RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 NINQ8N4C6 2090 aa11.82□□□□□ -0.52
SNX1-211ENST00000560829 EFCAB9A8MZ26 197 aa11.82□□□□□ -0.52
SNX1-211ENST00000560829 KDM4EB2RXH2 506 aaPredicted RBP11.82□□□□□ -0.52
SNX1-211ENST00000560829 GTPBP1O00178 669 aaKnown RBP11.82□□□□□ -0.52
SNX1-211ENST00000560829 KPNA4O00629 521 aaPredicted RBP11.82□□□□□ -0.52
SNX1-211ENST00000560829 PRODHO43272 600 aa11.82□□□□□ -0.52
SNX1-211ENST00000560829 FADS1O60427 444 aa11.82□□□□□ -0.52
SNX1-211ENST00000560829 HMGN1P05114 100 aa11.82□□□□□ -0.52
SNX1-211ENST00000560829 DBTP11182 482 aaKnown RBP11.82□□□□□ -0.52
SNX1-211ENST00000560829 PTNP21246 168 aa11.82□□□□□ -0.52
SNX1-211ENST00000560829 ST13P50502 369 aaKnown RBP11.82□□□□□ -0.52
SNX1-211ENST00000560829 NRG3P56975 720 aa11.82□□□□□ -0.52
SNX1-211ENST00000560829 SLC26A5P58743 744 aa11.82□□□□□ -0.52
SNX1-211ENST00000560829 TMEM44Q2T9K0 475 aa11.82□□□□□ -0.52
SNX1-211ENST00000560829 CBLN3Q6UW01 205 aa11.82□□□□□ -0.52
SNX1-211ENST00000560829 ATG4DQ86TL0 474 aaPredicted RBP11.82□□□□□ -0.52
SNX1-211ENST00000560829 NAXDQ8IW45 347 aa11.82□□□□□ -0.52
SNX1-211ENST00000560829 CYP4Z2PQ8N1L4 340 aa11.82□□□□□ -0.52
SNX1-211ENST00000560829 GATSQ8NAP1 163 aa11.82□□□□□ -0.52
SNX1-211ENST00000560829 FANK1Q8TC84 345 aa11.82□□□□□ -0.52
SNX1-211ENST00000560829 PMEPA1Q969W9 287 aa11.82□□□□□ -0.52
SNX1-211ENST00000560829 YIPF6Q96EC8 236 aa11.82□□□□□ -0.52
SNX1-211ENST00000560829 CRELD1Q96HD1 420 aa11.82□□□□□ -0.52
SNX1-211ENST00000560829 SAMD8Q96LT4 415 aa11.82□□□□□ -0.52
SNX1-211ENST00000560829 FUNDC2Q9BWH2 189 aa11.82□□□□□ -0.52
SNX1-211ENST00000560829 GPN2Q9H9Y4 310 aaPredicted RBP11.82□□□□□ -0.52
SNX1-211ENST00000560829 C12orf10Q9HB07 376 aa11.82□□□□□ -0.52
SNX1-211ENST00000560829 SLC39A1Q9NY26 324 aa11.82□□□□□ -0.52
SNX1-211ENST00000560829 WARS2Q9UGM6 360 aaKnown RBP11.82□□□□□ -0.52
SNX1-211ENST00000560829 FRYLO94915 3013 aa11.81□□□□□ -0.52
SNX1-211ENST00000560829 TMEM200CA6NKL6 621 aa11.81□□□□□ -0.52
SNX1-211ENST00000560829 SNTNA6NMZ2 147 aa11.81□□□□□ -0.52
SNX1-211ENST00000560829 TMX2-CTNND1H3BSU7 103 aa11.81□□□□□ -0.52
SNX1-211ENST00000560829 BHLHE40O14503 412 aa11.81□□□□□ -0.52
SNX1-211ENST00000560829 HCN1O60741 890 aa11.81□□□□□ -0.52
SNX1-211ENST00000560829 NOL3O60936 208 aaKnown RBP11.81□□□□□ -0.52
SNX1-211ENST00000560829 PPM1BO75688 479 aa11.81□□□□□ -0.52
SNX1-211ENST00000560829 LCKP06239 509 aa11.81□□□□□ -0.52
SNX1-211ENST00000560829 PNMTP11086 282 aa11.81□□□□□ -0.52
SNX1-211ENST00000560829 NAGAP17050 411 aa11.81□□□□□ -0.52
SNX1-211ENST00000560829 BMP7P18075 431 aa11.81□□□□□ -0.52
SNX1-211ENST00000560829 GRK5P34947 590 aa11.81□□□□□ -0.52
SNX1-211ENST00000560829 RAB15P59190 212 aa11.81□□□□□ -0.52
SNX1-211ENST00000560829 E2F1Q01094 437 aa11.81□□□□□ -0.52
SNX1-211ENST00000560829 EFR3AQ14156 821 aa11.81□□□□□ -0.52
SNX1-211ENST00000560829 AADACL4Q5VUY2 407 aa11.81□□□□□ -0.52
SNX1-211ENST00000560829 DESI1Q6ICB0 168 aa11.81□□□□□ -0.52
SNX1-211ENST00000560829 SMARCD3Q6STE5 483 aa11.81□□□□□ -0.52
SNX1-211ENST00000560829 SLC16A12Q6ZSM3 486 aa11.81□□□□□ -0.52
SNX1-211ENST00000560829 LNX2Q8N448 690 aa11.81□□□□□ -0.52
SNX1-211ENST00000560829 OR52L1Q8NGH7 329 aa11.81□□□□□ -0.52
SNX1-211ENST00000560829 OR5L2Q8NGL0 311 aa11.81□□□□□ -0.52
SNX1-211ENST00000560829 ULBP3Q9BZM4 244 aa11.81□□□□□ -0.52
SNX1-211ENST00000560829 RTN4RQ9BZR6 473 aa11.81□□□□□ -0.52
SNX1-211ENST00000560829 GPN3Q9UHW5 284 aaPredicted RBP11.81□□□□□ -0.52
SNX1-211ENST00000560829 ENPP5Q9UJA9 477 aa11.81□□□□□ -0.52
SNX1-211ENST00000560829 NPFFR2Q9Y5X5 522 aa11.81□□□□□ -0.52
SNX1-211ENST00000560829 NCOR1O75376 2440 aa11.81□□□□□ -0.52
SNX1-211ENST00000560829 ENO4A6NNW6 628 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 C9J4A7 227 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 ADAM10O14672 748 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 NDUFB5O43674 189 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 AHCYL1O43865 530 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 KLF7O75840 302 aaPredicted RBP11.8□□□□□ -0.52
SNX1-211ENST00000560829 GABARAPO95166 117 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 ATE1O95260 518 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 ADRA2AP08913 450 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 ADORA3P0DMS8 318 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 SAGP10523 405 aaPredicted RBP11.8□□□□□ -0.52
SNX1-211ENST00000560829 FUT1P19526 365 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 MST1P26927 711 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 PSMB9P28065 219 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 ZNF117Q03924 483 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 CRYZQ08257 329 aaKnown RBP11.8□□□□□ -0.52
SNX1-211ENST00000560829 FHL1Q13642 323 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 SF3A2Q15428 464 aaKnown RBP11.8□□□□□ -0.52
SNX1-211ENST00000560829 BCDIN3DQ7Z5W3 292 aaKnown RBP11.8□□□□□ -0.52
SNX1-211ENST00000560829 GALNT15Q8N3T1 639 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 OR13C2Q8NGS9 318 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 RNF138Q8WVD3 245 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 MR1Q95460 341 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 TMEM80Q96HE8 168 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 ZPBPQ9BS86 351 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 TMEM43Q9BTV4 400 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 TBL1XR1Q9BZK7 514 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 ADAM19Q9H013 955 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 FN3KQ9H479 309 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 LIN28AQ9H9Z2 209 aaKnown RBP11.8□□□□□ -0.52
SNX1-211ENST00000560829 WDFY4Q6ZS81 3184 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 IGKV1D-42A0A075B6H8 117 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 TRBV11-1A0A0K0K1C0 115 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 IRGMA1A4Y4 181 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 MAN1A2O60476 641 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 NADKO95544 446 aaPredicted RBP11.8□□□□□ -0.52
SNX1-211ENST00000560829 PTHP01270 115 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 EVI2BP34910 448 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 SLC1A3P43003 542 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 SLC9A3P48764 834 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 GAS1P54826 345 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 PCOLCEQ15113 449 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms