RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 ADCK1Q86TW2 530 aa3.09□□□□□ -1.91
HERC1-215ENST00000561436 CBWD2Q8IUF1 395 aa3.09□□□□□ -1.91
HERC1-215ENST00000561436 PARP8Q8N3A8 854 aa3.09□□□□□ -1.91
HERC1-215ENST00000561436 SLC25A45Q8N413 288 aa3.09□□□□□ -1.91
HERC1-215ENST00000561436 BANPQ8N9N5 519 aa3.09□□□□□ -1.91
HERC1-215ENST00000561436 AQP11Q8NBQ7 271 aa3.09□□□□□ -1.91
HERC1-215ENST00000561436 BEST4Q8NFU0 473 aa3.09□□□□□ -1.91
HERC1-215ENST00000561436 FBXO25Q8TCJ0 367 aa3.09□□□□□ -1.91
HERC1-215ENST00000561436 RNF139Q8WU17 664 aa3.09□□□□□ -1.91
HERC1-215ENST00000561436 TMEM186Q96B77 213 aa3.09□□□□□ -1.91
HERC1-215ENST00000561436 SPATA13Q96N96 652 aa3.09□□□□□ -1.91
HERC1-215ENST00000561436 TNFRSF13CQ96RJ3 184 aa3.09□□□□□ -1.91
HERC1-215ENST00000561436 DCTN5Q9BTE1 182 aa3.09□□□□□ -1.91
HERC1-215ENST00000561436 NEUROG2Q9H2A3 272 aa3.09□□□□□ -1.91
HERC1-215ENST00000561436 PARLQ9H300 379 aa3.09□□□□□ -1.91
HERC1-215ENST00000561436 DPEP3Q9H4B8 488 aa3.09□□□□□ -1.91
HERC1-215ENST00000561436 WDR41Q9HAD4 459 aa3.09□□□□□ -1.91
HERC1-215ENST00000561436 DMAC2Q9NW81 257 aa3.09□□□□□ -1.91
HERC1-215ENST00000561436 NDUFA13Q9P0J0 144 aa3.09□□□□□ -1.91
HERC1-215ENST00000561436 EIF3KQ9UBQ5 218 aaKnown RBP3.09□□□□□ -1.91
HERC1-215ENST00000561436 CYTH4Q9UIA0 394 aa3.09□□□□□ -1.91
HERC1-215ENST00000561436 DIMT1Q9UNQ2 313 aaKnown RBP3.09□□□□□ -1.91
HERC1-215ENST00000561436 ERVW-1Q9UQF0 538 aa3.09□□□□□ -1.91
HERC1-215ENST00000561436 SLC9A8Q9Y2E8 581 aa3.09□□□□□ -1.91
HERC1-215ENST00000561436 MOB4Q9Y3A3 225 aa3.09□□□□□ -1.91
HERC1-215ENST00000561436 MYO9BQ13459 2157 aa3.09□□□□□ -1.91
HERC1-215ENST00000561436 TRIOO75962 3097 aa3.09□□□□□ -1.91
HERC1-215ENST00000561436 MYO7AQ13402 2215 aa3.09□□□□□ -1.91
HERC1-215ENST00000561436 COL4A2P08572 1712 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 CEP250Q9BV73 2442 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 MAP1BP46821 2468 aaKnown RBP3.08□□□□□ -1.92
HERC1-215ENST00000561436 VPS13AQ96RL7 3174 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 IGHV3-20A0A0C4DH32 117 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 GOLGA8IPA6NC78 632 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 GOLGA8JA6NMD2 632 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 H7C423 109 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 FBP2O00757 339 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 PDXKO00764 312 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 XPO1O14980 1071 aaKnown RBP3.08□□□□□ -1.92
HERC1-215ENST00000561436 MCF2LO15068 1137 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 PRPSAP2O60256 369 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 CALCAP01258 141 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 HNRNPA2B1P22626 353 aaKnown RBP3.08□□□□□ -1.92
HERC1-215ENST00000561436 YBEYP58557 167 aaPredicted RBP3.08□□□□□ -1.92
HERC1-215ENST00000561436 GMFBP60983 142 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 RPS21P63220 83 aaKnown RBP3.08□□□□□ -1.92
HERC1-215ENST00000561436 DNAJC3Q13217 504 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 P2RY14Q15391 338 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 LINC00303Q3SY05 128 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 CMPK2Q5EBM0 449 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 AGAP7PQ5VUJ5 663 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 IL23RQ5VWK5 629 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 ATL3Q6DD88 541 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 FBXL22Q6P050 247 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 ZNF613Q6PF04 617 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 KDM7AQ6ZMT4 941 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 ADAMTSL2Q86TH1 951 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 ACOT1Q86TX2 421 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 KCNMB4Q86W47 210 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 PARGQ86W56 976 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 HORMAD1Q86X24 394 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 FAM131BQ86XD5 332 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 MLKLQ8NB16 471 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 DENND6BQ8NEG7 585 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 ZNF564Q8TBZ8 553 aaPredicted RBP3.08□□□□□ -1.92
HERC1-215ENST00000561436 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.08□□□□□ -1.92
HERC1-215ENST00000561436 OR8D1Q8WZ84 308 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 GTF3AQ92664 365 aaKnown RBP3.08□□□□□ -1.92
HERC1-215ENST00000561436 RAB7BQ96AH8 199 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 CCDC127Q96BQ5 260 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 MOCOSQ96EN8 888 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 C16orf58Q96GQ5 468 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 PPP1R16AQ96I34 528 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 HSFY1Q96LI6 401 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 FAM111AQ96PZ2 611 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 PLIN2Q99541 437 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 ATF6BQ99941 703 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 ZSCAN16Q9H4T2 348 aaPredicted RBP3.08□□□□□ -1.92
HERC1-215ENST00000561436 SMYD3Q9H7B4 428 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 ELL3Q9HB65 397 aaPredicted RBP3.08□□□□□ -1.92
HERC1-215ENST00000561436 DEPPQ9NTK1 212 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 TECRQ9NZ01 308 aaKnown RBP3.08□□□□□ -1.92
HERC1-215ENST00000561436 THYN1Q9P016 225 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 SPASTQ9UBP0 616 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 DNPEPQ9ULA0 475 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 TRAF3IP3Q9Y228 551 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 MYO18BQ8IUG5 2567 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 USP24Q9UPU5 2620 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 FAM208BQ5VWN6 2430 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 SPEGQ15772 3267 aa3.08□□□□□ -1.92
HERC1-215ENST00000561436 KIAA1671Q9BY89 1806 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 ATG2AQ2TAZ0 1938 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 IGHV3-38A0A0C4DH36 116 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 A0A0J9YWU9 116 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 SPTY2D1-AS1A0A0U1RR47 76 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 FAM47DPA6NHR8 397 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 A8MXK9 166 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 G3V2L1 256 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 AQP9O43315 295 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 HCRTO43612 131 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms