RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 HSMCR30P0CW71 290 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 C1GALT1C1LP0DN25 315 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 ACP2P11117 423 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 ACADMP11310 421 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 GALP22466 123 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 CFL1P23528 166 aaKnown RBP2.28□□□□□ -2.04
SPG11-223ENST00000560858 AZGP1P25311 298 aaKnown RBP2.28□□□□□ -2.04
SPG11-223ENST00000560858 PSMA1P25786 263 aaKnown RBP2.28□□□□□ -2.04
SPG11-223ENST00000560858 HLA-DMAP28067 261 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 ERP29P30040 261 aaKnown RBP2.28□□□□□ -2.04
SPG11-223ENST00000560858 GABRA5P31644 462 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 SDC2P34741 201 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 SOAT1P35610 550 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 BSGP35613 385 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 CHI3L1P36222 383 aaPredicted RBP2.28□□□□□ -2.04
SPG11-223ENST00000560858 CRATP43155 626 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 OR1E2P47887 323 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 TM4SF4P48230 202 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 RORCP51449 518 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 XKP51811 444 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 ARFIP1P53367 373 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 CTSCP53634 463 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 WNT4P56705 351 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 CLDN20P56880 219 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 SMIM11AP58511 58 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 GNG2P59768 71 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 WDR5P61964 334 aaKnown RBP2.28□□□□□ -2.04
SPG11-223ENST00000560858 RPS25P62851 125 aaKnown RBP2.28□□□□□ -2.04
SPG11-223ENST00000560858 POLR2LP62875 67 aaKnown RBP2.28□□□□□ -2.04
SPG11-223ENST00000560858 PPP3R1P63098 170 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 MRPS15P82914 257 aaKnown RBP2.28□□□□□ -2.04
SPG11-223ENST00000560858 CDK5Q00535 292 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 REEP5Q00765 189 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 GALK2Q01415 458 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 MC1RQ01726 317 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 BDH1Q02338 343 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 RUNX1T1Q06455 604 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 SCN1BQ07699 218 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 ACSM1Q08AH1 577 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 COX10Q12887 443 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 DDX39BQ13838 428 aaKnown RBP2.28□□□□□ -2.04
SPG11-223ENST00000560858 C1DQ13901 141 aaKnown RBP2.28□□□□□ -2.04
SPG11-223ENST00000560858 EFR3AQ14156 821 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 GANABQ14697 944 aaKnown RBP2.28□□□□□ -2.04
SPG11-223ENST00000560858 HEPACAMQ14CZ8 416 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 MLC1Q15049 377 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 NCF4Q15080 339 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 MED22Q15528 200 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 CARTPTQ16568 116 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 BAK1Q16611 211 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 TMEM44Q2T9K0 475 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 C3orf36Q3SXR2 165 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 TBRG1Q3YBR2 411 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 PLK5Q496M5 336 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 MINDY4Q4G0A6 757 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 CCSMST1Q4G0I0 132 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 SYTL3Q4VX76 610 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 GPAT3Q53EU6 434 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 SYT14P1Q58G82 188 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 AWAT1Q58HT5 328 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 Q5BKY6 102 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 ENTPD8Q5MY95 495 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 ARMC4Q5T2S8 1044 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 C6orf183Q5T699 404 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 DDI2Q5TDH0 399 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 PRAMEF8Q5VWM4 474 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 PRAMEF7Q5VXH5 474 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 TXNDC8Q6A555 127 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 LCTLQ6UWM7 567 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 CEACAM20Q6UY09 585 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 SLC36A4Q6YBV0 504 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 TMEM64Q6YI46 380 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 HSDL2Q6YN16 418 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 ZNF730Q6ZMV8 503 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 ZNF793Q6ZN11 406 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 FAM83HQ6ZRV2 1179 aaPredicted RBP2.28□□□□□ -2.04
SPG11-223ENST00000560858 PTCHD4Q6ZW05 846 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 HSD11B1LQ7Z5J1 315 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 NRARPQ7Z6K4 114 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 SLC9B2Q86UD5 537 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 NOXA1Q86UR1 476 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 COMTD1Q86VU5 262 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 FAM90A1Q86YD7 464 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 PLCZ1Q86YW0 608 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 PEX5LQ8IYB4 626 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 IZUMO1Q8IYV9 350 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 NRSN1Q8IZ57 195 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 ADGRF3Q8IZF5 1079 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 SLC7A5P1Q8MH63 180 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 SPEM1Q8N4L4 309 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 HORMAD2Q8N7B1 307 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 ARIH2OSQ8N7S6 290 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 ZNF557Q8N988 423 aaPredicted RBP2.28□□□□□ -2.04
SPG11-223ENST00000560858 RASGEF1AQ8N9B8 481 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 POGLUT1Q8NBL1 392 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 MORN4Q8NDC4 146 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 DUSP18Q8NEJ0 188 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 VN1R2Q8NFZ6 395 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 OR4K1Q8NGD4 311 aa2.28□□□□□ -2.04
SPG11-223ENST00000560858 OR4D11Q8NGI4 311 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms