RNA–Protein interactions for RNA: ENST00000558954.5

RABGGTA-208, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-208ENST00000558954 TRIB1Q96RU8 372 aa17.02■□□□□ 0.32
RABGGTA-208ENST00000558954 CALHM2Q9HA72 323 aa17.02■□□□□ 0.32
RABGGTA-208ENST00000558954 RLIMQ9NVW2 624 aa17.02■□□□□ 0.32
RABGGTA-208ENST00000558954 AP3M1Q9Y2T2 418 aa17.02■□□□□ 0.32
RABGGTA-208ENST00000558954 PRORSD1PA6NEY8 169 aa17.01■□□□□ 0.31
RABGGTA-208ENST00000558954 GJE1A6NN92 205 aa17.01■□□□□ 0.31
RABGGTA-208ENST00000558954 CLCA1A8K7I4 914 aa17.01■□□□□ 0.31
RABGGTA-208ENST00000558954 FAAHO00519 579 aa17.01■□□□□ 0.31
RABGGTA-208ENST00000558954 GP1BBP13224 206 aa17.01■□□□□ 0.31
RABGGTA-208ENST00000558954 CLDN20P56880 219 aa17.01■□□□□ 0.31
RABGGTA-208ENST00000558954 PCBP3P57721 371 aaKnown RBP17.01■□□□□ 0.31
RABGGTA-208ENST00000558954 SESN3P58005 492 aa17.01■□□□□ 0.31
RABGGTA-208ENST00000558954 RPS3AP61247 264 aaKnown RBP17.01■□□□□ 0.31
RABGGTA-208ENST00000558954 VMACQ2NL98 169 aa17.01■□□□□ 0.31
RABGGTA-208ENST00000558954 RIPPLY2Q5TAB7 128 aa17.01■□□□□ 0.31
RABGGTA-208ENST00000558954 FAM91A1Q658Y4 838 aa17.01■□□□□ 0.31
RABGGTA-208ENST00000558954 C3orf33Q6P1S2 294 aa17.01■□□□□ 0.31
RABGGTA-208ENST00000558954 ERICH5Q6P6B1 374 aa17.01■□□□□ 0.31
RABGGTA-208ENST00000558954 ZNF550Q7Z398 422 aa17.01■□□□□ 0.31
RABGGTA-208ENST00000558954 GGNQ86UU5 652 aa17.01■□□□□ 0.31
RABGGTA-208ENST00000558954 ARMC8Q8IUR7 673 aa17.01■□□□□ 0.31
RABGGTA-208ENST00000558954 OR10Q1Q8NGQ4 319 aa17.01■□□□□ 0.31
RABGGTA-208ENST00000558954 SLC35B4Q969S0 331 aa17.01■□□□□ 0.31
RABGGTA-208ENST00000558954 HOPXQ9BPY8 73 aaPredicted RBP17.01■□□□□ 0.31
RABGGTA-208ENST00000558954 TMEM185BQ9H7F4 350 aa17.01■□□□□ 0.31
RABGGTA-208ENST00000558954 ACER3Q9NUN7 267 aa17.01■□□□□ 0.31
RABGGTA-208ENST00000558954 CLCF1Q9UBD9 225 aa17.01■□□□□ 0.31
RABGGTA-208ENST00000558954 MBD3L4A6NDZ8 208 aaPredicted RBP17■□□□□ 0.31
RABGGTA-208ENST00000558954 MBD3L3A6NE82 208 aaPredicted RBP17■□□□□ 0.31
RABGGTA-208ENST00000558954 MBD3L5A6NJ08 208 aaPredicted RBP17■□□□□ 0.31
RABGGTA-208ENST00000558954 FAM220BPB1ANY3 271 aa17■□□□□ 0.31
RABGGTA-208ENST00000558954 AP3D1O14617 1153 aa17■□□□□ 0.31
RABGGTA-208ENST00000558954 ADAM11O75078 769 aa17■□□□□ 0.31
RABGGTA-208ENST00000558954 TIMP3P35625 211 aa17■□□□□ 0.31
RABGGTA-208ENST00000558954 GZMMP51124 257 aa17■□□□□ 0.31
RABGGTA-208ENST00000558954 DLX5P56178 289 aa17■□□□□ 0.31
RABGGTA-208ENST00000558954 MERTKQ12866 999 aa17■□□□□ 0.31
RABGGTA-208ENST00000558954 EPS8Q12929 822 aa17■□□□□ 0.31
RABGGTA-208ENST00000558954 DHRS4L2Q6PKH6 230 aa17■□□□□ 0.31
RABGGTA-208ENST00000558954 ESPNLQ6ZVH7 1005 aa17■□□□□ 0.31
RABGGTA-208ENST00000558954 GRINAQ7Z429 371 aa17■□□□□ 0.31
RABGGTA-208ENST00000558954 ADGRE4PQ86SQ3 457 aa17■□□□□ 0.31
RABGGTA-208ENST00000558954 PATL1Q86TB9 770 aaKnown RBP17■□□□□ 0.31
RABGGTA-208ENST00000558954 CALHM3Q86XJ0 350 aa17■□□□□ 0.31
RABGGTA-208ENST00000558954 LILRA2Q8N149 483 aa17■□□□□ 0.31
RABGGTA-208ENST00000558954 CLIP4Q8N3C7 705 aa17■□□□□ 0.31
RABGGTA-208ENST00000558954 MBD3L2Q8NHZ7 208 aaPredicted RBP17■□□□□ 0.31
RABGGTA-208ENST00000558954 ASB5Q8WWX0 329 aa17■□□□□ 0.31
RABGGTA-208ENST00000558954 ZNF524Q96C55 264 aa17■□□□□ 0.31
RABGGTA-208ENST00000558954 SDCCAG3Q96C92 435 aa17■□□□□ 0.31
RABGGTA-208ENST00000558954 UCN2Q96RP3 112 aa17■□□□□ 0.31
RABGGTA-208ENST00000558954 GPATCH1Q9BRR8 931 aaKnown RBP17■□□□□ 0.31
RABGGTA-208ENST00000558954 PIF1Q9H611 641 aa17■□□□□ 0.31
RABGGTA-208ENST00000558954 PRDM4Q9UKN5 801 aa17■□□□□ 0.31
RABGGTA-208ENST00000558954 NDUFAB1O14561 156 aa16.99■□□□□ 0.31
RABGGTA-208ENST00000558954 EIF1AYO14602 144 aaKnown RBP16.99■□□□□ 0.31
RABGGTA-208ENST00000558954 IL2RAP01589 272 aa16.99■□□□□ 0.31
RABGGTA-208ENST00000558954 IL11P20809 199 aa16.99■□□□□ 0.31
RABGGTA-208ENST00000558954 CHRNB4P30926 498 aa16.99■□□□□ 0.31
RABGGTA-208ENST00000558954 SFTPDP35247 375 aa16.99■□□□□ 0.31
RABGGTA-208ENST00000558954 HTR3AP46098 478 aa16.99■□□□□ 0.31
RABGGTA-208ENST00000558954 IDH2P48735 452 aaKnown RBP16.99■□□□□ 0.31
RABGGTA-208ENST00000558954 SUCLG1P53597 346 aaKnown RBP16.99■□□□□ 0.31
RABGGTA-208ENST00000558954 CLDN15P56746 228 aa16.99■□□□□ 0.31
RABGGTA-208ENST00000558954 C8orf82Q6P1X6 216 aaPredicted RBP16.99■□□□□ 0.31
RABGGTA-208ENST00000558954 SEM1Q6ZVN7 128 aa16.99■□□□□ 0.31
RABGGTA-208ENST00000558954 PLEKHM3Q6ZWE6 761 aa16.99■□□□□ 0.31
RABGGTA-208ENST00000558954 OR2T12Q8NG77 320 aa16.99■□□□□ 0.31
RABGGTA-208ENST00000558954 SLC25A43Q8WUT9 341 aaPredicted RBP16.99■□□□□ 0.31
RABGGTA-208ENST00000558954 KLHL15Q96M94 604 aa16.99■□□□□ 0.31
RABGGTA-208ENST00000558954 ZFP3Q96NJ6 502 aa16.99■□□□□ 0.31
RABGGTA-208ENST00000558954 TM9SF2Q99805 663 aa16.99■□□□□ 0.31
RABGGTA-208ENST00000558954 PINK1Q9BXM7 581 aa16.99■□□□□ 0.31
RABGGTA-208ENST00000558954 SERINC1Q9NRX5 453 aa16.99■□□□□ 0.31
RABGGTA-208ENST00000558954 PAQR5Q9NXK6 330 aaPredicted RBP16.99■□□□□ 0.31
RABGGTA-208ENST00000558954 TAGLN3Q9UI15 199 aa16.99■□□□□ 0.31
RABGGTA-208ENST00000558954 SLC13A4Q9UKG4 626 aa16.99■□□□□ 0.31
RABGGTA-208ENST00000558954 RNF6Q9Y252 685 aa16.99■□□□□ 0.31
RABGGTA-208ENST00000558954 CHST2Q9Y4C5 530 aa16.99■□□□□ 0.31
RABGGTA-208ENST00000558954 SPIN1Q9Y657 262 aaPredicted RBP16.99■□□□□ 0.31
RABGGTA-208ENST00000558954 A0A0G2JNJ9 132 aa16.98■□□□□ 0.31
RABGGTA-208ENST00000558954 SLC22A20A6NK97 555 aa16.98■□□□□ 0.31
RABGGTA-208ENST00000558954 HSPB2A8KAH6 182 aa16.98■□□□□ 0.31
RABGGTA-208ENST00000558954 KDM4EB2RXH2 506 aaPredicted RBP16.98■□□□□ 0.31
RABGGTA-208ENST00000558954 H0YC42 278 aa16.98■□□□□ 0.31
RABGGTA-208ENST00000558954 ADAMDEC1O15204 470 aa16.98■□□□□ 0.31
RABGGTA-208ENST00000558954 GKN3PP0CG01 181 aa16.98■□□□□ 0.31
RABGGTA-208ENST00000558954 FCGR2AP12318 317 aa16.98■□□□□ 0.31
RABGGTA-208ENST00000558954 SLC7A1P30825 629 aa16.98■□□□□ 0.31
RABGGTA-208ENST00000558954 APOBEC1P41238 236 aaKnown RBP16.98■□□□□ 0.31
RABGGTA-208ENST00000558954 EIF1AXP47813 144 aaKnown RBP16.98■□□□□ 0.31
RABGGTA-208ENST00000558954 SLC7A2P52569 658 aa16.98■□□□□ 0.31
RABGGTA-208ENST00000558954 TPD52P55327 224 aaPredicted RBP16.98■□□□□ 0.31
RABGGTA-208ENST00000558954 COPZ1P61923 177 aa16.98■□□□□ 0.31
RABGGTA-208ENST00000558954 HSPB2Q16082 182 aa16.98■□□□□ 0.31
RABGGTA-208ENST00000558954 SGCBQ16585 318 aa16.98■□□□□ 0.31
RABGGTA-208ENST00000558954 CTU2Q2VPK5 515 aaKnown RBP16.98■□□□□ 0.31
RABGGTA-208ENST00000558954 PDSS1Q5T2R2 415 aa16.98■□□□□ 0.31
RABGGTA-208ENST00000558954 POMZP3Q6PJE2 187 aa16.98■□□□□ 0.31
RABGGTA-208ENST00000558954 SLC15A3Q8IY34 581 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms