RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 SF3B4Q15427 424 aaKnown RBP eCLIP13.95□□□□□ -0.183e-9■■■■■ 61.8
RABGGTA-219ENST00000560871 CYP51A1Q16850 503 aa13.95□□□□□ -0.18
RABGGTA-219ENST00000560871 CTU2Q2VPK5 515 aaKnown RBP13.95□□□□□ -0.18
RABGGTA-219ENST00000560871 RABL3Q5HYI8 236 aa13.95□□□□□ -0.18
RABGGTA-219ENST00000560871 REEP3Q6NUK4 255 aa13.95□□□□□ -0.18
RABGGTA-219ENST00000560871 CALHM3Q86XJ0 350 aa13.95□□□□□ -0.18
RABGGTA-219ENST00000560871 MCEMP1Q8IX19 187 aa13.95□□□□□ -0.18
RABGGTA-219ENST00000560871 ZZZ3Q8IYH5 903 aa13.95□□□□□ -0.18
RABGGTA-219ENST00000560871 UBQLNLQ8IYU4 475 aa13.95□□□□□ -0.18
RABGGTA-219ENST00000560871 MEIOBQ8N635 442 aa13.95□□□□□ -0.18
RABGGTA-219ENST00000560871 NAXEQ8NCW5 288 aa13.95□□□□□ -0.18
RABGGTA-219ENST00000560871 HIPK4Q8NE63 616 aa13.95□□□□□ -0.18
RABGGTA-219ENST00000560871 SMPDL3BQ92485 455 aa13.95□□□□□ -0.18
RABGGTA-219ENST00000560871 SDCCAG3Q96C92 435 aa13.95□□□□□ -0.18
RABGGTA-219ENST00000560871 SPATA9Q9BWV2 254 aa13.95□□□□□ -0.18
RABGGTA-219ENST00000560871 CALHM2Q9HA72 323 aa13.95□□□□□ -0.18
RABGGTA-219ENST00000560871 RLIMQ9NVW2 624 aa13.95□□□□□ -0.18
RABGGTA-219ENST00000560871 COQ3Q9NZJ6 369 aa13.95□□□□□ -0.18
RABGGTA-219ENST00000560871 Q9UFV3 132 aa13.95□□□□□ -0.18
RABGGTA-219ENST00000560871 IFT52Q9Y366 437 aa13.95□□□□□ -0.18
RABGGTA-219ENST00000560871 CENPEQ02224 2701 aa13.95□□□□□ -0.18
RABGGTA-219ENST00000560871 FAAHO00519 579 aa13.94□□□□□ -0.18
RABGGTA-219ENST00000560871 SLC6A2P23975 617 aa13.94□□□□□ -0.18
RABGGTA-219ENST00000560871 SHC1P29353 583 aa13.94□□□□□ -0.18
RABGGTA-219ENST00000560871 SLC6A8P48029 635 aa13.94□□□□□ -0.18
RABGGTA-219ENST00000560871 SESN3P58005 492 aa13.94□□□□□ -0.18
RABGGTA-219ENST00000560871 EPS8Q12929 822 aa13.94□□□□□ -0.18
RABGGTA-219ENST00000560871 SELENBP1Q13228 472 aa13.94□□□□□ -0.18
RABGGTA-219ENST00000560871 C8orf82Q6P1X6 216 aaPredicted RBP13.94□□□□□ -0.18
RABGGTA-219ENST00000560871 PLXDC2Q6UX71 529 aa13.94□□□□□ -0.18
RABGGTA-219ENST00000560871 CCDC71Q8IV32 467 aaPredicted RBP13.94□□□□□ -0.18
RABGGTA-219ENST00000560871 CLIP4Q8N3C7 705 aa13.94□□□□□ -0.18
RABGGTA-219ENST00000560871 C9orf106Q8NAJ2 232 aa13.94□□□□□ -0.18
RABGGTA-219ENST00000560871 C11orf65Q8NCR3 313 aa13.94□□□□□ -0.18
RABGGTA-219ENST00000560871 TNIP2Q8NFZ5 429 aa13.94□□□□□ -0.18
RABGGTA-219ENST00000560871 OR10A6Q8NH74 314 aa13.94□□□□□ -0.18
RABGGTA-219ENST00000560871 CA5BP1Q8WTZ4 195 aa13.94□□□□□ -0.18
RABGGTA-219ENST00000560871 ASB5Q8WWX0 329 aa13.94□□□□□ -0.18
RABGGTA-219ENST00000560871 GPATCH1Q9BRR8 931 aaKnown RBP13.94□□□□□ -0.18
RABGGTA-219ENST00000560871 TMEM185BQ9H7F4 350 aa13.94□□□□□ -0.18
RABGGTA-219ENST00000560871 ACER3Q9NUN7 267 aa13.94□□□□□ -0.18
RABGGTA-219ENST00000560871 GID8Q9NWU2 228 aa13.94□□□□□ -0.18
RABGGTA-219ENST00000560871 ANGPT4Q9Y264 503 aa13.94□□□□□ -0.18
RABGGTA-219ENST00000560871 ARL2BPQ9Y2Y0 163 aa13.94□□□□□ -0.18
RABGGTA-219ENST00000560871 ADGRG4Q8IZF6 3080 aa13.94□□□□□ -0.18
RABGGTA-219ENST00000560871 MED12Q93074 2177 aa13.93□□□□□ -0.18
RABGGTA-219ENST00000560871 GCM2O75603 506 aaPredicted RBP13.93□□□□□ -0.18
RABGGTA-219ENST00000560871 COX6B1P14854 86 aa13.93□□□□□ -0.18
RABGGTA-219ENST00000560871 PRDX6P30041 224 aa13.93□□□□□ -0.18
RABGGTA-219ENST00000560871 CHRNB4P30926 498 aa13.93□□□□□ -0.18
RABGGTA-219ENST00000560871 PRKAR1BP31321 381 aa13.93□□□□□ -0.18
RABGGTA-219ENST00000560871 RYKP34925 604 aa13.93□□□□□ -0.18
RABGGTA-219ENST00000560871 PCGF2P35227 344 aa13.93□□□□□ -0.18
RABGGTA-219ENST00000560871 ACAA2P42765 397 aaKnown RBP13.93□□□□□ -0.18
RABGGTA-219ENST00000560871 EEFSECP57772 596 aaKnown RBP13.93□□□□□ -0.18
RABGGTA-219ENST00000560871 LARS2Q15031 903 aaKnown RBP13.93□□□□□ -0.18
RABGGTA-219ENST00000560871 ZSWIM7Q19AV6 140 aa13.93□□□□□ -0.18
RABGGTA-219ENST00000560871 ZNF311Q5JNZ3 666 aa13.93□□□□□ -0.18
RABGGTA-219ENST00000560871 DHRS4L2Q6PKH6 230 aa13.93□□□□□ -0.18
RABGGTA-219ENST00000560871 ESPNLQ6ZVH7 1005 aa13.93□□□□□ -0.18
RABGGTA-219ENST00000560871 PLEKHM3Q6ZWE6 761 aa13.93□□□□□ -0.18
RABGGTA-219ENST00000560871 COMTD1Q86VU5 262 aa13.93□□□□□ -0.18
RABGGTA-219ENST00000560871 LURAP1LQ8IV03 231 aa13.93□□□□□ -0.18
RABGGTA-219ENST00000560871 ACBD4Q8NC06 268 aa13.93□□□□□ -0.18
RABGGTA-219ENST00000560871 TMEM234Q8WY98 164 aa13.93□□□□□ -0.18
RABGGTA-219ENST00000560871 ZNF845Q96IR2 970 aaPredicted RBP13.93□□□□□ -0.18
RABGGTA-219ENST00000560871 KLHL15Q96M94 604 aa13.93□□□□□ -0.18
RABGGTA-219ENST00000560871 CCT8L2Q96SF2 557 aa13.93□□□□□ -0.18
RABGGTA-219ENST00000560871 SH3GL1Q99961 368 aa13.93□□□□□ -0.18
RABGGTA-219ENST00000560871 COQ10BQ9H8M1 238 aa13.93□□□□□ -0.18
RABGGTA-219ENST00000560871 A0A0J9YW62 118 aa13.92□□□□□ -0.18
RABGGTA-219ENST00000560871 CFAP73A6NFT4 308 aa13.92□□□□□ -0.18
RABGGTA-219ENST00000560871 EIF1AYO14602 144 aaKnown RBP13.92□□□□□ -0.18
RABGGTA-219ENST00000560871 ADAMDEC1O15204 470 aa13.92□□□□□ -0.18
RABGGTA-219ENST00000560871 TGM6O95932 706 aa13.92□□□□□ -0.18
RABGGTA-219ENST00000560871 FAM107AO95990 144 aa13.92□□□□□ -0.18
RABGGTA-219ENST00000560871 PRG2P13727 222 aa13.92□□□□□ -0.18
RABGGTA-219ENST00000560871 AQP1P29972 269 aa13.92□□□□□ -0.18
RABGGTA-219ENST00000560871 ZNF136P52737 540 aa13.92□□□□□ -0.18
RABGGTA-219ENST00000560871 RPS3AP61247 264 aaKnown RBP13.92□□□□□ -0.18
RABGGTA-219ENST00000560871 VMACQ2NL98 169 aa13.92□□□□□ -0.18
RABGGTA-219ENST00000560871 GLIPR1L2Q4G1C9 344 aa13.92□□□□□ -0.18
RABGGTA-219ENST00000560871 FAM91A1Q658Y4 838 aa13.92□□□□□ -0.18
RABGGTA-219ENST00000560871 C3orf33Q6P1S2 294 aa13.92□□□□□ -0.18
RABGGTA-219ENST00000560871 POMZP3Q6PJE2 187 aa13.92□□□□□ -0.18
RABGGTA-219ENST00000560871 HACD2Q6Y1H2 254 aa13.92□□□□□ -0.18
RABGGTA-219ENST00000560871 GRINAQ7Z429 371 aa13.92□□□□□ -0.18
RABGGTA-219ENST00000560871 KRT73Q86Y46 540 aa13.92□□□□□ -0.18
RABGGTA-219ENST00000560871 LIX1LQ8IVB5 337 aa13.92□□□□□ -0.18
RABGGTA-219ENST00000560871 ZNF440Q8IYI8 595 aa13.92□□□□□ -0.18
RABGGTA-219ENST00000560871 LILRA2Q8N149 483 aa13.92□□□□□ -0.18
RABGGTA-219ENST00000560871 ANKS4BQ8N8V4 417 aa13.92□□□□□ -0.18
RABGGTA-219ENST00000560871 OR10D3Q8NH80 312 aa13.92□□□□□ -0.18
RABGGTA-219ENST00000560871 LILRB4Q8NHJ6 448 aa13.92□□□□□ -0.18
RABGGTA-219ENST00000560871 ZNF563Q8TA94 476 aa13.92□□□□□ -0.18
RABGGTA-219ENST00000560871 FIG4Q92562 907 aa13.92□□□□□ -0.18
RABGGTA-219ENST00000560871 WNT2BQ93097 391 aa13.92□□□□□ -0.18
RABGGTA-219ENST00000560871 SLC35B4Q969S0 331 aa13.92□□□□□ -0.18
RABGGTA-219ENST00000560871 REXO5Q96IC2 774 aaKnown RBP13.92□□□□□ -0.18
RABGGTA-219ENST00000560871 SPATA5L1Q9BVQ7 753 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms