RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 KIAA0513O60268 411 aa12.01□□□□□ -0.49
VPS18-203ENST00000558855 EIF4E2O60573 245 aaKnown RBP12.01□□□□□ -0.49
VPS18-203ENST00000558855 CPSF4O95639 269 aaKnown RBP12.01□□□□□ -0.49
VPS18-203ENST00000558855 ADAP00813 363 aa12.01□□□□□ -0.49
VPS18-203ENST00000558855 SOD3P08294 240 aa12.01□□□□□ -0.49
VPS18-203ENST00000558855 DDX5P17844 614 aaKnown RBP12.01□□□□□ -0.49
VPS18-203ENST00000558855 FPR1P21462 350 aa12.01□□□□□ -0.49
VPS18-203ENST00000558855 PGM1P36871 562 aa12.01□□□□□ -0.49
VPS18-203ENST00000558855 CDKN2CP42773 168 aa12.01□□□□□ -0.49
VPS18-203ENST00000558855 FOXG1P55316 489 aaPredicted RBP12.01□□□□□ -0.49
VPS18-203ENST00000558855 NME5P56597 212 aa12.01□□□□□ -0.49
VPS18-203ENST00000558855 SESN3P58005 492 aa12.01□□□□□ -0.49
VPS18-203ENST00000558855 TIGD2Q4W5G0 525 aa12.01□□□□□ -0.49
VPS18-203ENST00000558855 SFRP5Q5T4F7 317 aa12.01□□□□□ -0.49
VPS18-203ENST00000558855 SAXO2Q658L1 398 aa12.01□□□□□ -0.49
VPS18-203ENST00000558855 PLEKHM3Q6ZWE6 761 aa12.01□□□□□ -0.49
VPS18-203ENST00000558855 KBTBD8Q8NFY9 601 aa12.01□□□□□ -0.49
VPS18-203ENST00000558855 OR8J2Q8NGG1 315 aa12.01□□□□□ -0.49
VPS18-203ENST00000558855 MIPOL1Q8TD10 442 aa12.01□□□□□ -0.49
VPS18-203ENST00000558855 AKAP1Q92667 903 aaKnown RBP eCLIP12.01□□□□□ -0.49
VPS18-203ENST00000558855 OR5B2Q96R09 309 aa12.01□□□□□ -0.49
VPS18-203ENST00000558855 INPP5KQ9BT40 448 aa12.01□□□□□ -0.49
VPS18-203ENST00000558855 GSX2Q9BZM3 304 aa12.01□□□□□ -0.49
VPS18-203ENST00000558855 LAT2Q9GZY6 243 aa12.01□□□□□ -0.49
VPS18-203ENST00000558855 HOXD1Q9GZZ0 328 aa12.01□□□□□ -0.49
VPS18-203ENST00000558855 BCO1Q9HAY6 547 aa12.01□□□□□ -0.49
VPS18-203ENST00000558855 NPAP1Q9NZP6 1156 aa12.01□□□□□ -0.49
VPS18-203ENST00000558855 STOML1Q9UBI4 398 aa12.01□□□□□ -0.49
VPS18-203ENST00000558855 HAO1Q9UJM8 370 aa12.01□□□□□ -0.49
VPS18-203ENST00000558855 GPR52Q9Y2T5 361 aa12.01□□□□□ -0.49
VPS18-203ENST00000558855 RAP2CQ9Y3L5 183 aa12.01□□□□□ -0.49
VPS18-203ENST00000558855 UQCRHLA0A096LP55 91 aa12□□□□□ -0.49
VPS18-203ENST00000558855 DPRXA6NFQ7 191 aa12□□□□□ -0.49
VPS18-203ENST00000558855 SDHDO14521 159 aa12□□□□□ -0.49
VPS18-203ENST00000558855 AP3D1O14617 1153 aa12□□□□□ -0.49
VPS18-203ENST00000558855 LYZL6O75951 148 aa12□□□□□ -0.49
VPS18-203ENST00000558855 CSTAP01040 98 aa12□□□□□ -0.49
VPS18-203ENST00000558855 FESP07332 822 aa12□□□□□ -0.49
VPS18-203ENST00000558855 KRT16P08779 473 aa12□□□□□ -0.49
VPS18-203ENST00000558855 PPP3CBP16298 524 aa12□□□□□ -0.49
VPS18-203ENST00000558855 SLC1A6P48664 564 aa12□□□□□ -0.49
VPS18-203ENST00000558855 UFM1P61960 85 aa12□□□□□ -0.49
VPS18-203ENST00000558855 CASP8Q14790 479 aa12□□□□□ -0.49
VPS18-203ENST00000558855 RNPS1Q15287 305 aaKnown RBP12□□□□□ -0.49
VPS18-203ENST00000558855 MAPK11Q15759 364 aa12□□□□□ -0.49
VPS18-203ENST00000558855 TMEM201Q5SNT2 666 aa12□□□□□ -0.49
VPS18-203ENST00000558855 NCMAPQ5T1S8 102 aa12□□□□□ -0.49
VPS18-203ENST00000558855 PDSS1Q5T2R2 415 aa12□□□□□ -0.49
VPS18-203ENST00000558855 ABLIM2Q6H8Q1 611 aa12□□□□□ -0.49
VPS18-203ENST00000558855 NATD1Q8N6N6 113 aa12□□□□□ -0.49
VPS18-203ENST00000558855 ZNF611Q8N823 705 aa12□□□□□ -0.49
VPS18-203ENST00000558855 TOR1AIP2Q8NFQ8 470 aa12□□□□□ -0.49
VPS18-203ENST00000558855 MOAP1Q96BY2 351 aa12□□□□□ -0.49
VPS18-203ENST00000558855 ARL5BQ96KC2 179 aa12□□□□□ -0.49
VPS18-203ENST00000558855 ZIM3Q96PE6 472 aa12□□□□□ -0.49
VPS18-203ENST00000558855 PRPF18Q99633 342 aaKnown RBP12□□□□□ -0.49
VPS18-203ENST00000558855 PARD6BQ9BYG5 372 aa12□□□□□ -0.49
VPS18-203ENST00000558855 DPY30Q9C005 99 aa12□□□□□ -0.49
VPS18-203ENST00000558855 OR11A1Q9GZK7 315 aa12□□□□□ -0.49
VPS18-203ENST00000558855 CTPS2Q9NRF8 586 aa12□□□□□ -0.49
VPS18-203ENST00000558855 SLC6A13Q9NSD5 602 aa12□□□□□ -0.49
VPS18-203ENST00000558855 ZNF701Q9NV72 531 aaPredicted RBP12□□□□□ -0.49
VPS18-203ENST00000558855 H3BNH8 94 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 ARHGEF9O43307 516 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 CYTIPO60759 359 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 NDUFS7O75251 213 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 STX11O75558 287 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 PRKD3O94806 890 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 CNOT4O95628 575 aaKnown RBP11.99□□□□□ -0.49
VPS18-203ENST00000558855 IGHV3-9P01782 118 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 YES1P07947 543 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 CHRM4P08173 479 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 DANCRP0C864 163 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 PAX1P15863 534 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 PTNP21246 168 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 IGHV1-2P23083 117 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 SLC7A1P30825 629 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 CDKN1AP38936 164 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 OR3A2P47893 321 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 DIO1P49895 249 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 WDR4P57081 412 aaKnown RBP11.99□□□□□ -0.49
VPS18-203ENST00000558855 RAC3P60763 192 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 CHRNEQ04844 493 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 BST1Q10588 318 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 MERTKQ12866 999 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 CBFBQ13951 182 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 SYPL1Q16563 259 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 SMU1Q2TAY7 513 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 COX20Q5RI15 118 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 C3orf33Q6P1S2 294 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 PRSS57Q6UWY2 283 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 STK32CQ86UX6 486 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 ANKFN1Q8N957 763 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 MAPK1IP1LQ8NDC0 245 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 XAGE5Q8WWM1 108 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 CNOT9Q92600 299 aaKnown RBP11.99□□□□□ -0.49
VPS18-203ENST00000558855 TESCQ96BS2 214 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 ROPN1LQ96C74 230 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 NEURL3Q96EH8 262 aa11.99□□□□□ -0.49
VPS18-203ENST00000558855 CCDC106Q9BWC9 280 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms