RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	SOX6	P35712	828 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	PTGFR	P43088	359 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	STK19	P49842	368 aa	Predicted RBP	4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	CCNA1	P78396	465 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	GPM6B	Q13491	265 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	SLC10A1	Q14973	349 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	RAB35	Q15286	201 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	TRIP10	Q15642	601 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	UBE2V2	Q15819	145 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	CDKN3	Q16667	212 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	CCDC57	Q2TAC2	916 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	USH1G	Q495M9	461 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	HIGD2B	Q4VC39	106 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	SPATA46	Q5T0L3	261 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	FBXL22	Q6P050	247 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	LHFPL4	Q7Z7J7	247 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	C10orf67	Q8IYJ2	551 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	OR56B2P	Q8NGI1	322 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	SUN5	Q8TC36	379 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	FNDC8	Q8TC99	324 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	ZNF75CP	Q92670	426 aa	Predicted RBP	4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	ANKRD9	Q96BM1	317 aa	Predicted RBP	4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	CNOT6L	Q96LI5	555 aa	Known RBP	4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	C1orf147	Q96MC9	270 aa	Predicted RBP	4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	VSTM2L	Q96N03	204 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	FICD	Q9BVA6	458 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	CAPS2	Q9BXY5	557 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	CENPH	Q9H3R5	247 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	COQ10B	Q9H8M1	238 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	MEPE	Q9NQ76	525 aa	Predicted RBP	4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	TIGAR	Q9NQ88	270 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	CUTC	Q9NTM9	273 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	CLEC5A	Q9NY25	188 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	N6AMT1	Q9Y5N5	214 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	HTT	P42858	3142 aa		4.19	□□□□□ -1.74
TCF12-223	ENST00000561235	ITGB4	P16144	1822 aa		4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	LAMA3	Q16787	3333 aa		4.18	□□□□□ -1.74
TCF12-223	ENST00000561235		A0A087WWV3	80 aa		4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	LRRC30	A6NM36	301 aa		4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	WASH3P	C4AMC7	463 aa		4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	SDHD	O14521	159 aa		4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	CASK	O14936	926 aa		4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	GPRIN2	O60269	458 aa		4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	RHBDL1	O75783	438 aa		4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	YEATS4	O95619	227 aa		4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	SNRPC	P09234	159 aa	Known RBP	4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	ALPI	P09923	528 aa		4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	TROVE2	P10155	538 aa	Known RBP eCLIP	4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	DSCR10	P59022	87 aa		4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	LMO4	P61968	165 aa		4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	CHIT1	Q13231	466 aa		4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	DYNC1I2	Q13409	638 aa	Known RBP	4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	WDR43	Q15061	677 aa	Known RBP eCLIP	4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	ATAD3B	Q5T9A4	648 aa		4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	SLX4IP	Q5VYV7	408 aa		4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	BTNL3	Q6UXE8	466 aa		4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	WASH2P	Q6VEQ5	465 aa		4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	ZNF600	Q6ZNG1	722 aa		4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	GCNT2	Q8N0V5	402 aa		4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	TADA1	Q96BN2	335 aa		4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	C8orf76	Q96K31	380 aa		4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	TESK2	Q96S53	571 aa		4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	ERP44	Q9BS26	406 aa		4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	TPPP3	Q9BW30	176 aa		4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	TBC1D10A	Q9BXI6	508 aa		4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	TSGA10	Q9BZW7	698 aa		4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	RPS10P5	Q9NQ39	176 aa		4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	CHMP5	Q9NZZ3	219 aa		4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	PAIP2B	Q9ULR5	123 aa	Known RBP	4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	EXOSC1	Q9Y3B2	195 aa	Known RBP	4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	MAPK8IP3	Q9UPT6	1336 aa		4.18	□□□□□ -1.74
TCF12-223	ENST00000561235	FAM208A	Q9UK61	1670 aa	Known RBP	4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	AFDN	P55196	1824 aa	Known RBP	4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	IQANK1	A0A1B0GTG1	560 aa		4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	CTAGE15	A4D2H0	777 aa		4.17	□□□□□ -1.74
TCF12-223	ENST00000561235		M0QX08	132 aa		4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	LIN7A	O14910	233 aa	Predicted RBP	4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	OR4F21	O95013	312 aa		4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	MBD3	O95983	291 aa		4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	IGFBP1	P08833	259 aa	Predicted RBP	4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	RHOXF2B	P0C7M4	288 aa		4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	GLRA2	P23416	452 aa		4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	DPP4	P27487	766 aa		4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	ARHGDIB	P52566	201 aa		4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	BLVRA	P53004	296 aa		4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	RPS6	P62753	249 aa	Known RBP	4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	CTAG1A	P78358	180 aa		4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	IL9R	Q01113	521 aa		4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	RUNX3	Q13761	415 aa		4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	MICA	Q29983	383 aa		4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	TMEM52B	Q4KMG9	183 aa		4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	LCE1E	Q5T753	118 aa		4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	ANGPTL8	Q6UXH0	198 aa		4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	CTAGE6	Q86UF2	777 aa		4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	CBWD2	Q8IUF1	395 aa		4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	OR52M1	Q8NGK5	317 aa		4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	AGAP11	Q8TF27	550 aa		4.17	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms