RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 SLC6A5Q9Y345 797 aa13.01□□□□□ -0.33
SMAD6-204ENST00000559931 MRPS18CQ9Y3D5 142 aaKnown RBP13.01□□□□□ -0.33
SMAD6-204ENST00000559931 TNFSF12-TNFSF13A0A0A6YY99 330 aa13□□□□□ -0.33
SMAD6-204ENST00000559931 TRGV5A0A0B4J1U4 118 aa13□□□□□ -0.33
SMAD6-204ENST00000559931 TCRBV5S2A0A599 114 aa13□□□□□ -0.33
SMAD6-204ENST00000559931 CPSF4LA6NMK7 179 aaKnown RBP13□□□□□ -0.33
SMAD6-204ENST00000559931 SHISA8B8ZZ34 492 aa13□□□□□ -0.33
SMAD6-204ENST00000559931 ADAM11O75078 769 aa13□□□□□ -0.33
SMAD6-204ENST00000559931 C1QL1O75973 258 aa13□□□□□ -0.33
SMAD6-204ENST00000559931 PRKCAP17252 672 aa13□□□□□ -0.33
SMAD6-204ENST00000559931 CCNA2P20248 432 aa13□□□□□ -0.33
SMAD6-204ENST00000559931 MST1P26927 711 aa13□□□□□ -0.33
SMAD6-204ENST00000559931 IFNA8P32881 189 aa13□□□□□ -0.33
SMAD6-204ENST00000559931 SLC1A3P43003 542 aa13□□□□□ -0.33
SMAD6-204ENST00000559931 YAP1P46937 504 aaKnown RBP13□□□□□ -0.33
SMAD6-204ENST00000559931 ZNF136P52737 540 aa13□□□□□ -0.33
SMAD6-204ENST00000559931 MLLT10P55197 1068 aa13□□□□□ -0.33
SMAD6-204ENST00000559931 TAS2R41P59536 307 aa13□□□□□ -0.33
SMAD6-204ENST00000559931 FOXK1P85037 733 aa13□□□□□ -0.33
SMAD6-204ENST00000559931 OR1Q1Q15612 314 aa13□□□□□ -0.33
SMAD6-204ENST00000559931 PLPPR5Q32ZL2 321 aa13□□□□□ -0.33
SMAD6-204ENST00000559931 GLYR1Q49A26 553 aaPredicted RBP13□□□□□ -0.33
SMAD6-204ENST00000559931 CMPK2Q5EBM0 449 aa13□□□□□ -0.33
SMAD6-204ENST00000559931 ENTPD8Q5MY95 495 aa13□□□□□ -0.33
SMAD6-204ENST00000559931 PLEKHM3Q6ZWE6 761 aa13□□□□□ -0.33
SMAD6-204ENST00000559931 CYP4Z1Q86W10 505 aa13□□□□□ -0.33
SMAD6-204ENST00000559931 ZNF843Q8N446 348 aa13□□□□□ -0.33
SMAD6-204ENST00000559931 ATP6V1C2Q8NEY4 427 aa13□□□□□ -0.33
SMAD6-204ENST00000559931 OR4D11Q8NGI4 311 aa13□□□□□ -0.33
SMAD6-204ENST00000559931 NR4A3Q92570 626 aa13□□□□□ -0.33
SMAD6-204ENST00000559931 PIGQQ9BRB3 760 aa13□□□□□ -0.33
SMAD6-204ENST00000559931 OR2B2Q9GZK3 357 aa13□□□□□ -0.33
SMAD6-204ENST00000559931 SLC6A15Q9H2J7 730 aa13□□□□□ -0.33
SMAD6-204ENST00000559931 ZDHHC11Q9H8X9 412 aa13□□□□□ -0.33
SMAD6-204ENST00000559931 ACKR4Q9NPB9 350 aa13□□□□□ -0.33
SMAD6-204ENST00000559931 ACER3Q9NUN7 267 aa13□□□□□ -0.33
SMAD6-204ENST00000559931 CFAP46Q8IYW2 2715 aa13□□□□□ -0.33
SMAD6-204ENST00000559931 MED12Q93074 2177 aa12.99□□□□□ -0.33
SMAD6-204ENST00000559931 DHRS12A0PJE2 317 aa12.99□□□□□ -0.33
SMAD6-204ENST00000559931 hCG_2039718K7EN88 272 aa12.99□□□□□ -0.33
SMAD6-204ENST00000559931 FAAHO00519 579 aa12.99□□□□□ -0.33
SMAD6-204ENST00000559931 UMPSP11172 480 aa12.99□□□□□ -0.33
SMAD6-204ENST00000559931 ITGA2P17301 1181 aa12.99□□□□□ -0.33
SMAD6-204ENST00000559931 CXCR1P25024 350 aa12.99□□□□□ -0.33
SMAD6-204ENST00000559931 PSMA4P25789 261 aaKnown RBP12.99□□□□□ -0.33
SMAD6-204ENST00000559931 HTR2AP28223 471 aa12.99□□□□□ -0.33
SMAD6-204ENST00000559931 TACR3P29371 465 aa12.99□□□□□ -0.33
SMAD6-204ENST00000559931 HTR3AP46098 478 aa12.99□□□□□ -0.33
SMAD6-204ENST00000559931 FOXF1Q12946 379 aa12.99□□□□□ -0.33
SMAD6-204ENST00000559931 NPTX1Q15818 432 aa12.99□□□□□ -0.33
SMAD6-204ENST00000559931 KRTCAP3Q53RY4 240 aa12.99□□□□□ -0.33
SMAD6-204ENST00000559931 AAGABQ6PD74 315 aa12.99□□□□□ -0.33
SMAD6-204ENST00000559931 GRINAQ7Z429 371 aa12.99□□□□□ -0.33
SMAD6-204ENST00000559931 CPT1CQ8TCG5 803 aa12.99□□□□□ -0.33
SMAD6-204ENST00000559931 MRGPRX4Q96LA9 322 aa12.99□□□□□ -0.33
SMAD6-204ENST00000559931 AMBRA1Q9C0C7 1298 aa12.99□□□□□ -0.33
SMAD6-204ENST00000559931 SERINC1Q9NRX5 453 aa12.99□□□□□ -0.33
SMAD6-204ENST00000559931 STOML1Q9UBI4 398 aa12.99□□□□□ -0.33
SMAD6-204ENST00000559931 PRDM4Q9UKN5 801 aa12.99□□□□□ -0.33
SMAD6-204ENST00000559931 NBASA2RRP1 2371 aa12.98□□□□□ -0.33
SMAD6-204ENST00000559931 A0A1B0GWA3 101 aa12.98□□□□□ -0.33
SMAD6-204ENST00000559931 OR2M5A3KFT3 312 aa12.98□□□□□ -0.33
SMAD6-204ENST00000559931 ELOA3DA6NLF2 546 aaPredicted RBP12.98□□□□□ -0.33
SMAD6-204ENST00000559931 H3BML4 177 aa12.98□□□□□ -0.33
SMAD6-204ENST00000559931 TPST2O60704 377 aa12.98□□□□□ -0.33
SMAD6-204ENST00000559931 HCN1O60741 890 aa12.98□□□□□ -0.33
SMAD6-204ENST00000559931 FMO6PO60774 539 aa12.98□□□□□ -0.33
SMAD6-204ENST00000559931 FABP3P05413 133 aa12.98□□□□□ -0.33
SMAD6-204ENST00000559931 GPIP06744 558 aa12.98□□□□□ -0.33
SMAD6-204ENST00000559931 ADH6P28332 368 aa12.98□□□□□ -0.33
SMAD6-204ENST00000559931 APOBEC1P41238 236 aaKnown RBP12.98□□□□□ -0.33
SMAD6-204ENST00000559931 POLR2HP52434 150 aaKnown RBP12.98□□□□□ -0.33
SMAD6-204ENST00000559931 KPNB1Q14974 876 aaKnown RBP12.98□□□□□ -0.33
SMAD6-204ENST00000559931 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.98□□□□□ -0.33
SMAD6-204ENST00000559931 ELOA3BQ3SY89 546 aa12.98□□□□□ -0.33
SMAD6-204ENST00000559931 ULK3Q6PHR2 472 aa12.98□□□□□ -0.33
SMAD6-204ENST00000559931 TRILQ7L0X0 811 aa12.98□□□□□ -0.33
SMAD6-204ENST00000559931 ZDHHC21Q8IVQ6 265 aa12.98□□□□□ -0.33
SMAD6-204ENST00000559931 SIAH3Q8IW03 269 aa12.98□□□□□ -0.33
SMAD6-204ENST00000559931 C10orf67Q8IYJ2 551 aa12.98□□□□□ -0.33
SMAD6-204ENST00000559931 GTPBP8Q8N3Z3 284 aaPredicted RBP12.98□□□□□ -0.33
SMAD6-204ENST00000559931 LSMEM1Q8N8F7 131 aa12.98□□□□□ -0.33
SMAD6-204ENST00000559931 ELOA3Q8NG57 546 aa12.98□□□□□ -0.33
SMAD6-204ENST00000559931 NEIL3Q8TAT5 605 aa12.98□□□□□ -0.33
SMAD6-204ENST00000559931 CANT1Q8WVQ1 401 aa12.98□□□□□ -0.33
SMAD6-204ENST00000559931 DNAJA4Q8WW22 397 aaPredicted RBP12.98□□□□□ -0.33
SMAD6-204ENST00000559931 SMPDL3BQ92485 455 aa12.98□□□□□ -0.33
SMAD6-204ENST00000559931 ABTB1Q969K4 478 aaPredicted RBP12.98□□□□□ -0.33
SMAD6-204ENST00000559931 RELTQ969Z4 430 aa12.98□□□□□ -0.33
SMAD6-204ENST00000559931 ZNF524Q96C55 264 aa12.98□□□□□ -0.33
SMAD6-204ENST00000559931 GPR137Q96N19 417 aa12.98□□□□□ -0.33
SMAD6-204ENST00000559931 NPAS1Q99742 590 aa12.98□□□□□ -0.33
SMAD6-204ENST00000559931 FNDC11Q9BVV2 318 aa12.98□□□□□ -0.33
SMAD6-204ENST00000559931 MAGIXQ9H6Y5 334 aa12.98□□□□□ -0.33
SMAD6-204ENST00000559931 ZNF337Q9Y3M9 751 aa12.98□□□□□ -0.33
SMAD6-204ENST00000559931 LIPGQ9Y5X9 500 aa12.98□□□□□ -0.33
SMAD6-204ENST00000559931 ENPP4Q9Y6X5 453 aa12.98□□□□□ -0.33
SMAD6-204ENST00000559931 GTF3C1Q12789 2109 aa12.98□□□□□ -0.33
SMAD6-204ENST00000559931 RP1L1Q8IWN7 2480 aaPredicted RBP12.97□□□□□ -0.33
SMAD6-204ENST00000559931 TMED7-TICAM2A0A0A6YYA0 188 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms