RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 OR4K5Q8NGD3 323 aa9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 SGTBQ96EQ0 304 aa9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 SNX18Q96RF0 628 aa9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 TMEM121BQ9BXQ6 578 aaPredicted RBP9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 QRSL1Q9H0R6 528 aaKnown RBP9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 DDX31Q9H8H2 851 aaKnown RBP9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 GORASP2Q9H8Y8 452 aa9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 EXTL2Q9UBQ6 330 aa9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 SH2B3Q9UQQ2 575 aa9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 FAM25EA8MYX2 175 aa9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 CTSVO60911 334 aa9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 UBL4AP11441 157 aa9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 CELP19835 753 aa9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 TNFSF8P32971 234 aa9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 FAUP35544 74 aaKnown RBP9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 PIGAP37287 484 aa9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 GPR4P46093 362 aa9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 OMPP47874 163 aa9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 CASP6P55212 293 aa9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 DMWDQ09019 674 aa9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 FAM53BQ14153 422 aa9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 PUM1Q14671 1186 aaKnown RBP eCLIP9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 TMPRSS9Q7Z410 1059 aa9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 RPS19BP1Q86WX3 136 aaKnown RBP9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 DTX3Q8N9I9 347 aa9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 WDR20Q8TBZ3 569 aa9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 SFXN5Q8TD22 340 aa9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 DUSP19Q8WTR2 217 aa9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 PPP1R14AQ96A00 147 aa9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 HS6ST2Q96MM7 605 aa9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 ZNF559Q9BR84 538 aa9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 RANGRFQ9HD47 186 aaPredicted RBP9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 RABL2BQ9UNT1 228 aa9.91□□□□□ -0.82
CARMIL3-202ENST00000559694 CACNA1CQ13936 2221 aa9.9□□□□□ -0.82
CARMIL3-202ENST00000559694 A0A1W2PQ09 198 aa9.9□□□□□ -0.82
CARMIL3-202ENST00000559694 SLC35F4A4IF30 521 aa9.9□□□□□ -0.82
CARMIL3-202ENST00000559694 HRO43593 1189 aa9.9□□□□□ -0.82
CARMIL3-202ENST00000559694 ANXA3P12429 323 aa9.9□□□□□ -0.82
CARMIL3-202ENST00000559694 CTBP2P56545 445 aa9.9□□□□□ -0.82
CARMIL3-202ENST00000559694 AP3S2P59780 193 aa9.9□□□□□ -0.82
CARMIL3-202ENST00000559694 LINGO2Q7L985 606 aa9.9□□□□□ -0.82
CARMIL3-202ENST00000559694 VRK2Q86Y07 508 aa9.9□□□□□ -0.82
CARMIL3-202ENST00000559694 KLHL36Q8N4N3 616 aa9.9□□□□□ -0.82
CARMIL3-202ENST00000559694 GNPDA2Q8TDQ7 276 aa9.9□□□□□ -0.82
CARMIL3-202ENST00000559694 OSTF1Q92882 214 aa9.9□□□□□ -0.82
CARMIL3-202ENST00000559694 TSLPQ969D9 159 aa9.9□□□□□ -0.82
CARMIL3-202ENST00000559694 ABCG5Q9H222 651 aa9.9□□□□□ -0.82
CARMIL3-202ENST00000559694 MED11Q9P086 117 aa9.9□□□□□ -0.82
CARMIL3-202ENST00000559694 CLDN24A6NM45 220 aa9.9□□□□□ -0.82
CARMIL3-202ENST00000559694 FAAHO00519 579 aa9.9□□□□□ -0.82
CARMIL3-202ENST00000559694 FOLR1P15328 257 aa9.9□□□□□ -0.82
CARMIL3-202ENST00000559694 DNASE1P24855 282 aa9.9□□□□□ -0.82
CARMIL3-202ENST00000559694 MAGEA2P43356 314 aa9.9□□□□□ -0.82
CARMIL3-202ENST00000559694 NRMQ8IXM6 262 aa9.9□□□□□ -0.82
CARMIL3-202ENST00000559694 SIRT6Q8N6T7 355 aa9.9□□□□□ -0.82
CARMIL3-202ENST00000559694 SETD6Q8TBK2 473 aa9.9□□□□□ -0.82
CARMIL3-202ENST00000559694 MVB12AQ96EY5 273 aa9.9□□□□□ -0.82
CARMIL3-202ENST00000559694 LCORQ96JN0 433 aaPredicted RBP9.9□□□□□ -0.82
CARMIL3-202ENST00000559694 SLC46A1Q96NT5 459 aa9.9□□□□□ -0.82
CARMIL3-202ENST00000559694 UTP23Q9BRU9 249 aaKnown RBP9.9□□□□□ -0.82
CARMIL3-202ENST00000559694 UBQLN2Q9UHD9 624 aa9.9□□□□□ -0.82
CARMIL3-202ENST00000559694 IL20RAQ9UHF4 553 aa9.9□□□□□ -0.82
CARMIL3-202ENST00000559694 FARSAQ9Y285 508 aaKnown RBP9.9□□□□□ -0.82
CARMIL3-202ENST00000559694 MGAMO43451 1857 aa9.9□□□□□ -0.82
CARMIL3-202ENST00000559694 SPTBP11277 2137 aa9.9□□□□□ -0.82
CARMIL3-202ENST00000559694 BDP1A6H8Y1 2624 aa9.9□□□□□ -0.83
CARMIL3-202ENST00000559694 PROM1O43490 865 aa9.9□□□□□ -0.83
CARMIL3-202ENST00000559694 TNFSF14O43557 240 aa9.9□□□□□ -0.83
CARMIL3-202ENST00000559694 NR2C1P13056 603 aa9.9□□□□□ -0.83
CARMIL3-202ENST00000559694 CD46P15529 392 aa9.9□□□□□ -0.83
CARMIL3-202ENST00000559694 GDF1P27539 372 aa9.9□□□□□ -0.83
CARMIL3-202ENST00000559694 TGFBR2P37173 567 aa9.9□□□□□ -0.83
CARMIL3-202ENST00000559694 RGS6P49758 472 aa9.9□□□□□ -0.83
CARMIL3-202ENST00000559694 TSPAN5P62079 268 aa9.9□□□□□ -0.83
CARMIL3-202ENST00000559694 PPP3R1P63098 170 aa9.9□□□□□ -0.83
CARMIL3-202ENST00000559694 PPP2R2BQ00005 443 aa9.9□□□□□ -0.83
CARMIL3-202ENST00000559694 RUNX2Q13950 521 aa9.9□□□□□ -0.83
CARMIL3-202ENST00000559694 ELAVL1Q15717 326 aaKnown RBP9.9□□□□□ -0.83
CARMIL3-202ENST00000559694 CARD17Q5XLA6 110 aa9.9□□□□□ -0.83
CARMIL3-202ENST00000559694 PGBD2Q6P3X8 592 aa9.9□□□□□ -0.83
CARMIL3-202ENST00000559694 ARL9Q6T311 187 aa9.9□□□□□ -0.83
CARMIL3-202ENST00000559694 OLIG3Q7RTU3 272 aa9.9□□□□□ -0.83
CARMIL3-202ENST00000559694 BPHLQ86WA6 291 aaPredicted RBP9.9□□□□□ -0.83
CARMIL3-202ENST00000559694 CCDC120Q96HB5 630 aa9.9□□□□□ -0.83
CARMIL3-202ENST00000559694 RANBP3Q9H6Z4 567 aaPredicted RBP9.9□□□□□ -0.83
CARMIL3-202ENST00000559694 TDRD6O60522 2096 aaKnown RBP9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 OR2A25A4D2G3 310 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 DSCR3O14972 297 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 MRPS14O60783 128 aaKnown RBP9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 CAPNS1P04632 268 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 LCN1P31025 176 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 FASLGP48023 281 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 SLC6A9P48067 706 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 FAM199XQ6PEV8 388 aaPredicted RBP9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 KIF18BQ86Y91 864 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 SLC38A5Q8WUX1 472 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 SGCDQ92629 289 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 PNPLA2Q96AD5 504 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 SLC41A3Q96GZ6 507 aa9.89□□□□□ -0.83
CARMIL3-202ENST00000559694 GON7Q9BXV9 100 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms