RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 BEX5Q5H9J7 111 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 ANKRD26P1Q6NSI1 321 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 NOXRED1Q6NXP6 359 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 ZNF704Q6ZNC4 412 aaPredicted RBP5.16□□□□□ -1.58
USP3-215ENST00000559771 DNM1P46Q6ZS02 220 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 Q6ZSR9 355 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 FRMD7Q6ZUT3 714 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 PLEKHM3Q6ZWE6 761 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 CHMP1BQ7LBR1 199 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 C4orf33Q8N1A6 199 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 GABRG1Q8N1C3 465 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 GTPBP8Q8N3Z3 284 aaPredicted RBP5.16□□□□□ -1.58
USP3-215ENST00000559771 ZNF611Q8N823 705 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 GATSQ8NAP1 163 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 SLC16A11Q8NCK7 471 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 MAPK1IP1LQ8NDC0 245 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 OR6K3Q8NGY3 331 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 OR2T11Q8NH01 316 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 CDC26Q8NHZ8 85 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 C10orf82Q8WW14 230 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 STON2Q8WXE9 905 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 SLC9A6Q92581 669 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 NEUROG1Q92886 237 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 PLPPR2Q96GM1 343 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 C16orf58Q96GQ5 468 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 GMPPAQ96IJ6 420 aaPredicted RBP5.16□□□□□ -1.58
USP3-215ENST00000559771 FCRL1Q96LA6 429 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 BBS4Q96RK4 519 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 SRXN1Q9BYN0 137 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 SHCBP1LQ9BZQ2 653 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 MMADHCQ9H3L0 296 aaPredicted RBP5.16□□□□□ -1.58
USP3-215ENST00000559771 TUBB1Q9H4B7 451 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 PTGES2Q9H7Z7 377 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 Q9N2J8 555 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 MID1IP1Q9NPA3 183 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 SDHAF3Q9NRP4 125 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 SIRT3Q9NTG7 399 aaPredicted RBP5.16□□□□□ -1.58
USP3-215ENST00000559771 GIMAP4Q9NUV9 329 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 MED17Q9NVC6 651 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 DDX18Q9NVP1 670 aaKnown RBP5.16□□□□□ -1.58
USP3-215ENST00000559771 THAP1Q9NVV9 213 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 MID2Q9UJV3 735 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 ING1Q9UK53 422 aaPredicted RBP5.16□□□□□ -1.58
USP3-215ENST00000559771 VDAC3Q9Y277 283 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 FREM1Q5H8C1 2179 aa5.16□□□□□ -1.58
USP3-215ENST00000559771 CHD3Q12873 2000 aaKnown RBP5.16□□□□□ -1.58
USP3-215ENST00000559771 USF3Q68DE3 2245 aa5.15□□□□□ -1.58
USP3-215ENST00000559771 TNFSF11O14788 317 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 HS3ST1O14792 307 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 TBX19O60806 448 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 GLRA3O75311 464 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 CRLF1O75462 422 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 RSL1D1O76021 490 aaKnown RBP5.15□□□□□ -1.59
USP3-215ENST00000559771 KCNK2O95069 426 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 ATP6V1G2O95670 118 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 CD8AP01732 235 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 SOD3P08294 240 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 PRPS2P11908 318 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 NEFHP12036 1026 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 FCGR2AP12318 317 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 PPP3CBP16298 524 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 SDC1P18827 310 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 PSMB1P20618 241 aaKnown RBP5.15□□□□□ -1.59
USP3-215ENST00000559771 CALB2P22676 271 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 AGTR1P30556 359 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 PRIM2P49643 509 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 ARFIP2P53365 341 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 HSPB3Q12988 150 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 FGFBP1Q14512 234 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 DUSP5Q16690 384 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 CCDC153Q494R4 210 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 RFTN2Q52LD8 501 aaPredicted RBP5.15□□□□□ -1.59
USP3-215ENST00000559771 CCNJQ5T5M9 372 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 CPTPQ5TA50 214 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 CLEC6AQ6EIG7 209 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 CGB2Q6NT52 195 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 ADAM5Q6NVV9 412 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 CBLN3Q6UW01 205 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 TFAP2EQ6VUC0 442 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 ZYG11AQ6WRX3 759 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 IKBIPQ70UQ0 350 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 CXXC5Q7LFL8 322 aaKnown RBP5.15□□□□□ -1.59
USP3-215ENST00000559771 NUFIP2Q7Z417 695 aaKnown RBP5.15□□□□□ -1.59
USP3-215ENST00000559771 LSRQ86X29 649 aaPredicted RBP5.15□□□□□ -1.59
USP3-215ENST00000559771 SLC22A9Q8IVM8 553 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 KIRREL3Q8IZU9 778 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 ARHGAP24Q8N264 748 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 CCNYL1Q8N7R7 359 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 SPATA3Q8NHX4 192 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 FBXO30Q8TB52 745 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 GPR151Q8TDV0 419 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 ACTRT2Q8TDY3 377 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 RNF128Q8TEB7 428 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 ABHD3Q8WU67 409 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 ROBO4Q8WZ75 1007 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 GFM2Q969S9 779 aaKnown RBP5.15□□□□□ -1.59
USP3-215ENST00000559771 S100PBPQ96BU1 408 aa5.15□□□□□ -1.59
USP3-215ENST00000559771 OTUB1Q96FW1 271 aaPredicted RBP5.15□□□□□ -1.59
USP3-215ENST00000559771 ZNF764Q96H86 408 aaPredicted RBP5.15□□□□□ -1.59
USP3-215ENST00000559771 RNF145Q96MT1 663 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms