RNA–Protein interactions for RNA: ENST00000560260.5

SNX1-210, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 1,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-210ENST00000560260 H0YC42 278 aa19.65■□□□□ 0.74
SNX1-210ENST00000560260 H3BML4 177 aa19.65■□□□□ 0.74
SNX1-210ENST00000560260 ARPC2O15144 300 aa19.65■□□□□ 0.74
SNX1-210ENST00000560260 SERPINA1P01009 418 aa19.65■□□□□ 0.74
SNX1-210ENST00000560260 TPOP07202 933 aa19.65■□□□□ 0.74
SNX1-210ENST00000560260 SHC1P29353 583 aa19.65■□□□□ 0.74
SNX1-210ENST00000560260 TPD52P55327 224 aaPredicted RBP19.65■□□□□ 0.74
SNX1-210ENST00000560260 CLDN15P56746 228 aa19.65■□□□□ 0.74
SNX1-210ENST00000560260 CLDN18P56856 261 aa19.65■□□□□ 0.74
SNX1-210ENST00000560260 RGS8P57771 180 aaPredicted RBP19.65■□□□□ 0.74
SNX1-210ENST00000560260 RBPJQ06330 500 aa19.65■□□□□ 0.74
SNX1-210ENST00000560260 EIF2S3LQ2VIR3 472 aaKnown RBP19.65■□□□□ 0.74
SNX1-210ENST00000560260 SPATS1Q496A3 300 aa19.65■□□□□ 0.74
SNX1-210ENST00000560260 DNAL1Q4LDG9 190 aa19.65■□□□□ 0.74
SNX1-210ENST00000560260 AAGABQ6PD74 315 aa19.65■□□□□ 0.74
SNX1-210ENST00000560260 CBLL1Q75N03 491 aa19.65■□□□□ 0.74
SNX1-210ENST00000560260 TSPYL5Q86VY4 417 aaPredicted RBP19.65■□□□□ 0.74
SNX1-210ENST00000560260 ARHGAP24Q8N264 748 aa19.65■□□□□ 0.74
SNX1-210ENST00000560260 TNIP2Q8NFZ5 429 aa19.65■□□□□ 0.74
SNX1-210ENST00000560260 OR6T1Q8NGN1 323 aa19.65■□□□□ 0.74
SNX1-210ENST00000560260 VANGL1Q8TAA9 524 aaPredicted RBP19.65■□□□□ 0.74
SNX1-210ENST00000560260 FAM162AQ96A26 154 aa19.65■□□□□ 0.74
SNX1-210ENST00000560260 THTPAQ9BU02 230 aa19.65■□□□□ 0.74
SNX1-210ENST00000560260 PRDM14Q9GZV8 571 aa19.65■□□□□ 0.74
SNX1-210ENST00000560260 TMEM185BQ9H7F4 350 aa19.65■□□□□ 0.74
SNX1-210ENST00000560260 ACAD8Q9UKU7 415 aa19.65■□□□□ 0.74
SNX1-210ENST00000560260 BCKDKO14874 412 aa19.64■□□□□ 0.73
SNX1-210ENST00000560260 GYG2O15488 501 aa19.64■□□□□ 0.73
SNX1-210ENST00000560260 C8BP07358 591 aa19.64■□□□□ 0.73
SNX1-210ENST00000560260 GP1BBP13224 206 aa19.64■□□□□ 0.73
SNX1-210ENST00000560260 ZNF708P17019 499 aa19.64■□□□□ 0.73
SNX1-210ENST00000560260 POU3F2P20265 443 aaPredicted RBP19.64■□□□□ 0.73
SNX1-210ENST00000560260 ATP6V1B2P21281 511 aa19.64■□□□□ 0.73
SNX1-210ENST00000560260 ELK4P28324 431 aa19.64■□□□□ 0.73
SNX1-210ENST00000560260 EIF1P41567 113 aaKnown RBP19.64■□□□□ 0.73
SNX1-210ENST00000560260 CLDN20P56880 219 aa19.64■□□□□ 0.73
SNX1-210ENST00000560260 NCALDP61601 193 aa19.64■□□□□ 0.73
SNX1-210ENST00000560260 GXYLT1Q4G148 440 aa19.64■□□□□ 0.73
SNX1-210ENST00000560260 VTCN1Q7Z7D3 282 aa19.64■□□□□ 0.73
SNX1-210ENST00000560260 GGNQ86UU5 652 aa19.64■□□□□ 0.73
SNX1-210ENST00000560260 DOLPP1Q86YN1 238 aa19.64■□□□□ 0.73
SNX1-210ENST00000560260 CADM2Q8N3J6 435 aa19.64■□□□□ 0.73
SNX1-210ENST00000560260 RASSF5Q8WWW0 418 aa19.64■□□□□ 0.73
SNX1-210ENST00000560260 SMPDL3BQ92485 455 aa19.64■□□□□ 0.73
SNX1-210ENST00000560260 RELTQ969Z4 430 aa19.64■□□□□ 0.73
SNX1-210ENST00000560260 CADM1Q9BY67 442 aaKnown RBP19.64■□□□□ 0.73
SNX1-210ENST00000560260 CTPS2Q9NRF8 586 aa19.64■□□□□ 0.73
SNX1-210ENST00000560260 KLHL28Q9NXS3 571 aa19.64■□□□□ 0.73
SNX1-210ENST00000560260 MAGEL2Q9UJ55 1249 aa19.64■□□□□ 0.73
SNX1-210ENST00000560260 SH3BGRL2Q9UJC5 107 aa19.64■□□□□ 0.73
SNX1-210ENST00000560260 SLC13A4Q9UKG4 626 aa19.64■□□□□ 0.73
SNX1-210ENST00000560260 SNX13Q9Y5W8 968 aa19.64■□□□□ 0.73
SNX1-210ENST00000560260 KDM4EB2RXH2 506 aaPredicted RBP19.63■□□□□ 0.73
SNX1-210ENST00000560260 IFNA14P01570 189 aa19.63■□□□□ 0.73
SNX1-210ENST00000560260 OPN1LWP04000 364 aa19.63■□□□□ 0.73
SNX1-210ENST00000560260 STSP08842 583 aa19.63■□□□□ 0.73
SNX1-210ENST00000560260 PEPDP12955 493 aa19.63■□□□□ 0.73
SNX1-210ENST00000560260 ADH6P28332 368 aa19.63■□□□□ 0.73
SNX1-210ENST00000560260 GCKP35557 465 aa19.63■□□□□ 0.73
SNX1-210ENST00000560260 SLC1A3P43003 542 aa19.63■□□□□ 0.73
SNX1-210ENST00000560260 SUCLG1P53597 346 aaKnown RBP19.63■□□□□ 0.73
SNX1-210ENST00000560260 MERTKQ12866 999 aa19.63■□□□□ 0.73
SNX1-210ENST00000560260 C1QL3Q5VWW1 255 aa19.63■□□□□ 0.73
SNX1-210ENST00000560260 POMZP3Q6PJE2 187 aa19.63■□□□□ 0.73
SNX1-210ENST00000560260 GRINAQ7Z429 371 aa19.63■□□□□ 0.73
SNX1-210ENST00000560260 CARM1Q86X55 608 aa19.63■□□□□ 0.73
SNX1-210ENST00000560260 RPRMLQ8N4K4 120 aa19.63■□□□□ 0.73
SNX1-210ENST00000560260 FAM86B1Q8N7N1 296 aa19.63■□□□□ 0.73
SNX1-210ENST00000560260 TMEM234Q8WY98 164 aa19.63■□□□□ 0.73
SNX1-210ENST00000560260 C3orf49Q96BT1 292 aa19.63■□□□□ 0.73
SNX1-210ENST00000560260 TESQ9UGI8 421 aaKnown RBP19.63■□□□□ 0.73
SNX1-210ENST00000560260 OSGIN1Q9UJX0 560 aa19.63■□□□□ 0.73
SNX1-210ENST00000560260 BAG5Q9UL15 447 aa19.63■□□□□ 0.73
SNX1-210ENST00000560260 CAMK2AQ9UQM7 478 aa19.63■□□□□ 0.73
SNX1-210ENST00000560260 RP1L1Q8IWN7 2480 aaPredicted RBP19.63■□□□□ 0.73
SNX1-210ENST00000560260 SEC14L5O43304 696 aa19.62■□□□□ 0.73
SNX1-210ENST00000560260 ZNF682O95780 498 aa19.62■□□□□ 0.73
SNX1-210ENST00000560260 CPN1P15169 458 aa19.62■□□□□ 0.73
SNX1-210ENST00000560260 ME2P23368 584 aa19.62■□□□□ 0.73
SNX1-210ENST00000560260 TACR3P29371 465 aa19.62■□□□□ 0.73
SNX1-210ENST00000560260 CA7P43166 264 aa19.62■□□□□ 0.73
SNX1-210ENST00000560260 SELENOWP63302 87 aa19.62■□□□□ 0.73
SNX1-210ENST00000560260 MS4A2Q01362 244 aa19.62■□□□□ 0.73
SNX1-210ENST00000560260 BNIP2Q12982 314 aa19.62■□□□□ 0.73
SNX1-210ENST00000560260 CTU2Q2VPK5 515 aaKnown RBP19.62■□□□□ 0.73
SNX1-210ENST00000560260 WLSQ5T9L3 541 aa19.62■□□□□ 0.73
SNX1-210ENST00000560260 PGM2L1Q6PCE3 622 aa19.62■□□□□ 0.73
SNX1-210ENST00000560260 ENPP6Q6UWR7 440 aa19.62■□□□□ 0.73
SNX1-210ENST00000560260 C3P1Q6ZMU1 363 aa19.62■□□□□ 0.73
SNX1-210ENST00000560260 ULK2Q8IYT8 1036 aa19.62■□□□□ 0.73
SNX1-210ENST00000560260 UBQLNLQ8IYU4 475 aa19.62■□□□□ 0.73
SNX1-210ENST00000560260 CCDC124Q96CT7 223 aaKnown RBP19.62■□□□□ 0.73
SNX1-210ENST00000560260 TPD52L3Q96J77 140 aa19.62■□□□□ 0.73
SNX1-210ENST00000560260 HSH2DQ96JZ2 352 aa19.62■□□□□ 0.73
SNX1-210ENST00000560260 ADGRG7Q96K78 797 aa19.62■□□□□ 0.73
SNX1-210ENST00000560260 ADAM19Q9H013 955 aa19.62■□□□□ 0.73
SNX1-210ENST00000560260 GORASP2Q9H8Y8 452 aa19.62■□□□□ 0.73
SNX1-210ENST00000560260 SH3GLB1Q9Y371 365 aa19.62■□□□□ 0.73
SNX1-210ENST00000560260 AP4B1Q9Y6B7 739 aa19.62■□□□□ 0.73
SNX1-210ENST00000560260 ESPL1Q14674 2120 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms