RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 CMIPQ8IY22 773 aa13.6□□□□□ -0.23
SNRPA1-210ENST00000560383 LILRA2Q8N149 483 aa13.6□□□□□ -0.23
SNRPA1-210ENST00000560383 PNPT1Q8TCS8 783 aaKnown RBP13.6□□□□□ -0.23
SNRPA1-210ENST00000560383 ST8SIA1Q92185 356 aa13.6□□□□□ -0.23
SNRPA1-210ENST00000560383 KLHL15Q96M94 604 aa13.6□□□□□ -0.23
SNRPA1-210ENST00000560383 SIKE1Q9BRV8 207 aa13.6□□□□□ -0.23
SNRPA1-210ENST00000560383 THUMPD3Q9BV44 507 aaKnown RBP13.6□□□□□ -0.23
SNRPA1-210ENST00000560383 TMUB1Q9BVT8 246 aa13.6□□□□□ -0.23
SNRPA1-210ENST00000560383 RBM24Q9BX46 236 aaKnown RBP13.6□□□□□ -0.23
SNRPA1-210ENST00000560383 GMEB1Q9Y692 573 aa13.6□□□□□ -0.23
SNRPA1-210ENST00000560383 BCAS1O75363 584 aaPredicted RBP13.59□□□□□ -0.23
SNRPA1-210ENST00000560383 ANP32DO95626 131 aa13.59□□□□□ -0.23
SNRPA1-210ENST00000560383 CGAP01215 116 aa13.59□□□□□ -0.23
SNRPA1-210ENST00000560383 BMP2P12643 396 aa13.59□□□□□ -0.23
SNRPA1-210ENST00000560383 SHC1P29353 583 aa13.59□□□□□ -0.23
SNRPA1-210ENST00000560383 SLC6A8P48029 635 aa13.59□□□□□ -0.23
SNRPA1-210ENST00000560383 SGCBQ16585 318 aa13.59□□□□□ -0.23
SNRPA1-210ENST00000560383 C6orf10Q5SRN2 563 aa13.59□□□□□ -0.23
SNRPA1-210ENST00000560383 PDSS1Q5T2R2 415 aa13.59□□□□□ -0.23
SNRPA1-210ENST00000560383 LRIF1Q5T3J3 769 aa13.59□□□□□ -0.23
SNRPA1-210ENST00000560383 SLC2A7Q6PXP3 512 aa13.59□□□□□ -0.23
SNRPA1-210ENST00000560383 TGIF2LYQ8IUE0 185 aa13.59□□□□□ -0.23
SNRPA1-210ENST00000560383 TMCO5AQ8N6Q1 288 aa13.59□□□□□ -0.23
SNRPA1-210ENST00000560383 RFWD2Q8NHY2 731 aa13.59□□□□□ -0.23
SNRPA1-210ENST00000560383 SPDL1Q96EA4 605 aa13.59□□□□□ -0.23
SNRPA1-210ENST00000560383 DACH2Q96NX9 599 aa13.59□□□□□ -0.23
SNRPA1-210ENST00000560383 QRSL1Q9H0R6 528 aaKnown RBP13.59□□□□□ -0.23
SNRPA1-210ENST00000560383 LIME1Q9H400 295 aa13.59□□□□□ -0.23
SNRPA1-210ENST00000560383 ZNF385DQ9H6B1 395 aa13.59□□□□□ -0.23
SNRPA1-210ENST00000560383 TMEM185BQ9H7F4 350 aa13.59□□□□□ -0.23
SNRPA1-210ENST00000560383 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.59□□□□□ -0.23
SNRPA1-210ENST00000560383 THUMPD1Q9NXG2 353 aaKnown RBP13.59□□□□□ -0.23
SNRPA1-210ENST00000560383 GALNT8Q9NY28 637 aa13.59□□□□□ -0.23
SNRPA1-210ENST00000560383 PCDHB14Q9Y5E9 798 aa13.59□□□□□ -0.23
SNRPA1-210ENST00000560383 DSPPQ9NZW4 1301 aa13.59□□□□□ -0.23
SNRPA1-210ENST00000560383 NIPBLQ6KC79 2804 aaeCLIP13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 A0A096LPI6 279 aa13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 GJE1A6NN92 205 aa13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 TNFSF11O14788 317 aa13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 CXCL13O43927 109 aa13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 OPN1LWP04000 364 aa13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 RAF1P04049 648 aa13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 TFPTP0C1Z6 253 aa13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 UBTFL6P0CB48 400 aaPredicted RBP13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 NR2F1P10589 423 aa13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 CD8BP10966 210 aa13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 ETFAP13804 333 aa13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 PGCP20142 388 aa13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 CPA2P48052 419 aa13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 CCR4P51679 360 aa13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 SESN3P58005 492 aa13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 SELENBP1Q13228 472 aa13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 SQLEQ14534 574 aa13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 HBMQ6B0K9 141 aa13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 VWA1Q6PCB0 445 aa13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 FAM214BQ7L5A3 538 aa13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 BTLAQ7Z6A9 289 aa13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 SLC38A5Q8WUX1 472 aa13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 TMEM234Q8WY98 164 aa13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 OSTF1Q92882 214 aa13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 AURKBQ96GD4 344 aaPredicted RBP13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 COQ10BQ9H8M1 238 aa13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 GLRX2Q9NS18 164 aa13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 ACER3Q9NUN7 267 aa13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 SLC25A37Q9NYZ2 338 aa13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 CALML5Q9NZT1 146 aa13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 CCDC167Q9P0B6 97 aa13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 P2RX2Q9UBL9 471 aa13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 MCTS1Q9ULC4 181 aaKnown RBP13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 PLEKHA6Q9Y2H5 1048 aa13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 ABCA4P78363 2273 aa13.58□□□□□ -0.24
SNRPA1-210ENST00000560383 TRBV5-3A0A0A0MS03 114 aa13.57□□□□□ -0.24
SNRPA1-210ENST00000560383 CLDN24A6NM45 220 aa13.57□□□□□ -0.24
SNRPA1-210ENST00000560383 CLIC1O00299 241 aa13.57□□□□□ -0.24
SNRPA1-210ENST00000560383 ADAM11O75078 769 aa13.57□□□□□ -0.24
SNRPA1-210ENST00000560383 SS18L1O75177 396 aaPredicted RBP13.57□□□□□ -0.24
SNRPA1-210ENST00000560383 SYNGR4O95473 234 aa13.57□□□□□ -0.24
SNRPA1-210ENST00000560383 DBIP07108 87 aaKnown RBP13.57□□□□□ -0.24
SNRPA1-210ENST00000560383 CD99P14209 185 aa13.57□□□□□ -0.24
SNRPA1-210ENST00000560383 SFTPDP35247 375 aa13.57□□□□□ -0.24
SNRPA1-210ENST00000560383 CRATP43155 626 aa13.57□□□□□ -0.24
SNRPA1-210ENST00000560383 CARD18P57730 90 aa13.57□□□□□ -0.24
SNRPA1-210ENST00000560383 DSTNP60981 165 aa13.57□□□□□ -0.24
SNRPA1-210ENST00000560383 FADDQ13158 208 aa13.57□□□□□ -0.24
SNRPA1-210ENST00000560383 RGNQ15493 299 aa13.57□□□□□ -0.24
SNRPA1-210ENST00000560383 TMEM176BQ3YBM2 270 aaPredicted RBP13.57□□□□□ -0.24
SNRPA1-210ENST00000560383 FBXW10Q5XX13 1052 aa13.57□□□□□ -0.24
SNRPA1-210ENST00000560383 LUZP2Q86TE4 346 aa13.57□□□□□ -0.24
SNRPA1-210ENST00000560383 MSRB3Q8IXL7 192 aa13.57□□□□□ -0.24
SNRPA1-210ENST00000560383 CNEP1R1Q8N9A8 125 aa13.57□□□□□ -0.24
SNRPA1-210ENST00000560383 LINC01560Q8TB33 94 aa13.57□□□□□ -0.24
SNRPA1-210ENST00000560383 CNOT9Q92600 299 aaKnown RBP13.57□□□□□ -0.24
SNRPA1-210ENST00000560383 CPNE4Q96A23 557 aaPredicted RBP13.57□□□□□ -0.24
SNRPA1-210ENST00000560383 GMPPAQ96IJ6 420 aaPredicted RBP13.57□□□□□ -0.24
SNRPA1-210ENST00000560383 RAD21L1Q9H4I0 556 aa13.57□□□□□ -0.24
SNRPA1-210ENST00000560383 RABEP2Q9H5N1 569 aa13.57□□□□□ -0.24
SNRPA1-210ENST00000560383 SLAMF8Q9P0V8 285 aa13.57□□□□□ -0.24
SNRPA1-210ENST00000560383 PRDM4Q9UKN5 801 aa13.57□□□□□ -0.24
SNRPA1-210ENST00000560383 FLNAP21333 2647 aaKnown RBP13.57□□□□□ -0.24
SNRPA1-210ENST00000560383 A0A1W2PP18 115 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms