.5□□□□□ -1.21
PALB2-202ENST00000561514 B3GALNT1O75752 331 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 TNFAIP8O95379 198 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 UBTFL6P0CB48 400 aaPredicted RBP7.5□□□□□ -1.21
PALB2-202ENST00000561514 ELK4P28324 431 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 PCSK6P29122 969 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 KCNJ5P48544 419 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 CLK3P49761 638 aaKnown RBP7.5□□□□□ -1.21
PALB2-202ENST00000561514 RAC1P63000 192 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 STX5Q13190 355 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 PDE7AQ13946 482 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 SLC29A2Q14542 456 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 ZNHIT3Q15649 155 aaPredicted RBP7.5□□□□□ -1.21
PALB2-202ENST00000561514 ETFDHQ16134 617 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 PLPPR5Q32ZL2 321 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 GRAMD1BQ3KR37 738 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 DNM1P46Q6ZS02 220 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 LINC00299Q6ZSB3 139 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 BEND4Q6ZU67 534 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 FRMD7Q6ZUT3 714 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 ESPNLQ6ZVH7 1005 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 GALNT10Q86SR1 603 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 MISPQ8IVT2 679 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 GABRG1Q8N1C3 465 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 FITM2Q8N6M3 262 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 ARL6IP6Q8N6S5 226 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 PCYOX1LQ8NBM8 494 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 OR5M1Q8NGP8 315 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 OR10D3Q8NH80 312 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 OR2V1Q8NHB1 315 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 RNF128Q8TEB7 428 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 TMEM171Q8WVE6 324 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 UBLCP1Q8WVY7 318 aaPredicted RBP7.5□□□□□ -1.21
PALB2-202ENST00000561514 UTP4Q969X6 686 aaKnown RBP7.5□□□□□ -1.21
PALB2-202ENST00000561514 NMD3Q96D46 503 aaKnown RBP7.5□□□□□ -1.21
PALB2-202ENST00000561514 GIMAP5Q96F15 307 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 MAGEB18Q96M61 343 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 NEURL2Q9BR09 285 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 RBM38Q9H0Z9 239 aaKnown RBP7.5□□□□□ -1.21
PALB2-202ENST00000561514 DENND2DQ9H6A0 471 aaPredicted RBP7.5□□□□□ -1.21
PALB2-202ENST00000561514 GP6Q9HCN6 339 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 FANCFQ9NPI8 374 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 MED17Q9NVC6 651 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 EMCNQ9ULC0 261 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 MCTS1Q9ULC4 181 aaKnown RBP7.5□□□□□ -1.21
PALB2-202ENST00000561514 ACTL7BQ9Y614 415 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 ANK2Q01484 3957 aa7.5□□□□□ -1.21
PALB2-202ENST00000561514 LINC00854A0A1B0GVQ3 168 aa7.49□□□□□ -1.21
PALB2-202ENST00000561514 EXOC1LA0A1B0GW35 172 aa7.49□□□□□ -1.21
PALB2-202ENST00000561514 A0A1W2PQD3 144 aa7.49□□□□□ -1.21
PALB2-202ENST00000561514 GXYLT2A0PJZ3 443 aa7.49□□□□□ -1.21
PALB2-202ENST00000561514 FAM172BPA6NC97 362 aa7.49□□□□□ -1.21
PALB2-202ENST00000561514 SHISA8B8ZZ34 492 aa7.49□□□□□ -1.21
PALB2-202ENST00000561514 POC1B-GALNT4F8VUJ3 575 aa7.49□□□□□ -1.21
PALB2-202ENST00000561514 G3V2L1 256 aa7.49□□□□□ -1.21
PALB2-202ENST00000561514 ETV2O00321 342 aaPredicted RBP7.49□□□□□ -1.21
PALB2-202ENST00000561514 EIF1AYO14602 144 aaKnown RBP7.49□□□□□ -1.21
PALB2-202ENST00000561514 ZNF254O75437 659 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms