RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 XAGE5Q8WWM1 108 aa12.57□□□□□ -0.4
TPM1-223ENST00000560445 ROPN1LQ96C74 230 aa12.57□□□□□ -0.4
TPM1-223ENST00000560445 CCDC115Q96NT0 180 aa12.57□□□□□ -0.4
TPM1-223ENST00000560445 PANX1Q96RD7 426 aa12.57□□□□□ -0.4
TPM1-223ENST00000560445 SORT1Q99523 831 aa12.57□□□□□ -0.4
TPM1-223ENST00000560445 SLC35A5Q9BS91 424 aa12.57□□□□□ -0.4
TPM1-223ENST00000560445 CXorf56Q9H5V9 222 aa12.57□□□□□ -0.4
TPM1-223ENST00000560445 ESRP2Q9H6T0 727 aaKnown RBP12.57□□□□□ -0.4
TPM1-223ENST00000560445 EXOSC3Q9NQT5 275 aaKnown RBP12.57□□□□□ -0.4
TPM1-223ENST00000560445 THUMPD1Q9NXG2 353 aaKnown RBP12.57□□□□□ -0.4
TPM1-223ENST00000560445 TMEM247A6NEH6 219 aa12.56□□□□□ -0.4
TPM1-223ENST00000560445 GPR171O14626 319 aa12.56□□□□□ -0.4
TPM1-223ENST00000560445 DNAJA2O60884 412 aa12.56□□□□□ -0.4
TPM1-223ENST00000560445 KRT75O95678 551 aa12.56□□□□□ -0.4
TPM1-223ENST00000560445 OPN1LWP04000 364 aa12.56□□□□□ -0.4
TPM1-223ENST00000560445 IL6P05231 212 aa12.56□□□□□ -0.4
TPM1-223ENST00000560445 UBTFL6P0CB48 400 aaPredicted RBP12.56□□□□□ -0.4
TPM1-223ENST00000560445 BST1Q10588 318 aa12.56□□□□□ -0.4
TPM1-223ENST00000560445 MERTKQ12866 999 aa12.56□□□□□ -0.4
TPM1-223ENST00000560445 ZSWIM7Q19AV6 140 aa12.56□□□□□ -0.4
TPM1-223ENST00000560445 TIGD2Q4W5G0 525 aa12.56□□□□□ -0.4
TPM1-223ENST00000560445 GPAT3Q53EU6 434 aa12.56□□□□□ -0.4
TPM1-223ENST00000560445 SPANXN4Q5MJ08 99 aa12.56□□□□□ -0.4
TPM1-223ENST00000560445 AP1ARQ63HQ0 302 aa12.56□□□□□ -0.4
TPM1-223ENST00000560445 PLEKHM3Q6ZWE6 761 aa12.56□□□□□ -0.4
TPM1-223ENST00000560445 ANKRD46Q86W74 232 aa12.56□□□□□ -0.4
TPM1-223ENST00000560445 ARFGAP2Q8N6H7 521 aa12.56□□□□□ -0.4
TPM1-223ENST00000560445 ATP6V1C2Q8NEY4 427 aa12.56□□□□□ -0.4
TPM1-223ENST00000560445 ABHD3Q8WU67 409 aa12.56□□□□□ -0.4
TPM1-223ENST00000560445 TMEM171Q8WVE6 324 aa12.56□□□□□ -0.4
TPM1-223ENST00000560445 HSD17B8Q92506 261 aa12.56□□□□□ -0.4
TPM1-223ENST00000560445 KISS1RQ969F8 398 aaPredicted RBP12.56□□□□□ -0.4
TPM1-223ENST00000560445 TRNT1Q96Q11 434 aaKnown RBP12.56□□□□□ -0.4
TPM1-223ENST00000560445 OR5B2Q96R09 309 aa12.56□□□□□ -0.4
TPM1-223ENST00000560445 THUMPD3Q9BV44 507 aaKnown RBP12.56□□□□□ -0.4
TPM1-223ENST00000560445 POTEKPQ9BYX7 375 aa12.56□□□□□ -0.4
TPM1-223ENST00000560445 SAP130Q9H0E3 1048 aa12.56□□□□□ -0.4
TPM1-223ENST00000560445 C12orf49Q9H741 205 aa12.56□□□□□ -0.4
TPM1-223ENST00000560445 RMND5AQ9H871 391 aa12.56□□□□□ -0.4
TPM1-223ENST00000560445 BCO1Q9HAY6 547 aa12.56□□□□□ -0.4
TPM1-223ENST00000560445 ACER3Q9NUN7 267 aa12.56□□□□□ -0.4
TPM1-223ENST00000560445 AIG1Q9NVV5 245 aa12.56□□□□□ -0.4
TPM1-223ENST00000560445 CALML5Q9NZT1 146 aa12.56□□□□□ -0.4
TPM1-223ENST00000560445 MKLN1Q9UL63 735 aa12.56□□□□□ -0.4
TPM1-223ENST00000560445 KCNE3Q9Y6H6 103 aa12.56□□□□□ -0.4
TPM1-223ENST00000560445 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.55□□□□□ -0.4
TPM1-223ENST00000560445 TMEM120BA0PK00 339 aa12.55□□□□□ -0.4
TPM1-223ENST00000560445 ZNF724A8MTY0 619 aa12.55□□□□□ -0.4
TPM1-223ENST00000560445 UGT2B17O75795 530 aa12.55□□□□□ -0.4
TPM1-223ENST00000560445 PGRP06401 933 aa12.55□□□□□ -0.4
TPM1-223ENST00000560445 OR12D1P0DN82 309 aa12.55□□□□□ -0.4
TPM1-223ENST00000560445 ADSLP30566 484 aaPredicted RBP12.55□□□□□ -0.4
TPM1-223ENST00000560445 HOXC12P31275 282 aa12.55□□□□□ -0.4
TPM1-223ENST00000560445 RASGEF1BQ0VAM2 473 aa12.55□□□□□ -0.4
TPM1-223ENST00000560445 MPP2Q14168 576 aa12.55□□□□□ -0.4
TPM1-223ENST00000560445 KRTAP21-3Q3LHN1 58 aa12.55□□□□□ -0.4
TPM1-223ENST00000560445 SYT14P1Q58G82 188 aa12.55□□□□□ -0.4
TPM1-223ENST00000560445 TNFAIP8L2Q6P589 184 aaPredicted RBP12.55□□□□□ -0.4
TPM1-223ENST00000560445 TFAP2EQ6VUC0 442 aa12.55□□□□□ -0.4
TPM1-223ENST00000560445 MSANTD1Q6ZTZ1 278 aa12.55□□□□□ -0.4
TPM1-223ENST00000560445 GRINAQ7Z429 371 aa12.55□□□□□ -0.4
TPM1-223ENST00000560445 WFDC8Q8IUA0 241 aa12.55□□□□□ -0.4
TPM1-223ENST00000560445 ZNF440Q8IYI8 595 aa12.55□□□□□ -0.4
TPM1-223ENST00000560445 ROBO4Q8WZ75 1007 aa12.55□□□□□ -0.4
TPM1-223ENST00000560445 ZBTB9Q96C00 473 aa12.55□□□□□ -0.4
TPM1-223ENST00000560445 C18orf12Q96KH6 178 aa12.55□□□□□ -0.4
TPM1-223ENST00000560445 OR52E6Q96RD3 313 aa12.55□□□□□ -0.4
TPM1-223ENST00000560445 BDH2Q9BUT1 245 aa12.55□□□□□ -0.4
TPM1-223ENST00000560445 ARMC7Q9H6L4 198 aa12.55□□□□□ -0.4
TPM1-223ENST00000560445 CHRNA9Q9UGM1 479 aa12.55□□□□□ -0.4
TPM1-223ENST00000560445 HDGFL3Q9Y3E1 203 aa12.55□□□□□ -0.4
TPM1-223ENST00000560445 CCDC154A6NI56 674 aa12.54□□□□□ -0.4
TPM1-223ENST00000560445 SULT2B1O00204 365 aa12.54□□□□□ -0.4
TPM1-223ENST00000560445 OIP5O43482 229 aa12.54□□□□□ -0.4
TPM1-223ENST00000560445 FCMRO60667 390 aa12.54□□□□□ -0.4
TPM1-223ENST00000560445 CYTIPO60759 359 aa12.54□□□□□ -0.4
TPM1-223ENST00000560445 SCN2BO60939 215 aa12.54□□□□□ -0.4
TPM1-223ENST00000560445 TFPIP10646 304 aa12.54□□□□□ -0.4
TPM1-223ENST00000560445 SESN3P58005 492 aa12.54□□□□□ -0.4
TPM1-223ENST00000560445 ITGADQ13349 1161 aa12.54□□□□□ -0.4
TPM1-223ENST00000560445 PDK3Q15120 406 aa12.54□□□□□ -0.4
TPM1-223ENST00000560445 GSTA3Q16772 222 aa12.54□□□□□ -0.4
TPM1-223ENST00000560445 Q5PR19 223 aa12.54□□□□□ -0.4
TPM1-223ENST00000560445 SFRP5Q5T4F7 317 aa12.54□□□□□ -0.4
TPM1-223ENST00000560445 C1QTNF12Q5T7M4 302 aa12.54□□□□□ -0.4
TPM1-223ENST00000560445 ANKRD34AQ69YU3 496 aa12.54□□□□□ -0.4
TPM1-223ENST00000560445 NXNQ6DKJ4 435 aa12.54□□□□□ -0.4
TPM1-223ENST00000560445 TYW3Q6IPR3 259 aaKnown RBP12.54□□□□□ -0.4
TPM1-223ENST00000560445 ZNF704Q6ZNC4 412 aaPredicted RBP12.54□□□□□ -0.4
TPM1-223ENST00000560445 TMPPEQ6ZT21 453 aa12.54□□□□□ -0.4
TPM1-223ENST00000560445 Q6ZT83 130 aa12.54□□□□□ -0.4
TPM1-223ENST00000560445 GALNT5Q7Z7M9 940 aa12.54□□□□□ -0.4
TPM1-223ENST00000560445 P2RY8Q86VZ1 359 aa12.54□□□□□ -0.4
TPM1-223ENST00000560445 CXorf67Q86X51 503 aaPredicted RBP12.54□□□□□ -0.4
TPM1-223ENST00000560445 TUSC5Q8IXB3 177 aa12.54□□□□□ -0.4
TPM1-223ENST00000560445 FAM71CQ8NEG0 241 aa12.54□□□□□ -0.4
TPM1-223ENST00000560445 PIGXQ8TBF5 258 aa12.54□□□□□ -0.4
TPM1-223ENST00000560445 MUCL1Q96DR8 90 aa12.54□□□□□ -0.4
TPM1-223ENST00000560445 SRXN1Q9BYN0 137 aa12.54□□□□□ -0.4
TPM1-223ENST00000560445 C20orf27Q9GZN8 174 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms